BLASTX nr result
ID: Cinnamomum23_contig00048435
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00048435
(560 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHB87051.1| putative RNA replicase, partial [Escobaria virus] 65 3e-08
gb|AHB33487.1| replicase [Garlic virus A] 58 2e-06
gb|AGC09135.1| Replicase, partial [Garlic virus A] 58 2e-06
gb|AGG13276.1| Replicase [Garlic virus A] 58 2e-06
ref|NP_659010.1| hypothetical protein GvEgp1 [Garlic virus E] gi... 57 7e-06
ref|NP_569126.1| replicase [Garlic virus A] gi|2826150|dbj|BAA61... 57 7e-06
ref|YP_008855206.1| replicase [Garlic virus D] gi|558868945|gb|A... 57 7e-06
gb|AHA90833.1| replicase [Garlic virus D] 57 7e-06
dbj|BAA74944.1| RNA dependent RNA polymerase, partial [Garlic vi... 57 7e-06
gb|AEV51805.1| replicase, partial [Garlic virus B] 57 7e-06
gb|AEV51800.1| replicase, partial [Garlic virus A] 57 7e-06
ref|NP_932306.1| 158kDa replicase [Botrytis virus X] gi|75551978... 57 7e-06
>gb|AHB87051.1| putative RNA replicase, partial [Escobaria virus]
Length = 851
Score = 64.7 bits (156), Expect = 3e-08
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Frame = -1
Query: 554 SGDDIERKAGLAVSPKWNQWEQHDHSIEKRE-VGDRGEFCSFGISQGLVYKDPILLYKRL 378
+GDDI R P W ++ QH ++ + V R +FC + ++ + K PI LY+ L
Sbjct: 678 AGDDIVRDQACPERPSW-RYTQHAFQLQAKPLVTSRPDFCGWRLTPYGIVKSPIQLYQSL 736
Query: 377 RGRLSMGDVEDIALGYFDLFTKNYALGDRIYQVMTEEEIEYASAVNRVM 231
+ L +G +ED+ Y + Y LGDR+Y+V E+E+ V R+M
Sbjct: 737 QLALQLGKMEDVKRSYAIDYAYAYQLGDRLYEVFDEKEMAAHQLVTRIM 785
>gb|AHB33487.1| replicase [Garlic virus A]
Length = 1612
Score = 58.2 bits (139), Expect = 2e-06
Identities = 34/108 (31%), Positives = 53/108 (49%)
Frame = -1
Query: 554 SGDDIERKAGLAVSPKWNQWEQHDHSIEKREVGDRGEFCSFGISQGLVYKDPILLYKRLR 375
+GDD+ R W EQ K V ++ +FC + ++ + K PI LY+ L+
Sbjct: 1409 AGDDLVRDRACEERAGWVYSEQLFSLKAKPLVTNKPDFCGWRLTPYGIVKSPIQLYQSLQ 1468
Query: 374 GRLSMGDVEDIALGYFDLFTKNYALGDRIYQVMTEEEIEYASAVNRVM 231
L +G VED+ Y + Y LGD++Y + EEE+E V R +
Sbjct: 1469 LALRLGKVEDVKRSYAIDYLFAYRLGDKLYDIFDEEELEKHQLVTRTL 1516
>gb|AGC09135.1| Replicase, partial [Garlic virus A]
Length = 891
Score = 58.2 bits (139), Expect = 2e-06
Identities = 34/108 (31%), Positives = 53/108 (49%)
Frame = -1
Query: 554 SGDDIERKAGLAVSPKWNQWEQHDHSIEKREVGDRGEFCSFGISQGLVYKDPILLYKRLR 375
+GDD+ R W EQ K V ++ +FC + ++ + K PI LY+ L+
Sbjct: 688 AGDDLVRDRACEERAGWVYSEQLFSLKAKPLVTNKPDFCGWRLTPYGIVKSPIQLYQSLQ 747
Query: 374 GRLSMGDVEDIALGYFDLFTKNYALGDRIYQVMTEEEIEYASAVNRVM 231
L +G VED+ Y + Y LGD++Y + EEE+E V R +
Sbjct: 748 LALRLGKVEDVKRSYAIDYLFAYRLGDKLYDIFDEEELEKHQLVTRTL 795
>gb|AGG13276.1| Replicase [Garlic virus A]
