BLASTX nr result
ID: Cinnamomum23_contig00049632
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00049632
(374 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 173 5e-41
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera] 170 4e-40
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 170 4e-40
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 164 2e-38
ref|XP_010107341.1| hypothetical protein L484_008147 [Morus nota... 164 3e-38
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera] 158 1e-36
emb|CAN83735.1| hypothetical protein VITISV_000740 [Vitis vinifera] 157 3e-36
ref|XP_010111323.1| hypothetical protein L484_027980 [Morus nota... 150 2e-34
ref|XP_009601439.1| PREDICTED: galactoside 2-alpha-L-fucosyltran... 147 2e-33
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 144 3e-32
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 144 3e-32
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 143 4e-32
dbj|BAA22288.1| polyprotein [Oryza australiensis] 142 1e-31
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 140 4e-31
emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group] gi... 138 2e-30
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 134 2e-29
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 134 3e-29
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 134 3e-29
gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japoni... 130 3e-28
gb|ABF96975.1| retrotransposon protein, putative, Ty1-copia subc... 130 3e-28
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 173 bits (438), Expect = 5e-41
Identities = 85/127 (66%), Positives = 101/127 (79%), Gaps = 4/127 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GGAISWRSIKQ C AD T EAEYVAA KEAVWL+ FLL+LGVVP + +T+YCDNS
Sbjct: 1152 GGAISWRSIKQTCVADFTMEAEYVAASEAAKEAVWLRNFLLDLGVVPSVQSPITLYCDNS 1211
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQ 27
GAVA SKEPRSHK KH+ RK HL+R+IVQR D+ + KIA +NLADPFTK L++ FE+
Sbjct: 1212 GAVANSKEPRSHKRAKHIXRKYHLIRDIVQRGDVVVMKIASENNLADPFTKSLSSTTFER 1271
Query: 26 HVDGMGL 6
HV+GMG+
Sbjct: 1272 HVEGMGV 1278
>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
Length = 1544
Score = 170 bits (430), Expect = 4e-40
Identities = 83/126 (65%), Positives = 100/126 (79%), Gaps = 4/126 (3%)
Frame = -1
Query: 371 GAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNSG 204
GAISWRSIKQ C ADST EA+YVAA KE VWL+ FLL+LGVVP + +T+YCDNSG
Sbjct: 1412 GAISWRSIKQTCVADSTMEAKYVAASEAAKEVVWLRNFLLDLGVVPSVQSPITLYCDNSG 1471
Query: 203 AVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQH 24
AVA SKEPRSHK KH+ RK HL+R+IVQR D+ + KIA +NLADPFTK L++ FE+H
Sbjct: 1472 AVANSKEPRSHKRAKHIERKYHLIRDIVQRGDVVVMKIASENNLADPFTKSLSSTTFERH 1531
Query: 23 VDGMGL 6
V+GMG+
Sbjct: 1532 VEGMGV 1537
>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 170 bits (430), Expect = 4e-40
Identities = 85/127 (66%), Positives = 100/127 (78%), Gaps = 4/127 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GGAISWRSIKQ ADST EAEYVAA KEAVWL+ FLL+LGVVP + +T+YCDNS
Sbjct: 500 GGAISWRSIKQTXVADSTMEAEYVAASEAAKEAVWLRNFLLDLGVVPSVQSPITLYCDNS 559
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQ 27
GAVA SKEPRSHK KH+ RK HL+R+IVQR D + KIA +NLADPFTK L++ FE+
Sbjct: 560 GAVANSKEPRSHKRAKHIERKYHLIRDIVQRGDXVVMKIASENNLADPFTKSLSSXTFER 619
Query: 26 HVDGMGL 6
HV+GMG+
Sbjct: 620 HVEGMGV 626
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 164 bits (415), Expect = 2e-38
Identities = 81/127 (63%), Positives = 98/127 (77%), Gaps = 4/127 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GGAI WRS+KQ C ADST EAEYVAA KEAVWL+ FL EL VVP + + +YCDNS
