BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00051333
         (1035 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polyme...   236   3e-59
ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polyme...   236   3e-59
ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polyme...   229   3e-57
ref|XP_009385773.1| PREDICTED: probable RNA-dependent RNA polyme...   228   5e-57
ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polyme...   228   5e-57
ref|XP_010916733.1| PREDICTED: probable RNA-dependent RNA polyme...   224   6e-56
ref|XP_008791538.1| PREDICTED: probable RNA-dependent RNA polyme...   220   1e-54
ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polyme...   220   1e-54
ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polyme...   207   8e-51
ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polyme...   207   8e-51
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme...   191   7e-46
ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polyme...   189   2e-45
ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polyme...   189   2e-45
gb|KHN40391.1| Putative RNA-dependent RNA polymerase 5 [Glycine ...   189   3e-45
gb|KDO66531.1| hypothetical protein CISIN_1g001771mg [Citrus sin...   187   8e-45
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...   187   8e-45
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr...   187   8e-45
ref|XP_012076892.1| PREDICTED: probable RNA-dependent RNA polyme...   187   1e-44
ref|XP_012076891.1| PREDICTED: probable RNA-dependent RNA polyme...   187   1e-44
ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polyme...   186   2e-44

>ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Vitis
            vinifera]
          Length = 954

 Score =  236 bits (601), Expect = 3e-59
 Identities = 132/264 (50%), Positives = 169/264 (64%)
 Frame = +3

Query: 222  QTPLPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKIHNLSALIM 401
            +  LP  VE+M+Q+IC EQ    P+   R  L+SLG+E +L+LL++IS  KI NLSALI 
Sbjct: 2    EVSLPHSVEQMLQRICTEQQQPPPEAHTRRNLASLGEESTLELLRKISHLKIRNLSALIN 61

Query: 402  HIVKRDDNASNRGSARSSDSRFTQASENIQYESGSSRSSPKKPWTQIASPQMLALGEFEF 581
            ++V         G A   D+     S   ++   S  S+PKK   Q +SPQ++ALGE EF
Sbjct: 62   YMV---------GKAAQGDA--ASHSPTPKHLISSPSSTPKKARRQASSPQLVALGELEF 110

Query: 582  RKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVWKTVGSHCISEELRIKGLDWE 761
            RK FLILSY+G KR ED+LS E I KLK LPM  FE +VW  +G   I EE R +  DW+
Sbjct: 111  RKAFLILSYIGDKRPEDLLSAEEILKLKNLPMGVFETEVWNNLGRKFIKEEDRQRSFDWD 170

Query: 762  SNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENVLNVRFADDAIDKKNSALSLD 941
            S+ TH+Y C V  +G   FKGPYL KTRTHLQRVLGDEN+L V+FA+D  D+ +   S D
Sbjct: 171  SDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTD 230

Query: 942  HRYPSFYDLAKEGILVGLRLYRFF 1013
                S+  +A+EGI VGLR YRFF
Sbjct: 231  SN-ASYNKIAREGIFVGLRQYRFF 253


>ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Vitis
            vinifera] gi|297738765|emb|CBI28010.3| unnamed protein
            product [Vitis vinifera]
          Length = 929

 Score =  236 bits (601), Expect = 3e-59
 Identities = 132/264 (50%), Positives = 169/264 (64%)
 Frame = +3

Query: 222  QTPLPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKIHNLSALIM 401
            +  LP  VE+M+Q+IC EQ    P+   R  L+SLG+E +L+LL++IS  KI NLSALI 
Sbjct: 2    EVSLPHSVEQMLQRICTEQQQPPPEAHTRRNLASLGEESTLELLRKISHLKIRNLSALIN 61

Query: 402  HIVKRDDNASNRGSARSSDSRFTQASENIQYESGSSRSSPKKPWTQIASPQMLALGEFEF 581
            ++V         G A   D+     S   ++   S  S+PKK   Q +SPQ++ALGE EF
Sbjct: 62   YMV---------GKAAQGDA--ASHSPTPKHLISSPSSTPKKARRQASSPQLVALGELEF 110

Query: 582  RKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVWKTVGSHCISEELRIKGLDWE 761
            RK FLILSY+G KR ED+LS E I KLK LPM  FE +VW  +G   I EE R +  DW+
Sbjct: 111  RKAFLILSYIGDKRPEDLLSAEEILKLKNLPMGVFETEVWNNLGRKFIKEEDRQRSFDWD 170

Query: 762  SNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENVLNVRFADDAIDKKNSALSLD 941
            S+ TH+Y C V  +G   FKGPYL KTRTHLQRVLGDEN+L V+FA+D  D+ +   S D
Sbjct: 171  SDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTD 230

Query: 942  HRYPSFYDLAKEGILVGLRLYRFF 1013
                S+  +A+EGI VGLR YRFF
Sbjct: 231  SN-ASYNKIAREGIFVGLRQYRFF 253


>ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 995

 Score =  229 bits (583), Expect = 3e-57
 Identities = 121/276 (43%), Positives = 173/276 (62%), Gaps = 3/276 (1%)
 Frame = +3

Query: 195  ISFMAFPSSQTPLPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTK 374
            +S +A    Q  LP   E++I++ICRE+ L  PD +AR  L+ LG+  +L +L+++SS +
Sbjct: 6    LSLLAGNGPQLRLPSAAEDLIERICREKSLLPPDPVARKALAGLGEAAALDILRKVSSRR 65

