BLASTX nr result

ID: Cinnamomum23_contig00051106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00051106
         (267 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266986.1| PREDICTED: pentatricopeptide repeat-containi...    69   1e-09
ref|XP_010935172.1| PREDICTED: pentatricopeptide repeat-containi...    60   7e-07

>ref|XP_010266986.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Nelumbo nucifera]
          Length = 463

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
 Frame = -2

Query: 224 TKPPSK--SSNQHSKPQNTVDPLLLYCQLLSQGRFPSTIISISALKACARLSAFQEGQTI 51
           TKPP +  + +    P +++D L+LY Q L+ GR P+  I ISA+KAC  L AFQ+G  I
Sbjct: 13  TKPPQRVPTDSPSKAPPSSIDALILYHQTLTLGRSPNKTILISAIKACTLLPAFQQGIAI 72

Query: 50  HAQITKAGSRSNQFIA 3
           HAQI K G  +++F+A
Sbjct: 73  HAQIIKTGFHADRFLA 88


>ref|XP_010935172.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Elaeis guineensis]
          Length = 470

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = -2

Query: 239 PLSSITKPP-SKSSNQHSKPQNT-VDPLLLYCQLLSQGRFPSTIISISALKACARLSAFQ 66
           PL    KPP S   NQ S  Q + VD LL Y + ++QG  P+    ISA++AC+ L +  
Sbjct: 12  PLPPSPKPPTSPRRNQRSNSQTSGVDALLRYLRSVTQGSVPNKTTFISAMRACSLLPSIP 71

Query: 65  EGQTIHAQITKAGSRSNQFIA 3
           EG+ IH+ I KAG  +++FIA
Sbjct: 72  EGRAIHSHILKAGLGADRFIA 92