BLASTX nr result

ID: Cinnamomum23_contig00047318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00047318
         (328 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]     44   1e-06
ref|XP_010662546.1| PREDICTED: uncharacterized protein LOC104882...    43   5e-06
ref|XP_011014816.1| PREDICTED: uncharacterized protein LOC105118...    43   9e-06

>gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]
          Length = 732

 Score = 43.5 bits (101), Expect(2) = 1e-06
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = +2

Query: 230 ARLVAAGCRQEYNIDYEETFAPVAKM 307
           ARLVA G  Q+Y +DYEETFAPVAKM
Sbjct: 447 ARLVAKGFSQQYGMDYEETFAPVAKM 472



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +3

Query: 123 LPKG-RACCSQSGLKIKTKDDCSINSYKARLVAEG 224
           LP G RA  S+   KIKTK D S+  YKARLVA+G
Sbjct: 419 LPPGKRAIGSRWVYKIKTKSDGSVERYKARLVAKG 453


>ref|XP_010662546.1| PREDICTED: uncharacterized protein LOC104882159 [Vitis vinifera]
          Length = 1125

 Score = 43.1 bits (100), Expect(2) = 5e-06
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = +2

Query: 230 ARLVAAGCRQEYNIDYEETFAPVAKM 307
           ARLVA G  QEY IDYEETFAPVA++
Sbjct: 915 ARLVAKGFTQEYGIDYEETFAPVARI 940



 Score = 33.5 bits (75), Expect(2) = 5e-06
 Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +3

Query: 123 LPKGRACCSQSGL-KIKTKDDCSINSYKARLVAEG 224
           LP G++  S   + KIKT+ D S+  YKARLVA+G
Sbjct: 887 LPPGQSVVSCKWIYKIKTRSDGSVERYKARLVAKG 921


>ref|XP_011014816.1| PREDICTED: uncharacterized protein LOC105118536 [Populus
           euphratica]
          Length = 1202

 Score = 43.1 bits (100), Expect(2) = 9e-06
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = +2

Query: 230 ARLVAAGCRQEYNIDYEETFAPVAKM 307
           ARLVA G  Q+Y +DYEETFAP+AKM
Sbjct: 469 ARLVAKGYSQQYGMDYEETFAPIAKM 494



 Score = 32.7 bits (73), Expect(2) = 9e-06
 Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +3

Query: 123 LPKGRACCSQSGL-KIKTKDDCSINSYKARLVAEG 224
           LP G++  S   + KIKT  D SI  YKARLVA+G
Sbjct: 441 LPPGKSVVSCRWVYKIKTNSDGSIERYKARLVAKG 475


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