Query: 375  IHNLSALIMHIVKRDDNASNRGSARSSDSRFTQASENIQYESGSS---RSSPKKPWTQIA 545
            I NLSALIM++  R + A     A +       +  N   E   +   R     P  Q+A
Sbjct: 66   IKNLSALIMYMASRPNAAQASTHASACFPHSPSSGPNSVAEEPHACTPRFEGSLPSGQMA 125

Query: 546  SPQMLALGEFEFRKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVWKTVGSHCI 725
            SPQ++ALG  EFRK FLILSY+G+ +LE+++S++ I K++  PM +FE +VWK VGS CI
Sbjct: 126  SPQLVALGRLEFRKAFLILSYIGRNKLEEMISVDFIEKIQLWPMKQFELEVWKEVGSKCI 185

Query: 726  SEELRIKGLDWESNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENVLNVRFADD 905
            SE  R K +DW+S   H+Y C VD      FKGPYL+  RTHLQR+LGD+NVL V+F D+
Sbjct: 186  SELDRRKNMDWDSGKAHVYHCHVDLERNFTFKGPYLQLQRTHLQRILGDDNVLLVKFTDE 245

Query: 906  AIDKKNSALSLDHRYPSFYDLAKEGILVGLRLYRFF 1013
               +K S+ S       ++ +A+EGI VGLR Y+FF
Sbjct: 246  MSGEKRSSCSFQISNSVYHKVAEEGIFVGLRWYQFF 281


>ref|XP_009385773.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3 [Musa
            acuminata subsp. malaccensis]
          Length = 947

 Score =  228 bits (581), Expect = 5e-57
 Identities = 120/277 (43%), Positives = 173/277 (62%), Gaps = 4/277 (1%)
 Frame = +3

Query: 195  ISFMAFPSSQTPLPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTK 374
            +S +A    Q  LP   E++I++ICRE+ L  PD +AR  L+ LG+  +L +L+++SS +
Sbjct: 6    LSLLAGNGPQLRLPSAAEDLIERICREKSLLPPDPVARKALAGLGEAAALDILRKVSSRR 65

Query: 375  IHNLSALIMHIVKRDDNASNRGSARSSDSRFTQASENIQYESGSSRSSPK----KPWTQI 542
            I NLSALIM++  R + A     A +       +  N          +P+     P  Q+
Sbjct: 66   IKNLSALIMYMASRPNAAQASTHASACFPHSPSSGPNSVAAEEPHACTPRFEGSLPSGQM 125

Query: 543  ASPQMLALGEFEFRKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVWKTVGSHC 722
            ASPQ++ALG  EFRK FLILSY+G+ +LE+++S++ I K++  PM +FE +VWK VGS C
Sbjct: 126  ASPQLVALGRLEFRKAFLILSYIGRNKLEEMISVDFIEKIQLWPMKQFELEVWKEVGSKC 185

Query: 723  ISEELRIKGLDWESNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENVLNVRFAD 902
            ISE  R K +DW+S   H+Y C VD      FKGPYL+  RTHLQR+LGD+NVL V+F D
Sbjct: 186  ISELDRRKNMDWDSGKAHVYHCHVDLERNFTFKGPYLQLQRTHLQRILGDDNVLLVKFTD 245

Query: 903  DAIDKKNSALSLDHRYPSFYDLAKEGILVGLRLYRFF 1013
            +   +K S+ S       ++ +A+EGI VGLR Y+FF
Sbjct: 246  EMSGEKRSSCSFQISNSVYHKVAEEGIFVGLRWYQFF 282


>ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 996

 Score =  228 bits (581), Expect = 5e-57
 Identities = 120/277 (43%), Positives = 173/277 (62%), Gaps = 4/277 (1%)
 Frame = +3

Query: 195  ISFMAFPSSQTPLPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTK 374
            +S +A    Q  LP   E++I++ICRE+ L  PD +AR  L+ LG+  +L +L+++SS +
Sbjct: 6    LSLLAGNGPQLRLPSAAEDLIERICREKSLLPPDPVARKALAGLGEAAALDILRKVSSRR 65

Query: 375  IHNLSALIMHIVKRDDNASNRGSARSSDSRFTQASENIQYESGSSRSSPK----KPWTQI 542
            I NLSALIM++  R + A     A +       +  N          +P+     P  Q+
Sbjct: 66   IKNLSALIMYMASRPNAAQASTHASACFPHSPSSGPNSVAAEEPHACTPRFEGSLPSGQM 125

Query: 543  ASPQMLALGEFEFRKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVWKTVGSHC 722
            ASPQ++ALG  EFRK FLILSY+G+ +LE+++S++ I K++  PM +FE +VWK VGS C
Sbjct: 126  ASPQLVALGRLEFRKAFLILSYIGRNKLEEMISVDFIEKIQLWPMKQFELEVWKEVGSKC 185

Query: 723  ISEELRIKGLDWESNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENVLNVRFAD 902
            ISE  R K +DW+S   H+Y C VD      FKGPYL+  RTHLQR+LGD+NVL V+F D
Sbjct: 186  ISELDRRKNMDWDSGKAHVYHCHVDLERNFTFKGPYLQLQRTHLQRILGDDNVLLVKFTD 245

