BLASTX nr result
ID: Cinnamomum23_contig00047051
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00047051
(345 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012078092.1| PREDICTED: uncharacterized protein LOC105638... 81 2e-17
emb|CAN79393.1| hypothetical protein VITISV_010428 [Vitis vinifera] 74 5e-16
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 70 7e-16
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera] 75 2e-15
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 77 3e-15
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 79 3e-15
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 71 3e-15
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 79 3e-15
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 70 4e-15
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 71 6e-15
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 71 6e-15
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 70 6e-15
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 72 7e-15
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 72 7e-15
ref|XP_008376990.1| PREDICTED: uncharacterized protein LOC103440... 75 9e-15
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group] 69 1e-14
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera] 71 1e-14
gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Ho... 70 1e-14
gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subc... 70 1e-14
gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryz... 70 1e-14
>ref|XP_012078092.1| PREDICTED: uncharacterized protein LOC105638831 [Jatropha curcas]
Length = 326
Score = 80.9 bits (198), Expect(2) = 2e-17
Identities = 40/87 (45%), Positives = 60/87 (68%)
Frame = +2
Query: 2 SQYDGELLCDGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YL 181
S++DGELL DG +YR+++GSLQY T+TRPD+S+A+NK+ F+H + AAK +L YL
Sbjct: 200 SKHDGELLIDGEQYRQLIGSLQYITLTRPDVSFAINKLAQFMHQPTQVHWTAAKRLLRYL 259
Query: 182 S*EGQSIMVFGLPPSDLNLHAFSDADW 262
S+ +F S ++L FS++DW
Sbjct: 260 H-GTASMGLFFSNISQISLQCFSNSDW 285
Score = 34.7 bits (78), Expect(2) = 2e-17
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 270 CIDDQHSISGSTIFLSPNLISWSA 341
C DD+ S SG +I+LS NLISWS+
Sbjct: 288 CPDDRKSTSGYSIYLSTNLISWSS 311
>emb|CAN79393.1| hypothetical protein VITISV_010428 [Vitis vinifera]
Length = 864
Score = 74.3 bits (181), Expect(2) = 5e-16
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 SQYDGELLCDGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YL 181
S +DG +L +G +YR VG+LQY TMTRPD+ +AVNK+C F+H + A K IL YL
Sbjct: 596 SFHDGVVLENGSDYRSFVGALQYCTMTRPDIDFAVNKVCQFMHHPSDIHWQAIKHILWYL 655
Query: 182 S*EGQSIMVFGLPPS-DLNLHAFSDADW 262
+G S L PS D N+ +++ DW
Sbjct: 656 --KGTSHFGLFLQPSYDFNITCYTNVDW 681
Score = 36.2 bits (82), Expect(2) = 5e-16
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 267 SCIDDQHSISGSTIFLSPNLISWSA 341
SC DD+HS SG +FL NL+SW++
Sbjct: 683 SCPDDRHSTSGYCLFLGSNLVSWAS 707
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 69.7 bits (169), Expect(2) = 7e-16
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Frame = +2
Query: 29 DGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YLS*EGQSIMV 208
D YR +VG+LQY T+TRPDLS++VNK+C ++H+ + AAK IL YL + +
Sbjct: 1208 DSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYL----KHTVK 1263