Sbjct: 535 GGAIIWRSVKQTCVADSTMEAEYVAACEAAKEAVWLREFLKELEVVPNMHEPIRLYCDNS 594
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQ 27
GAVA +KEPR+H+ KH+ RK HLVREIV R D+++ KIA A+N+ADPFTK L + FEQ
Sbjct: 595 GAVANAKEPRNHRKGKHIERKFHLVREIVSRGDVSVEKIASANNIADPFTKTLPARSFEQ 654
Query: 26 HVDGMGL 6
H++GMGL
Sbjct: 655 HLEGMGL 661
>ref|XP_010107341.1| hypothetical protein L484_008147 [Morus notabilis]
gi|587927786|gb|EXC14993.1| hypothetical protein
L484_008147 [Morus notabilis]
Length = 175
Score = 164 bits (414), Expect = 3e-38
Identities = 82/124 (66%), Positives = 97/124 (78%), Gaps = 4/124 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GG++ WRSIKQ C ADST EAEYVAA KEAVWLK+FL+ L VVP A + + +YCDNS
Sbjct: 42 GGSVVWRSIKQTCIADSTMEAEYVAACETAKEAVWLKKFLVSLEVVPDADRPMVLYCDNS 101
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQ 27
GAVA SKEPRSHK KH+ RK HL+REIVQR D+ +TKI+ DNLADPFTK L+ KVF
Sbjct: 102 GAVANSKEPRSHKRSKHIERKYHLIREIVQRGDVEVTKISIHDNLADPFTKALSGKVFVS 161
Query: 26 HVDG 15
H++G
Sbjct: 162 HLEG 165
>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
Length = 961
Score = 158 bits (400), Expect = 1e-36
Identities = 81/144 (56%), Positives = 98/144 (68%), Gaps = 21/144 (14%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA---------------------KEAVWLKRFLLEL 258
GGAI WRS+KQ C ADST EAEYVAA KEAVWL+ FL EL
Sbjct: 811 GGAIIWRSVKQTCVADSTMEAEYVAACEAAKEAVWLREFLKELEVAAKEAVWLREFLKEL 870
Query: 257 GVVPLARQLVTVYCDNSGAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFAD 78
VVP +L+ +YCDNSGAVA +KEP++H+ KH+ RK HLVREIV R D+ + IA A+
Sbjct: 871 EVVPNMHELIRLYCDNSGAVANAKEPKNHRKGKHIERKFHLVREIVSRGDVLVENIASAN 930
Query: 77 NLADPFTKPLTTKVFEQHVDGMGL 6
N+ADPFTK L T+ FEQH++GMGL
Sbjct: 931 NIADPFTKTLPTRSFEQHLEGMGL 954
>emb|CAN83735.1| hypothetical protein VITISV_000740 [Vitis vinifera]
Length = 230
Score = 157 bits (396), Expect = 3e-36
Identities = 75/127 (59%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GGAI WRS+KQ C DST EAEYVAA KEAVWL+ FL EL VVP + + +YCDNS
Sbjct: 97 GGAIIWRSVKQTCVVDSTMEAEYVAACEAAKEAVWLREFLKELEVVPNMHEPIRLYCDNS 156
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQ 27
GAVA +KEPR+H+ KH+ RK HLVR++V R D+++ I +A+N+ADPFTK L + EQ
Sbjct: 157 GAVANAKEPRNHRKGKHIERKFHLVRKVVSRGDVSVENITYANNIADPFTKTLPARSLEQ 216
Query: 26 HVDGMGL 6
H++GMGL
Sbjct: 217 HLEGMGL 223
>ref|XP_010111323.1| hypothetical protein L484_027980 [Morus notabilis]
gi|587944319|gb|EXC30801.1| hypothetical protein
L484_027980 [Morus notabilis]
Length = 225
Score = 150 bits (380), Expect = 2e-34
Identities = 76/126 (60%), Positives = 93/126 (73%), Gaps = 4/126 (3%)
Frame = -1
Query: 371 GAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNSG 204
GAI WRSIKQ C ADST EAEYVAA KEAVWL+ FL EL VVP + + +YCDNSG
Sbjct: 93 GAIIWRSIKQSCIADSTVEAEYVAACEAAKEAVWLREFLKELEVVPNMHEPIILYCDNSG 152
Query: 203 AVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQH 24
AVA +KEPR+H+ KH+ RK HLVREIV R D+++ K+A A+N+ADPF K L FE+H
Sbjct: 153 AVANAKEPRNHRKGKHIERKFHLVREIVSRGDVSVEKVASANNIADPFIKTLPAGSFERH 212
Query: 23 VDGMGL 6
++ M L
Sbjct: 213 LENMRL 218
>ref|XP_009601439.1| PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Nicotiana
tomentosiformis]
Length = 671
Score = 147 bits (372), Expect = 2e-33
Identities = 74/125 (59%), Positives = 88/125 (70%), Gaps = 4/125 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GGAISWRSIKQ C DST EAEYVAA KE VWL+ L EL VVP + +YCDNS
Sbjct: 38 GGAISWRSIKQSCIVDSTMEAEYVAASEAAKEVVWLENILKELNVVPSVQAPNVIYCDNS 97
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQ 27