Query: 903  DAIDKKNSALSLDHRYPSFYDLAKEGILVGLRLYRFF 1013
            +   +K S+ S       ++ +A+EGI VGLR Y+FF
Sbjct: 246  EMSGEKRSSCSFQISNSVYHKVAEEGIFVGLRWYQFF 282


>ref|XP_010916733.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Elaeis
            guineensis]
          Length = 809

 Score =  224 bits (572), Expect = 6e-56
 Identities = 127/273 (46%), Positives = 175/273 (64%), Gaps = 12/273 (4%)
 Frame = +3

Query: 231  LPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTK-IHNLSALIMHI 407
            LP  VEE++ +ICR++ LS PD IAR +L++LG+E SL++L +IS+ + + NLS  I+++
Sbjct: 19   LPSAVEELLARICRDKSLSPPDAIARRELAALGEEASLRILHDISAARSVKNLSGFIVYM 78

Query: 408  VKRDDNASNRGSARSSDSRFTQASENIQYESGSSRSSPKK-----------PWTQIASPQ 554
             K    A     AR +++  TQ S      S  + +S +            P  Q+ASPQ
Sbjct: 79   AKNSPVAL----ARHAEALSTQESACFSGPSSPAFTSNRDDSTACPLDCEMPQRQMASPQ 134

Query: 555  MLALGEFEFRKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVWKTVGSHCISEE 734
            M ALGE EFRK FLILSY+GK  LE  +S+  I+++K  PMA FE +VW+ +G   IS+ 
Sbjct: 135  MEALGELEFRKAFLILSYIGKSSLESAISVGFIQRIKFFPMALFESEVWREIGHKYISDS 194

Query: 735  LRIKGLDWESNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENVLNVRFADDAID 914
             R K LDW+S  TH+Y C VD +G  +FKGPYL+ T+THLQRVLGD+NVL V+FA+D   
Sbjct: 195  DRRKALDWDSGKTHVYHCCVDLDGTYIFKGPYLQVTKTHLQRVLGDDNVLLVKFAEDMHG 254

Query: 915  KKNSALSLDHRYPSFYDLAKEGILVGLRLYRFF 1013
            +K SA  +      ++  AKEGILVGLR Y FF
Sbjct: 255  EKRSAHCIVSSTDVYHKFAKEGILVGLRRYYFF 287


>ref|XP_008791538.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X3
            [Phoenix dactylifera]
          Length = 957

 Score =  220 bits (561), Expect = 1e-54
 Identities = 124/279 (44%), Positives = 177/279 (63%), Gaps = 12/279 (4%)
 Frame = +3

Query: 231  LPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTK-IHNLSALIMHI 407
            LP  VEE++ +ICR++ L  PD IAR +L++LG+E SL++L +IS+ + + NLS  IM++
Sbjct: 19   LPSAVEELLARICRDKSLPPPDPIARSELAALGEEASLRILHDISAARSVRNLSGFIMYM 78

Query: 408  VKRDDNASNRGSARSSDSRFTQASENIQYESGSSRSSP-----------KKPWTQIASPQ 554
             +     S+   AR++++  TQ S      S  + +S            K P  Q ASPQ
Sbjct: 79   ARN----SHVALARNAEAHSTQESACFSGSSSPALTSNRDESTACPLDCKIPQRQTASPQ 134

Query: 555  MLALGEFEFRKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVWKTVGSHCISEE 734
            M ALGE EF K FLILSY+GK  LE+ +S+  I+++K  PM+ FE +VW+ +G   IS+ 
Sbjct: 135  MEALGELEFMKAFLILSYIGKSSLENAISVGFIQRIKFFPMSLFELEVWRELGHKYISDS 194

Query: 735  LRIKGLDWESNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENVLNVRFADDAID 914
             R K LDW+S  TH+Y C VD +G  +FKGPYL+ T+THLQRVLGD+NVL V+F ++   
Sbjct: 195  DRRKNLDWDSGKTHVYHCCVDLDGTYIFKGPYLQVTKTHLQRVLGDDNVLLVKFVEEMRR 254

Query: 915  KKNSALSLDHRYPSFYDLAKEGILVGLRLYRFFGNLTAG 1031
            +K SA  +      ++ +AKEGILVGLR Y FF +   G
Sbjct: 255  EKRSAHCIVSSSDVYHKIAKEGILVGLRRYYFFVSKDGG 293


>ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Phoenix dactylifera]
          Length = 1006

 Score =  220 bits (561), Expect = 1e-54
 Identities = 124/279 (44%), Positives = 177/279 (63%), Gaps = 12/279 (4%)
 Frame = +3

Query: 231  LPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTK-IHNLSALIMHI 407
            LP  VEE++ +ICR++ L  PD IAR +L++LG+E SL++L +IS+ + + NLS  IM++
Sbjct: 19   LPSAVEELLARICRDKSLPPPDPIARSELAALGEEASLRILHDISAARSVRNLSGFIMYM 78

