BLASTX nr result

ID: Cinnamomum23_contig00048199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00048199
         (313 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264260.1| PREDICTED: protein CHROMATIN REMODELING 24 [...    60   7e-07
ref|XP_010025768.1| PREDICTED: DNA excision repair protein ERCC-...    59   1e-06
ref|XP_010270309.1| PREDICTED: protein CHROMATIN REMODELING 24 i...    56   8e-06
ref|XP_010270308.1| PREDICTED: protein CHROMATIN REMODELING 24 i...    56   8e-06

>ref|XP_002264260.1| PREDICTED: protein CHROMATIN REMODELING 24 [Vitis vinifera]
            gi|296088517|emb|CBI37508.3| unnamed protein product
            [Vitis vinifera]
          Length = 1043

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 27/47 (57%), Positives = 39/47 (82%)
 Frame = -2

Query: 312  SQLPDKGERMQRQIYELNLQLQKIYDSHRKDAEIIDLDDISGQLEKL 172
            S+LPDKGER+Q+QI ELNL+L K+  + R + E+IDLDD++G+LE +
Sbjct: 994  SKLPDKGERIQKQIAELNLELDKMRMTKRIETEVIDLDDVTGKLENV 1040


>ref|XP_010025768.1| PREDICTED: DNA excision repair protein ERCC-6-like [Eucalyptus
            grandis] gi|629096513|gb|KCW62508.1| hypothetical protein
            EUGRSUZ_H05148 [Eucalyptus grandis]
          Length = 1091

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/46 (58%), Positives = 36/46 (78%)
 Frame = -2

Query: 312  SQLPDKGERMQRQIYELNLQLQKIYDSHRKDAEIIDLDDISGQLEK 175
            S+LPDKG R++RQ+ ELNL L+KI  + R + E+IDLDDISG  +K
Sbjct: 1042 SRLPDKGTRIERQLAELNLDLEKIRKAERTEKEVIDLDDISGDFQK 1087


>ref|XP_010270309.1| PREDICTED: protein CHROMATIN REMODELING 24 isoform X2 [Nelumbo
            nucifera]
          Length = 1008

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/50 (56%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = -2

Query: 312  SQLPDKGERMQRQIYELNLQLQKI-YDSHRKDAEIIDLDDISGQLEKLRT 166
            S+LPDKG++++RQ+ ELNL+L KI  +  R + EIIDLDDISG L ++ T
Sbjct: 958  SRLPDKGDKIRRQVAELNLELDKIRMEDKRIEKEIIDLDDISGDLHRVLT 1007


>ref|XP_010270308.1| PREDICTED: protein CHROMATIN REMODELING 24 isoform X1 [Nelumbo
            nucifera]
          Length = 1030

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/50 (56%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = -2

Query: 312  SQLPDKGERMQRQIYELNLQLQKI-YDSHRKDAEIIDLDDISGQLEKLRT 166
            S+LPDKG++++RQ+ ELNL+L KI  +  R + EIIDLDDISG L ++ T
Sbjct: 980  SRLPDKGDKIRRQVAELNLELDKIRMEDKRIEKEIIDLDDISGDLHRVLT 1029


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