Length = 1600
Score = 58.2 bits (139), Expect = 2e-06
Identities = 33/108 (30%), Positives = 53/108 (49%)
Frame = -1
Query: 554 SGDDIERKAGLAVSPKWNQWEQHDHSIEKREVGDRGEFCSFGISQGLVYKDPILLYKRLR 375
+GDD+ R W E+ K V ++ +FC + ++ + K PI LY+ L+
Sbjct: 1392 AGDDLVRDKACEERAGWTYSEKLFSLKAKPLVTNKPDFCGWRLTPHGIVKSPIQLYQSLQ 1451
Query: 374 GRLSMGDVEDIALGYFDLFTKNYALGDRIYQVMTEEEIEYASAVNRVM 231
L +G VED+ Y + Y LGD++Y + EEE+E V R +
Sbjct: 1452 LALRLGKVEDVKRSYAIDYLFAYRLGDKLYDIFDEEELEKHQLVTRTL 1499
>ref|NP_659010.1| hypothetical protein GvEgp1 [Garlic virus E]
gi|18621091|emb|CAC83705.1| hypothetical protein [Garlic
virus E]
Length = 1557
Score = 56.6 bits (135), Expect = 7e-06
Identities = 32/108 (29%), Positives = 53/108 (49%)
Frame = -1
Query: 554 SGDDIERKAGLAVSPKWNQWEQHDHSIEKREVGDRGEFCSFGISQGLVYKDPILLYKRLR 375
+GDD+ R P W E K V ++ +FC + +++ + K P+ LY+ L+
Sbjct: 1351 AGDDLVRDKACEERPGWKYAEPLFSLKAKPLVTNKPDFCGWRLTKFGIVKSPVQLYQSLQ 1410
Query: 374 GRLSMGDVEDIALGYFDLFTKNYALGDRIYQVMTEEEIEYASAVNRVM 231
L +G VE++ Y + Y LGD++Y V E E+E V R +
Sbjct: 1411 LALRLGKVEEVKRSYAIDYLFAYRLGDQLYDVFDENEMEKHQLVTRTL 1458
>ref|NP_569126.1| replicase [Garlic virus A] gi|2826150|dbj|BAA61806.1| replicase
[Garlic virus A]
Length = 1625
Score = 56.6 bits (135), Expect = 7e-06
Identities = 33/108 (30%), Positives = 52/108 (48%)
Frame = -1
Query: 554 SGDDIERKAGLAVSPKWNQWEQHDHSIEKREVGDRGEFCSFGISQGLVYKDPILLYKRLR 375
+GDD+ R W E+ K V + +FC + ++ + K PI LY+ L+
Sbjct: 1422 AGDDLVRDRACEERAGWVYSERLFSLKAKPLVTSKPDFCGWRLTPHGIVKSPIQLYQSLQ 1481
Query: 374 GRLSMGDVEDIALGYFDLFTKNYALGDRIYQVMTEEEIEYASAVNRVM 231
L +G VED+ Y + Y LGD++Y + EEE+E V R +
Sbjct: 1482 LALRLGKVEDVKRSYAIDYLFAYRLGDKLYDIFDEEELEKHQLVTRTL 1529
>ref|YP_008855206.1| replicase [Garlic virus D] gi|558868945|gb|AHA93785.1| replicase
[Garlic virus D]
Length = 1562
Score = 56.6 bits (135), Expect = 7e-06
Identities = 32/108 (29%), Positives = 53/108 (49%)
Frame = -1
Query: 554 SGDDIERKAGLAVSPKWNQWEQHDHSIEKREVGDRGEFCSFGISQGLVYKDPILLYKRLR 375
+GDD+ R P W E K V ++ +FC + +++ + K P+ LY+ L+
Sbjct: 1356 AGDDLVRDKACEERPGWKYAEPLFSLKAKPLVTNKPDFCGWRLTKYGIVKSPVQLYQSLQ 1415
Query: 374 GRLSMGDVEDIALGYFDLFTKNYALGDRIYQVMTEEEIEYASAVNRVM 231
L +G VE++ Y + Y LGD++Y V E E+E V R +
Sbjct: 1416 LALRLGKVEEVKRSYAIDYLFAYRLGDQLYDVFDENEMEKHQLVTRTL 1463
>gb|AHA90833.1| replicase [Garlic virus D]
Length = 1561
Score = 56.6 bits (135), Expect = 7e-06
Identities = 32/108 (29%), Positives = 53/108 (49%)
Frame = -1
Query: 554 SGDDIERKAGLAVSPKWNQWEQHDHSIEKREVGDRGEFCSFGISQGLVYKDPILLYKRLR 375
+GDD+ R P W E K V ++ +FC + +++ + K P+ LY+ L+