Query: 408  VKRDDNASNRGSARSSDSRFTQASENIQYESGSSRSSP-----------KKPWTQIASPQ 554
             +     S+   AR++++  TQ S      S  + +S            K P  Q ASPQ
Sbjct: 79   ARN----SHVALARNAEAHSTQESACFSGSSSPALTSNRDESTACPLDCKIPQRQTASPQ 134

Query: 555  MLALGEFEFRKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVWKTVGSHCISEE 734
            M ALGE EF K FLILSY+GK  LE+ +S+  I+++K  PM+ FE +VW+ +G   IS+ 
Sbjct: 135  MEALGELEFMKAFLILSYIGKSSLENAISVGFIQRIKFFPMSLFELEVWRELGHKYISDS 194

Query: 735  LRIKGLDWESNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENVLNVRFADDAID 914
             R K LDW+S  TH+Y C VD +G  +FKGPYL+ T+THLQRVLGD+NVL V+F ++   
Sbjct: 195  DRRKNLDWDSGKTHVYHCCVDLDGTYIFKGPYLQVTKTHLQRVLGDDNVLLVKFVEEMRR 254

Query: 915  KKNSALSLDHRYPSFYDLAKEGILVGLRLYRFFGNLTAG 1031
            +K SA  +      ++ +AKEGILVGLR Y FF +   G
Sbjct: 255  EKRSAHCIVSSSDVYHKIAKEGILVGLRRYYFFVSKDGG 293


>ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Nelumbo nucifera]
          Length = 1022

 Score =  207 bits (528), Expect = 8e-51
 Identities = 118/284 (41%), Positives = 177/284 (62%), Gaps = 14/284 (4%)
 Frame = +3

Query: 204  MAFPSSQTPLPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKIHN 383
            MA PS++ PLP  VEEM++ IC +Q L   +  AR +L+ LG+E SL+LL+ IS  +I +
Sbjct: 1    MADPSAEVPLPVSVEEMLRTICEQQSLPPAEMSARRELALLGEEASLQLLRRISGQRIRS 60

Query: 384  LSALIMHIVKRD-DNASNRGSARSSDSRFTQASENIQ---YESGSSRSSPKKPWTQIAS- 548
            L+  I+++ +      S+R S   S  R +++S ++    Y+  +S S   +   +  S 
Sbjct: 61   LTGFIIYMARSVCTTVSSRKSVCFSGPRSSESSVSVSMRGYDDATSHSPRLERLNRQKSG 120

Query: 549  ---------PQMLALGEFEFRKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVW 701
                       ++ALGE EFRK FLILSY+GK RLEDV+++E I+K++ LPM +FE +VW
Sbjct: 121  LGLEGMSRESLLMALGELEFRKAFLILSYIGKNRLEDVMTVETIKKIRNLPMVKFESEVW 180

Query: 702  KTVGSHCISEELRIKGLDWESNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENV 881
              +G H +    R+K LDW+S  T+LY C VD +G   FKGPYL+  +THLQRVLGD+ V
Sbjct: 181  NDIGCHYVEHADRMKFLDWDSGKTYLYHCLVDPDGSYSFKGPYLDTKKTHLQRVLGDDKV 240

Query: 882  LNVRFADDAIDKKNSALSLDHRYPSFYDLAKEGILVGLRLYRFF 1013
            L V+F  ++ + +N + S +    ++  +AKEGIL+GL  Y FF
Sbjct: 241  LIVKFIQESTN-RNGSTSYNILNTNYGRIAKEGILLGLLRYHFF 283


>ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nelumbo nucifera]
          Length = 1045

 Score =  207 bits (528), Expect = 8e-51
 Identities = 118/284 (41%), Positives = 177/284 (62%), Gaps = 14/284 (4%)
 Frame = +3

Query: 204  MAFPSSQTPLPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKIHN 383
            MA PS++ PLP  VEEM++ IC +Q L   +  AR +L+ LG+E SL+LL+ IS  +I +
Sbjct: 1    MADPSAEVPLPVSVEEMLRTICEQQSLPPAEMSARRELALLGEEASLQLLRRISGQRIRS 60

Query: 384  LSALIMHIVKRD-DNASNRGSARSSDSRFTQASENIQ---YESGSSRSSPKKPWTQIAS- 548
            L+  I+++ +      S+R S   S  R +++S ++    Y+  +S S   +   +  S 
Sbjct: 61   LTGFIIYMARSVCTTVSSRKSVCFSGPRSSESSVSVSMRGYDDATSHSPRLERLNRQKSG 120

Query: 549  ---------PQMLALGEFEFRKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVW 701
                       ++ALGE EFRK FLILSY+GK RLEDV+++E I+K++ LPM +FE +VW
Sbjct: 121  LGLEGMSRESLLMALGELEFRKAFLILSYIGKNRLEDVMTVETIKKIRNLPMVKFESEVW 180

Query: 702  KTVGSHCISEELRIKGLDWESNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENV 881
              +G H +    R+K LDW+S  T+LY C VD +G   FKGPYL+  +THLQRVLGD+ V
Sbjct: 181  NDIGCHYVEHADRMKFLDWDSGKTYLYHCLVDPDGSYSFKGPYLDTKKTHLQRVLGDDKV 240