Query: 209 FGLPPSDLN---LHAFSDADW 262
GL S N + AFSDADW
Sbjct: 1264 LGLKISKSNSLLVSAFSDADW 1284
Score = 40.4 bits (93), Expect(2) = 7e-16
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 270 CIDDQHSISGSTIFLSPNLISWSA 341
C+DD+HS G +F+ PNL+SWSA
Sbjct: 1287 CLDDRHSTGGFAVFIGPNLVSWSA 1310
>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
Length = 431
Score = 74.7 bits (182), Expect(2) = 2e-15
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +2
Query: 11 DGELLCDGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YLS*E 190
DG L D YR +VG+LQY T+TRPD++Y VNK+C F+H+ +T K +L YL
Sbjct: 92 DGTRLEDPTLYRSLVGALQYCTITRPDIAYTVNKLCQFMHAPTSTHLQVVKRVLRYL--- 148
Query: 191 GQSIMVFGL---PPSDLNLHAFSDADW 262
+ + +GL P S L+L A++DADW
Sbjct: 149 -KGSLFYGLSFQPSSSLDLIAYTDADW 174
Score = 34.3 bits (77), Expect(2) = 2e-15
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 267 SCIDDQHSISGSTIFLSPNLISWSA 341
SC DD+ S SG IF NL+SWSA
Sbjct: 176 SCPDDRRSTSGYCIFFGGNLVSWSA 200
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 77.0 bits (188), Expect(2) = 3e-15
Identities = 38/88 (43%), Positives = 56/88 (63%)
Frame = +2
Query: 2 SQYDGELLCDGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YL 181
S++DG+ + D YR +VG+LQY T+TRPD+++AVNK C F+ + + K IL YL
Sbjct: 1163 SKFDGDPMTDVTHYRSVVGALQYVTLTRPDIAFAVNKACQFMQQPTTAHWLSVKRILRYL 1222
Query: 182 S*EGQSIMVFGLPPSDLNLHAFSDADWG 265
Q ++F P S+L + F+DADWG
Sbjct: 1223 RGTMQDGLLFS-PSSNLTIEGFTDADWG 1249
Score = 31.2 bits (69), Expect(2) = 3e-15
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 264 GSCIDDQHSISGSTIFLSPNLISWSA 341
G+ +DD+ S SG ++L NL+SWS+
Sbjct: 1249 GAHLDDRRSSSGYLVYLGGNLVSWSS 1274
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 79.0 bits (193), Expect(2) = 3e-15
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 SQYDGELLCDGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YL 181
SQ+DG+L+ D YR +VG+LQY T+TRPD++++VNK C F+H +T + + K IL YL
Sbjct: 1106 SQFDGDLMDDVTMYRSVVGALQYATLTRPDIAFSVNKACQFMHRPTSTHWSSVKRILRYL 1165
Query: 182 S*EGQSIMVFGLPPS-DLNLHAFSDADWG 265
+G + L PS + A++DADWG
Sbjct: 1166 --KGTTTHGLXLQPSAHFTVQAYTDADWG 1192
Score = 29.3 bits (64), Expect(2) = 3e-15
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 264 GSCIDDQHSISGSTIFLSPNLISWSA 341
G+ DD+ S SG ++L NL+SW+A
Sbjct: 1192 GAQPDDRRSSSGYLVYLGNNLVSWTA 1217
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 71.2 bits (173), Expect(2) = 3e-15
Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +2
Query: 11 DGELLC--DGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YLS 184
DG+ L D YR IVG+LQY T+TR DLS+ VNK+C F+HS + A K IL Y+
Sbjct: 704 DGDFLGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVCQFLHSPTTVHWSAVKRILRYIK 763
Query: 185 *EGQSIMVFGLPPSDLNLHAFSDADW 262
+ + FG S L + AFSDADW
Sbjct: 764 GTVEFGLRFGKSDSML-ISAFSDADW 788
Score = 37.0 bits (84), Expect(2) = 3e-15
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 270 CIDDQHSISGSTIFLSPNLISWSA 341
C DD+ S G +FL PNLISWSA
Sbjct: 791 CSDDRRSTGGFAVFLGPNLISWSA 814
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 78.6 bits (192), Expect(2) = 3e-15
Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Frame = +2
Query: 2 SQYDGELLCDGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YL 181
SQ+DG+L+ D YR +VG+LQY T+TRPD+++++NK C F+H +T + + K IL YL