Sbjct: 1355 AGDDLVRDKACEERPGWKYAEPLFSLKAKPLVTNKPDFCGWRLTKYGIVKSPVQLYQSLQ 1414
Query: 374 GRLSMGDVEDIALGYFDLFTKNYALGDRIYQVMTEEEIEYASAVNRVM 231
L +G VE++ Y + Y LGD++Y V E E+E V R +
Sbjct: 1415 LALRLGKVEEVKRSYAIDYLFAYRLGDQLYDVFDENEMEKHQLVTRTL 1462
>dbj|BAA74944.1| RNA dependent RNA polymerase, partial [Garlic virus D]
Length = 285
Score = 56.6 bits (135), Expect = 7e-06
Identities = 32/108 (29%), Positives = 53/108 (49%)
Frame = -1
Query: 554 SGDDIERKAGLAVSPKWNQWEQHDHSIEKREVGDRGEFCSFGISQGLVYKDPILLYKRLR 375
+GDD+ R P W E K V ++ +FC + +++ + K P+ LY+ L+
Sbjct: 79 AGDDLVRDKACEERPGWKYAEPLFSLKAKPLVTNKPDFCGWRLTKYGIVKSPVQLYQSLQ 138
Query: 374 GRLSMGDVEDIALGYFDLFTKNYALGDRIYQVMTEEEIEYASAVNRVM 231
L +G VE++ Y + Y LGD++Y V E E+E V R +
Sbjct: 139 LALRLGKVEEVKRSYAIDYLFAYRLGDQLYDVFDENEMEKHQLVTRTL 186
>gb|AEV51805.1| replicase, partial [Garlic virus B]
Length = 428
Score = 56.6 bits (135), Expect = 7e-06
Identities = 31/108 (28%), Positives = 54/108 (50%)
Frame = -1
Query: 554 SGDDIERKAGLAVSPKWNQWEQHDHSIEKREVGDRGEFCSFGISQGLVYKDPILLYKRLR 375
+GDD+ R P W E K V ++ +FC + +++ + K P+ LY+ L+
Sbjct: 223 AGDDLVRDKACDERPGWKYSEPLFSLKAKPLVTNKPDFCGWRLTKYGIVKSPVQLYQSLQ 282
Query: 374 GRLSMGDVEDIALGYFDLFTKNYALGDRIYQVMTEEEIEYASAVNRVM 231
LS+G VE++ Y + Y LGD++Y + E+E+ V R +
Sbjct: 283 LALSLGKVEEVKRSYAIDYLFAYRLGDQLYDIFDEDELAKHQLVTRTL 330
>gb|AEV51800.1| replicase, partial [Garlic virus A]
Length = 224
Score = 56.6 bits (135), Expect = 7e-06
Identities = 33/108 (30%), Positives = 53/108 (49%)
Frame = -1
Query: 554 SGDDIERKAGLAVSPKWNQWEQHDHSIEKREVGDRGEFCSFGISQGLVYKDPILLYKRLR 375
+GDD+ R W E+ K V ++ +FC + ++ + K PI LY+ L+
Sbjct: 21 AGDDLVRDRACEERAGWVYSERLFSLKAKPLVTNKPDFCGWRLTPYGIVKSPIQLYQSLQ 80
Query: 374 GRLSMGDVEDIALGYFDLFTKNYALGDRIYQVMTEEEIEYASAVNRVM 231
L +G VED+ Y + Y LGD++Y + EEE+E V R +
Sbjct: 81 LALRLGKVEDVKRSYAIDYLFAYRLGDKLYDIFDEEELEKHQLVTRTL 128
>ref|NP_932306.1| 158kDa replicase [Botrytis virus X]
gi|75551978|sp|Q6YNQ7.1|RDRP_BOTVX RecName: Full=RNA
replication protein; Includes: RecName: Full=RNA-directed
RNA polymerase; Includes: RecName: Full=Helicase
gi|37359172|gb|AAL17722.1| 158kDa replicase [Botrytis
virus X]
Length = 1413
Score = 56.6 bits (135), Expect = 7e-06
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = -1
Query: 554 SGDDIERKAGLAVSPKWNQWEQHDHSIEKREVGDRG-EFCSFGISQGLVYKDPILLYKRL 378
+GDD+ R W ++ H +++ + + R +FC + +++ + K+P L++ +
Sbjct: 1233 AGDDLARDRNCPERASW-KYISHQFTLQAKPLVTRKPDFCGWSLTKHGIVKNPKQLWQSM 1291
Query: 377 RGRLSMGDVEDIALGYFDLFTKNYALGDRIYQVMTEEEIEYASAVNRVM 231
+ L + ++DI Y F YALGD++Y + TEEE+ Y A R+M
Sbjct: 1292 QLGLKLDKLKDIVPSYSLDFHHAYALGDKVYDIFTEEEMAYHQATVRLM 1340