Query: 882  LNVRFADDAIDKKNSALSLDHRYPSFYDLAKEGILVGLRLYRFF 1013
            L V+F  ++ + +N + S +    ++  +AKEGIL+GL  Y FF
Sbjct: 241  LIVKFIQESTN-RNGSTSYNILNTNYGRIAKEGILLGLLRYHFF 283


>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 988

 Score =  191 bits (485), Expect = 7e-46
 Identities = 107/264 (40%), Positives = 162/264 (61%), Gaps = 3/264 (1%)
 Frame = +3

Query: 231  LPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKIH-NLSALIMHI 407
            LPP VE +I+ ICR+Q+    D+  R +L   G+E+SL++L +I++T+I  + +  + H+
Sbjct: 13   LPPSVEALIESICRDQNRPPLDYSTRHRLKLQGEEQSLRILNKIAATRIRLSFAGFVNHM 72

Query: 408  VKRDDNASNRGSARSSDSRFTQASENIQYE-SGSSRSSPKKPWTQIASPQMLALGEFEFR 584
            +   ++ +N  +  ++++     + + Q E S   ++SP +P     S  + ALGE EFR
Sbjct: 73   LDDINHQNNNNNNNNNNNNNNNNNSHSQPEPSTRQQTSPTRPPRPTPSSLLHALGELEFR 132

Query: 585  KLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVWKTVGSHCISEEL-RIKGLDWE 761
            K FLILSY+G++ LE+ ++   IR LK LPMA+FE+ +W+  G  CI ++  R    DW 
Sbjct: 133  KAFLILSYIGRESLENCITDAKIRSLKDLPMAKFEKTIWEDFGEKCIYDQSDRQLHRDWN 192

Query: 762  SNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENVLNVRFADDAIDKKNSALSLD 941
            S  TH+Y C V  +G + FKGP L+ TRTHLQ+ LGD+NVL V+FA+D    KN     +
Sbjct: 193  SGRTHVYQCFVFPDGNLRFKGPILQSTRTHLQKTLGDDNVLLVKFAEDG-SGKNFRTHAE 251

Query: 942  HRYPSFYDLAKEGILVGLRLYRFF 1013
                 +    KEGI VGLRLYRFF
Sbjct: 252  EANALYGKFGKEGIRVGLRLYRFF 275


>ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana sylvestris]
          Length = 1021

 Score =  189 bits (481), Expect = 2e-45
 Identities = 121/305 (39%), Positives = 161/305 (52%), Gaps = 41/305 (13%)
 Frame = +3

Query: 222  QTPLPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKIHN-LSALI 398
            + PLP  +E M++KIC EQ    PD   R +L S+G++ SL +L+ IS+  I   LSA +
Sbjct: 20   EAPLPSSIEAMLRKICSEQCQEPPDAGIRRRLGSIGEQGSLAILRIISTRAIRKTLSAFL 79

Query: 399  MHIVKRDDNASNRGSARSSDSRF------TQASENIQYESGSSRSSPK---KPWTQIASP 551
            ++++ R  +  +     S   R       T  S+ +Q ES SS+  PK    P  Q ASP
Sbjct: 80   VYLMDRYPDCLSSSPFASPQKRTSPSLLPTPESKRVQGES-SSKPKPKIGSSPCVQFASP 138

Query: 552  Q----------------------------MLALGEFEFRKLFLILSYLGKKRLEDVLSME 647
            Q                            ++ LGE EFRKLFL+LSY+G K+LEDV+S +
Sbjct: 139  QRVIRQLSFGDEPSPESNCRTPSLNISQQLMILGELEFRKLFLVLSYIGSKKLEDVISPK 198

Query: 648  M---IRKLKCLPMAEFERDVWKTVGSHCISEELRIKGLDWESNCTHLYCCDVDSNGKIMF 818
            +   I + K LPM +FE ++W   G  C +E  R K LDW+   THLY C +  NG   F
Sbjct: 199  IADDIVRKKTLPMTDFESEIWNAFGKACYTESDRSKYLDWDCGKTHLYYCHIKQNGYCTF 258

Query: 819  KGPYLEKTRTHLQRVLGDENVLNVRFADDAIDKKNSALSLDHRYPSFYDLAKEGILVGLR 998
            KGPYL  TRTHLQR LGDENVL V+F +DA                   + +EGILVG R
Sbjct: 259  KGPYLNTTRTHLQRALGDENVLIVKFVEDACCAN--------------IIVEEGILVGFR 304

Query: 999  LYRFF 1013
             YRFF
Sbjct: 305  RYRFF 309


>ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana sylvestris]
          Length = 1023

 Score =  189 bits (481), Expect = 2e-45
 Identities = 121/305 (39%), Positives = 161/305 (52%), Gaps = 41/305 (13%)
 Frame = +3

Query: 222  QTPLPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKIHN-LSALI 398
            + PLP  +E M++KIC EQ    PD   R +L S+G++ SL +L+ IS+  I   LSA +
Sbjct: 20   EAPLPSSIEAMLRKICSEQCQEPPDAGIRRRLGSIGEQGSLAILRIISTRAIRKTLSAFL 79

Query: 399  MHIVKRDDNASNRGSARSSDSRF------TQASENIQYESGSSRSSPK---KPWTQIASP 551
            ++++ R  +  +     S   R       T  S+ +Q ES SS+  PK    P  Q ASP
Sbjct: 80   VYLMDRYPDCLSSSPFASPQKRTSPSLLPTPESKRVQGES-SSKPKPKIGSSPCVQFASP 138