G VA SKEP SHK KH+ R HL+R+I Q+ D + KIA +NLADPFTK L K+F++
Sbjct: 98 GVVANSKEPWSHKRSKHIERTYHLIRDITQKGDAKVLKIASENNLADPFTKSLPQKIFDK 157
Query: 26 HVDGM 12
HV+G+
Sbjct: 158 HVEGI 162
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 144 bits (362), Expect = 3e-32
Identities = 68/127 (53%), Positives = 91/127 (71%), Gaps = 4/127 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GGA+SW+S KQE ADST+EAEY+AA KE VW++ F+ ELG+VP A + +YCDN+
Sbjct: 766 GGAVSWKSSKQETVADSTTEAEYIAASEAAKEGVWIRNFITELGMVPSASSPMDLYCDNN 825
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQ 27
GA+AQ+KEPRSH+ KH+ R+ HL+RE+V R D+ I K+ N+ADP TKPLT E
Sbjct: 826 GAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKVHTDLNIADPLTKPLTQPKHEA 885
Query: 26 HVDGMGL 6
H +G+
Sbjct: 886 HTRAIGI 892
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 144 bits (362), Expect = 3e-32
Identities = 68/123 (55%), Positives = 89/123 (72%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAAKEAVWLKRFLLELGVVPLARQLVTVYCDNSGAVA 195
GGA+SW+S KQ+ DST+EAEY+AA EAVW+K+F+ +LGV+ A + +YCDNSGA+A
Sbjct: 1057 GGAVSWKSSKQDIVVDSTTEAEYIAASEAVWIKKFVSQLGVMTSASSSMDLYCDNSGAIA 1116
Query: 194 QSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQHVDG 15
Q+KEPRSH+ KH+ R+ HL+REIV R D+ I KI N+ADP TKPL E H
Sbjct: 1117 QAKEPRSHQKSKHILRQYHLIREIVGRGDVKICKIHTDLNVADPLTKPLPQPKHEAHTRA 1176
Query: 14 MGL 6
MG+
Sbjct: 1177 MGI 1179
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 143 bits (361), Expect = 4e-32
Identities = 69/127 (54%), Positives = 91/127 (71%), Gaps = 4/127 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GGA+SW+S KQE ADST++AEY+AA KE VW++ F+ ELGVVP A + +YCDN+
Sbjct: 1182 GGAVSWKSSKQETVADSTTKAEYIAASEAAKEGVWIRNFIAELGVVPSASSPMDLYCDNN 1241
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQ 27
GA+AQ+KEPRSH+ KH+ R+ HL+RE+V R D+ I KI N+ADP TKPLT E
Sbjct: 1242 GAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKIHTDLNVADPLTKPLTQPKHEA 1301
Query: 26 HVDGMGL 6
H +G+
Sbjct: 1302 HTRAIGI 1308
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 142 bits (357), Expect = 1e-31
Identities = 69/127 (54%), Positives = 91/127 (71%), Gaps = 4/127 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GGA+SW+S KQ+ ADST+EAEY+AA KEAVW+K+F+ ELGV+ +++YCDNS
Sbjct: 1186 GGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSELGVMTSTTGPMSLYCDNS 1245
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQ 27
GA+AQ+KEPRSH+ KH+ R+ HL+REIV R D+ I K+ N+ADP TKPL E
Sbjct: 1246 GAIAQAKEPRSHQKSKHILRRYHLIREIVDRGDVKICKVHTDLNIADPLTKPLPQPKHEA 1305
Query: 26 HVDGMGL 6
H MG+
Sbjct: 1306 HTRAMGI 1312
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 140 bits (352), Expect = 4e-31
Identities = 64/127 (50%), Positives = 91/127 (71%), Gaps = 4/127 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GGA+SW+S KQ ADST+EAEY+AA KE VW+++F+ ELGVVP + +YCDN+
Sbjct: 833 GGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGVVPSISGPIDLYCDNN 892
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQ 27
GA+AQ+KEP+SH+ KH+ R+ HL+REI+ R D+ I++++ N+AD FTKPL E
Sbjct: 893 GAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVADHFTKPLPQPKHES 952
Query: 26 HVDGMGL 6
H +G+
Sbjct: 953 HTTAIGI 959
>emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group]
gi|38347202|emb|CAD40526.2| OSJNBa0023J03.14 [Oryza
sativa Japonica Group] gi|116308930|emb|CAH66059.1|
OSIGBa0125J07.8 [Oryza sativa Indica Group]
gi|116309043|emb|CAH66155.1| OSIGBa0113B06.1 [Oryza
sativa Indica Group]
Length = 704
Score = 138 bits (347), Expect = 2e-30
