BLASTX nr result

ID: Cinnamomum23_contig00047353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00047353
         (253 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012458349.1| PREDICTED: uncharacterized protein LOC105779...    60   4e-07
ref|XP_009785398.1| PREDICTED: uncharacterized protein LOC104233...    60   7e-07
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]    59   2e-06

>ref|XP_012458349.1| PREDICTED: uncharacterized protein LOC105779155 [Gossypium
           raimondii]
          Length = 832

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
 Frame = +3

Query: 6   LYNLRPYNGNDRLYMDDNWPLILTYTGTHEIQTPSRNINLKTVLLLPSLGRSLIVASQFT 185
           L ++ PY+G   L M D  P++++  GT  + T S+++ +  VL +PS+ ++L+  SQF 
Sbjct: 494 LRDVTPYSGKSSLLMGDGTPVVISSIGTTILPTQSKSLRMSNVLCVPSIQKNLLSVSQFA 553

Query: 186 KENNCSIKF----CVIKD*ASQTTL 248
           ++N    +F    CVIKD  +Q TL
Sbjct: 554 RDNGVFFEFHPTHCVIKDAVTQETL 578


>ref|XP_009785398.1| PREDICTED: uncharacterized protein LOC104233667 [Nicotiana
           sylvestris]
          Length = 238

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 27/69 (39%), Positives = 44/69 (63%)
 Frame = +3

Query: 6   LYNLRPYNGNDRLYMDDNWPLILTYTGTHEIQTPSRNINLKTVLLLPSLGRSLIVASQFT 185
           L +++PYNGND + + +   L ++YTG     T S   +LK +L++P+L  +L+   +FT
Sbjct: 86  LSSIQPYNGNDSVMVGNGNQLPISYTGNGNFSTHSFTFSLKNILVVPTLSCNLLSVRKFT 145

Query: 186 KENNCSIKF 212
            +NNCSI F
Sbjct: 146 SDNNCSIDF 154


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
 Frame = +3

Query: 6   LYNLR---PYNGNDRLYMDDNWPLILTYTGTHEIQTPSRNINLKTVLLLPSLGRSLIVAS 176
           L+NL    P++G D + + D + L +++TG+  + TPS +  L  VL +P++ R+LI  S
Sbjct: 170 LHNLALHSPFDGTDEIMIGDGFGLPISHTGSTSLTTPSHSFTLSNVLCVPTMKRNLISIS 229

Query: 177 QFTKENNCSIKF 212
           QF K NN SI+F
Sbjct: 230 QFCKSNNTSIEF 241


Top