Query: 552  Q----------------------------MLALGEFEFRKLFLILSYLGKKRLEDVLSME 647
            Q                            ++ LGE EFRKLFL+LSY+G K+LEDV+S +
Sbjct: 139  QRVIRQLSFGDEPSPESNCRTPSLNISQQLMILGELEFRKLFLVLSYIGSKKLEDVISPK 198

Query: 648  M---IRKLKCLPMAEFERDVWKTVGSHCISEELRIKGLDWESNCTHLYCCDVDSNGKIMF 818
            +   I + K LPM +FE ++W   G  C +E  R K LDW+   THLY C +  NG   F
Sbjct: 199  IADDIVRKKTLPMTDFESEIWNAFGKACYTESDRSKYLDWDCGKTHLYYCHIKQNGYCTF 258

Query: 819  KGPYLEKTRTHLQRVLGDENVLNVRFADDAIDKKNSALSLDHRYPSFYDLAKEGILVGLR 998
            KGPYL  TRTHLQR LGDENVL V+F +DA                   + +EGILVG R
Sbjct: 259  KGPYLNTTRTHLQRALGDENVLIVKFVEDACCAN--------------IIVEEGILVGFR 304

Query: 999  LYRFF 1013
             YRFF
Sbjct: 305  RYRFF 309


>gb|KHN40391.1| Putative RNA-dependent RNA polymerase 5 [Glycine soja]
          Length = 985

 Score =  189 bits (480), Expect = 3e-45
 Identities = 108/262 (41%), Positives = 158/262 (60%), Gaps = 1/262 (0%)
 Frame = +3

Query: 231  LPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKIHNLSALIMHIV 410
            LPP VE +I+ ICR+Q+    D+  R +L   G+E+SL++L +I++T+I    A  ++ +
Sbjct: 13   LPPSVEALIESICRDQNRPPLDYSTRHRLKLQGEEQSLRILNKIAATRIRLSFAGFVNHM 72

Query: 411  KRDDNASNRGSARSSDSRFTQASENIQYESGSSRSSPKKPWTQIASPQMLALGEFEFRKL 590
              D N  N  +  +++++    S+     S   ++SP +P     S  + ALGE EFRK 
Sbjct: 73   LDDINHQNNNNNNNNNNKNNSHSQ--PEPSTRQQTSPTRPPRPTPSSLLHALGELEFRKA 130

Query: 591  FLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVWKTVGSHCISEEL-RIKGLDWESN 767
            FLILSY+G++ LE+ ++   IR LK LPMA+FE+ +W+  G  CI ++  R    DW S 
Sbjct: 131  FLILSYIGRESLENCITDAKIRSLKDLPMAKFEKTIWEDFGEKCIYDQSDRQLHRDWNSG 190

Query: 768  CTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENVLNVRFADDAIDKKNSALSLDHR 947
             TH+Y C V  +G + FKGP L+ TRTHLQ+ LGD+NVL V+FA+D    KN     +  
Sbjct: 191  RTHVYQCFVFPDGNLRFKGPILQSTRTHLQKTLGDDNVLLVKFAEDG-SGKNFRTHAEEA 249

Query: 948  YPSFYDLAKEGILVGLRLYRFF 1013
               +    KEGI VGLRLYRFF
Sbjct: 250  NALYGKFGKEGIRVGLRLYRFF 271


>gb|KDO66531.1| hypothetical protein CISIN_1g001771mg [Citrus sinensis]
          Length = 1015

 Score =  187 bits (476), Expect = 8e-45
 Identities = 115/289 (39%), Positives = 163/289 (56%), Gaps = 28/289 (9%)
 Frame = +3

Query: 231  LPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKI-HNLSALIMHI 407
            LP  VE++I KI  EQ+   PD  AR  L+SLG++ +L +L+ I+S KI ++ S  I ++
Sbjct: 15   LPLSVEQLISKIYTEQNKLPPDDGARRSLASLGEDAALDVLRTIASDKIKYSFSGYINYL 74

Query: 408  VKRDDN---------------ASNRGSARSSDSRFTQASENIQY-----------ESGSS 509
            VK+ +N                 NR     +  R     +   Y             GS 
Sbjct: 75   VKKRNNNGSPLKRVCFSPSSPQQNRSPVTVTTVRLLNLPQGTDYVVKQSPVADQQPRGSP 134

Query: 510  RSSPKKPWTQIAS-PQMLALGEFEFRKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEF 686
             SS        AS PQ +ALGE EFRK FLILSY+G+  LE+V++ + IR ++ L MA F
Sbjct: 135  MSSISHAMRHRASIPQYVALGELEFRKAFLILSYIGENSLEEVITADEIRGMRDLQMARF 194

Query: 687  ERDVWKTVGSHCISEELRIKGLDWESNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVL 866
            E +VW+ +G   IS+E R   L W+S  TH+Y C + + G   FKGPYL +TRTHLQR L
Sbjct: 195  ESEVWEKLGRKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQREL 254