Identities = 68/127 (53%), Positives = 89/127 (70%), Gaps = 4/127 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GGA+SW+S KQ ADST+EAEY+AA KE VW+K+F+ +LGV+ + + +YCDNS
Sbjct: 573 GGAVSWKSSKQNTVADSTTEAEYIAASEAAKEVVWIKKFVSQLGVMTSTSRPMDLYCDNS 632
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQ 27
GA+AQ+KEPRSH+ KH+ R+ HL+REIV R D+ I KI N+ADP TKPL E
Sbjct: 633 GAIAQAKEPRSHQKSKHILRRYHLIREIVGRGDVKICKIHTDLNVADPLTKPLPQPKHEA 692
Query: 26 HVDGMGL 6
H MG+
Sbjct: 693 HTRAMGI 699
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 134 bits (338), Expect = 2e-29
Identities = 66/121 (54%), Positives = 86/121 (71%), Gaps = 4/121 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GGA+SW+S KQ+ ADST+EAEY+AA KEA W+K+F+ +LGV+ A + +YCDNS
Sbjct: 810 GGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAAWIKKFVSQLGVMTSASSPMDLYCDNS 869
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQ 27
GA+AQ+KEPRSH+ KH+ R+ HL+REIV R D+ I KI N+ DP TKPL E
Sbjct: 870 GAIAQAKEPRSHRKSKHILRRYHLIREIVGRGDVKICKIHTDLNVVDPLTKPLPRPKHET 929
Query: 26 H 24
H
Sbjct: 930 H 930
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 134 bits (336), Expect = 3e-29
Identities = 65/113 (57%), Positives = 86/113 (76%), Gaps = 4/113 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GGA+SW+S KQ+ ADST+EAEY+AA KEAVW+K+F+ +LGV+ A + +YCDNS
Sbjct: 1135 GGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASSPMDLYCDNS 1194
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPL 48
GA+AQ+KEPRSH+ KH+ R+ HL+RE+V R D+ I KI N+ADP TKPL
Sbjct: 1195 GAIAQAKEPRSHQKSKHILRRYHLIREMVGRGDVKICKIHTDLNVADPLTKPL 1247
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 134 bits (336), Expect = 3e-29
Identities = 65/113 (57%), Positives = 86/113 (76%), Gaps = 4/113 (3%)
Frame = -1
Query: 374 GGAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNS 207
GGA+SW+S KQ+ ADST+EAEY+AA KEAVW+K+F+ +LGV+ A + +YCDNS
Sbjct: 1048 GGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASSPMDLYCDNS 1107
Query: 206 GAVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPL 48
GA+AQ+KEPRSH+ KH+ R+ HL+RE+V R D+ I KI N+ADP TKPL
Sbjct: 1108 GAIAQAKEPRSHQKSKHILRRYHLIREMVGRGDVKICKIHTDLNVADPLTKPL 1160
>gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|41393192|gb|AAS01915.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 547
Score = 130 bits (327), Expect = 3e-28
Identities = 65/126 (51%), Positives = 88/126 (69%), Gaps = 4/126 (3%)
Frame = -1
Query: 371 GAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNSG 204
GA+SW++ KQ+ ADST+EAEY+AA KEAVW+K+F+ +LGV+ A + +YCDNSG
Sbjct: 417 GAVSWKNSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASSPMDLYCDNSG 476
Query: 203 AVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQH 24
A+AQ+KEPRSH+ K++ R HL+REIV R D+ I KI N+ADP KP+ E H
Sbjct: 477 AIAQAKEPRSHQKSKYILRWYHLIREIVGRGDVKICKIHSDLNVADPLIKPVPQPKHEAH 536
Query: 23 VDGMGL 6
MG+
Sbjct: 537 TRAMGI 542
>gb|ABF96975.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 562
Score = 130 bits (327), Expect = 3e-28
Identities = 65/126 (51%), Positives = 88/126 (69%), Gaps = 4/126 (3%)
Frame = -1
Query: 371 GAISWRSIKQECTADSTSEAEYVAA----KEAVWLKRFLLELGVVPLARQLVTVYCDNSG 204
GA+SW++ KQ+ ADST+EAEY+AA KEAVW+K+F+ +LGV+ A + +YCDNSG
Sbjct: 432 GAVSWKNSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASSPMDLYCDNSG 491
Query: 203 AVAQSKEPRSHKSQKHV*RKCHLVREIVQRCDIAITKIAFADNLADPFTKPLTTKVFEQH 24
A+AQ+KEPRSH+ K++ R HL+REIV R D+ I KI N+ADP KP+ E H
Sbjct: 492 AIAQAKEPRSHQKSKYILRWYHLIREIVGRGDVKICKIHSDLNVADPLIKPVPQPKHEAH 551
Query: 23 VDGMGL 6
MG+
Sbjct: 552 TRAMGI 557