Query: 867  GDENVLNVRFADDAIDKKNSALSLDHRYPSFYDLAKEGILVGLRLYRFF 1013
            GD+N+L V+F D+ +    S+ + +  Y  + ++A+EGILVGLR Y FF
Sbjct: 255  GDDNILLVKF-DEELGGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFF 302


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843311|ref|XP_006475557.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
            sinensis] gi|557554498|gb|ESR64512.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score =  187 bits (476), Expect = 8e-45
 Identities = 115/287 (40%), Positives = 164/287 (57%), Gaps = 26/287 (9%)
 Frame = +3

Query: 231  LPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKI-HNLSALIMHI 407
            LP  VE++I KI  EQ+   PD  AR  L+SLG++ +L +L+ I+S KI ++ S  I ++
Sbjct: 15   LPLSVEQLISKIYTEQNKLPPDDGARRSLASLGEDAALDVLRTIASDKIKYSFSGYINYL 74

Query: 408  VKRDDN---------------ASNRGSARSSDSRFTQASENI---------QYESGSSRS 515
            VK+ +N                 NR     +  R     ++          Q   GS  S
Sbjct: 75   VKKRNNNGSPLKRVCFSPSSPQQNRSPVTVTTVRLLNLPQDYVVKQSPVADQQPRGSPMS 134

Query: 516  SPKKPWTQIAS-PQMLALGEFEFRKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFER 692
            S        AS PQ +ALGE EFRK FLILSY+G+  LE+V++ + IR ++ L MA FE 
Sbjct: 135  SISHAMRHRASIPQYVALGELEFRKAFLILSYIGENSLEEVITADEIRGMRDLQMARFES 194

Query: 693  DVWKTVGSHCISEELRIKGLDWESNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGD 872
            +VW+ +G   IS+E R   L W+S  TH+Y C + + G   FKGPYL +TRTHLQR LGD
Sbjct: 195  EVWEKLGRKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGD 254

Query: 873  ENVLNVRFADDAIDKKNSALSLDHRYPSFYDLAKEGILVGLRLYRFF 1013
            +N+L V+F D+ +    S+ + +  Y  + ++A+EGILVGLR Y FF
Sbjct: 255  DNILLVKF-DEELGGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFF 300


>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843309|ref|XP_006475556.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
            sinensis] gi|557554497|gb|ESR64511.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1015

 Score =  187 bits (476), Expect = 8e-45
 Identities = 115/289 (39%), Positives = 163/289 (56%), Gaps = 28/289 (9%)
 Frame = +3

Query: 231  LPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKI-HNLSALIMHI 407
            LP  VE++I KI  EQ+   PD  AR  L+SLG++ +L +L+ I+S KI ++ S  I ++
Sbjct: 15   LPLSVEQLISKIYTEQNKLPPDDGARRSLASLGEDAALDVLRTIASDKIKYSFSGYINYL 74

Query: 408  VKRDDN---------------ASNRGSARSSDSRFTQASENIQY-----------ESGSS 509
            VK+ +N                 NR     +  R     +   Y             GS 
Sbjct: 75   VKKRNNNGSPLKRVCFSPSSPQQNRSPVTVTTVRLLNLPQGTDYVVKQSPVADQQPRGSP 134

Query: 510  RSSPKKPWTQIAS-PQMLALGEFEFRKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEF 686
             SS        AS PQ +ALGE EFRK FLILSY+G+  LE+V++ + IR ++ L MA F
Sbjct: 135  MSSISHAMRHRASIPQYVALGELEFRKAFLILSYIGENSLEEVITADEIRGMRDLQMARF 194

Query: 687  ERDVWKTVGSHCISEELRIKGLDWESNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVL 866
            E +VW+ +G   IS+E R   L W+S  TH+Y C + + G   FKGPYL +TRTHLQR L
Sbjct: 195  ESEVWEKLGRKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQREL 254

Query: 867  GDENVLNVRFADDAIDKKNSALSLDHRYPSFYDLAKEGILVGLRLYRFF 1013
            GD+N+L V+F D+ +    S+ + +  Y  + ++A+EGILVGLR Y FF
Sbjct: 255  GDDNILLVKF-DEELGGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFF 302


>ref|XP_012076892.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Jatropha curcas]
          Length = 1003

 Score =  187 bits (475), Expect = 1e-44
 Identities = 112/279 (40%), Positives = 165/279 (59%), Gaps = 18/279 (6%)
 Frame = +3

Query: 231  LPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKIHN-LSALIMHI 407
            LPP VE++I +IC +Q      + AR +L+S+G++ +L++L+ ISST+I       + ++
Sbjct: 9    LPPSVEQLIAEICTKQQQPRLGNQARRELASIGEDEALEILRTISSTEIKKTFDGFVFYL 68

Query: 408  VKRDDNASNRGSARSSDSRFTQASENIQYESGS---------------SRSSPKKPWTQI 542
            VK+   A+N GS      R   + ++ Q  S S               SR S       +
Sbjct: 69   VKKW--ATNNGSP---GKRLCLSPQSPQQSSRSPTTTRLMMPARLHLESRFSSASSSAAV 123

Query: 543  ASPQMLALGEFEFRKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVWKTVGSHC 722
             SPQ+ ALGE EFRK FLILSY+G  +LE+V+S E IR +K LPM +FE +VW ++G  C
Sbjct: 124  ISPQLEALGELEFRKAFLILSYMGGYKLENVISAEKIRGIKDLPMDKFEIEVWNSIGFKC 183

Query: 723  --ISEELRIKGLDWESNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENVLNVRF 896
              + +  R +   W+   TH+Y C V ++G   FKGP+L      LQR LGD+NVL V+F
Sbjct: 184  GYVKDNERPRYFVWDCGITHIYHCHVYADGTYRFKGPHLTTLSNFLQRALGDDNVLMVKF 243

Query: 897  ADDAIDKKNSALSLDHRYPSFYDLAKEGILVGLRLYRFF 1013
            A++  ++++SA S  H Y ++  LA EG+LVGLR YRFF
Sbjct: 244  AEEETEERSSASSSVHYYANYKKLAIEGVLVGLRRYRFF 282


>ref|XP_012076891.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Jatropha curcas]
          Length = 1008

 Score =  187 bits (475), Expect = 1e-44
 Identities = 112/279 (40%), Positives = 165/279 (59%), Gaps = 18/279 (6%)
 Frame = +3

Query: 231  LPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKIHN-LSALIMHI 407
            LPP VE++I +IC +Q      + AR +L+S+G++ +L++L+ ISST+I       + ++
Sbjct: 9    LPPSVEQLIAEICTKQQQPRLGNQARRELASIGEDEALEILRTISSTEIKKTFDGFVFYL 68

Query: 408  VKRDDNASNRGSARSSDSRFTQASENIQYESGS---------------SRSSPKKPWTQI 542
            VK+   A+N GS      R   + ++ Q  S S               SR S       +
Sbjct: 69   VKKW--ATNNGSP---GKRLCLSPQSPQQSSRSPTTTRLMMPARLHLESRFSSASSSAAV 123

Query: 543  ASPQMLALGEFEFRKLFLILSYLGKKRLEDVLSMEMIRKLKCLPMAEFERDVWKTVGSHC 722
             SPQ+ ALGE EFRK FLILSY+G  +LE+V+S E IR +K LPM +FE +VW ++G  C
Sbjct: 124  ISPQLEALGELEFRKAFLILSYMGGYKLENVISAEKIRGIKDLPMDKFEIEVWNSIGFKC 183

Query: 723  --ISEELRIKGLDWESNCTHLYCCDVDSNGKIMFKGPYLEKTRTHLQRVLGDENVLNVRF 896
              + +  R +   W+   TH+Y C V ++G   FKGP+L      LQR LGD+NVL V+F
Sbjct: 184  GYVKDNERPRYFVWDCGITHIYHCHVYADGTYRFKGPHLTTLSNFLQRALGDDNVLMVKF 243

Query: 897  ADDAIDKKNSALSLDHRYPSFYDLAKEGILVGLRLYRFF 1013
            A++  ++++SA S  H Y ++  LA EG+LVGLR YRFF
Sbjct: 244  AEEETEERSSASSSVHYYANYKKLAIEGVLVGLRRYRFF 282


>ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1018

 Score =  186 bits (472), Expect = 2e-44
 Identities = 121/305 (39%), Positives = 159/305 (52%), Gaps = 41/305 (13%)
 Frame = +3

Query: 222  QTPLPPLVEEMIQKICREQHLSSPDHIARGKLSSLGQERSLKLLKEISSTKIHN-LSALI 398
            + PLP  VE M++KIC EQ    PD   R +L S+G++ SL +L+ ISS  I   LSA +
Sbjct: 17   EAPLPSSVEAMLRKICSEQCQEPPDVGIRRRLGSIGEQGSLTILRIISSRPIRKTLSAFL 76

Query: 399  MHIVKRDDNASNRGSARSSDSRF------TQASENIQYESGSSRSSPK---KPWTQIASP 551
            ++++ R  +  +     S   R       T  S+ +Q ES S++  PK    P  Q ASP
Sbjct: 77   VYLMDRYPDCLSSSPFASPQKRTSPSLLPTPESKRVQGES-STKPKPKIGSSPCVQFASP 135

Query: 552  ----------------------------QMLALGEFEFRKLFLILSYLGKKRLEDVLSME 647
                                        Q++ L E EFRKLFL+LSY+G K LEDV+S +
Sbjct: 136  HRVVRQLSFRDEPSPESNCRTPPPNISQQLMILSELEFRKLFLVLSYIGSKTLEDVISPK 195

Query: 648  M---IRKLKCLPMAEFERDVWKTVGSHCISEELRIKGLDWESNCTHLYCCDVDSNGKIMF 818
            +   I + K LPM +FE ++W   G  C +E  R K LDW+   THLY C +  NG   F
Sbjct: 196  IADDIVRKKTLPMTDFESEIWNAFGKACYAESDRSKYLDWDCGKTHLYYCHIKQNGYCTF 255

Query: 819  KGPYLEKTRTHLQRVLGDENVLNVRFADDAIDKKNSALSLDHRYPSFYDLAKEGILVGLR 998
            KGPYL  TRTHLQR LGDENVL V+F +DA                   + +EGILVG R
Sbjct: 256  KGPYLNTTRTHLQRALGDENVLIVKFVEDACCAN--------------IIVEEGILVGFR 301

Query: 999  LYRFF 1013
             YRFF
Sbjct: 302  RYRFF 306