Sbjct: 1143 SQFDGDLMDDVTMYRSVVGALQYATLTRPDIAFSINKACQFMHRPTSTHWSSVKRILRYL 1202
Query: 182 S*EGQSIMVFGL---PPSDLNLHAFSDADWG 265
+ + GL P + + A++DADWG
Sbjct: 1203 ----KGTITHGLLLQPSAHFTIQAYTDADWG 1229
Score = 29.3 bits (64), Expect(2) = 3e-15
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 264 GSCIDDQHSISGSTIFLSPNLISWSA 341
G+ DD+ S SG ++L NL+SW+A
Sbjct: 1229 GAQPDDRRSSSGYLVYLGNNLVSWTA 1254
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433472|gb|AAP54977.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1031
Score = 70.1 bits (170), Expect(2) = 4e-15
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Frame = +2
Query: 29 DGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YLS*EGQSIMV 208
D YR +VG+LQY T+TRPDLS++VNK+C ++H+ + AAK IL YL + +
Sbjct: 808 DSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAATTKHWVAAKRILRYL----KHTVK 863
Query: 209 FGLPPSDLN---LHAFSDADW 262
GL S N + AFSDADW
Sbjct: 864 LGLKISKSNSLLVSAFSDADW 884
Score = 37.4 bits (85), Expect(2) = 4e-15
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 270 CIDDQHSISGSTIFLSPNLISWSA 341
C+DD+ S G +F+ PNL+SWSA
Sbjct: 887 CLDDRRSTGGFAVFIGPNLVSWSA 910
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 70.9 bits (172), Expect(2) = 6e-15
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 SQYDGELLCDGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YL 181
S DGE D YR VG+LQY T+TRPD+S+AVNK C F+ + T + A K IL YL
Sbjct: 1129 SHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYL 1188
Query: 182 S*EGQSIMVFGL---PPSDLNLHAFSDADW 262
+ + +G+ + L++H ++DADW
Sbjct: 1189 ----KGTLSYGIQMQQSTSLDIHGYTDADW 1214
Score = 36.2 bits (82), Expect(2) = 6e-15
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 267 SCIDDQHSISGSTIFLSPNLISWSA 341
SC DD+ S G IFL PNL+SWS+
Sbjct: 1216 SCPDDRRSTGGYGIFLGPNLVSWSS 1240
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 70.9 bits (172), Expect(2) = 6e-15
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 SQYDGELLCDGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YL 181
S DGE D YR VG+LQY T+TRPD+S+AVNK C F+ + T + A K IL YL
Sbjct: 987 SHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYL 1046
Query: 182 S*EGQSIMVFGL---PPSDLNLHAFSDADW 262
+ + +G+ + L++H ++DADW
Sbjct: 1047 ----KGTLSYGIQMQQSTSLDIHGYTDADW 1072
Score = 36.2 bits (82), Expect(2) = 6e-15
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 267 SCIDDQHSISGSTIFLSPNLISWSA 341
SC DD+ S G IFL PNL+SWS+
Sbjct: 1074 SCPDDRRSTGGYGIFLGPNLVSWSS 1098
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 69.7 bits (169), Expect(2) = 6e-15
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Frame = +2
Query: 29 DGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YLS*EGQSIMV 208
D YR +VG+LQY T+TRPDLS++VNK+C ++H+ + AAK IL YL + +
Sbjct: 1070 DSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYL----KHTVK 1125
Query: 209 FGLPPSDLN---LHAFSDADW 262
GL S N + AFSDADW
Sbjct: 1126 LGLKISKSNSLLVSAFSDADW 1146
Score = 37.4 bits (85), Expect(2) = 6e-15
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 270 CIDDQHSISGSTIFLSPNLISWSA 341
C+DD+ S G +F+ PNL+SWSA
Sbjct: 1149 CLDDRRSTGGFAVFIGPNLVSWSA 1172
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 71.6 bits (174), Expect(2) = 7e-15
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 SQYDGELLCDGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YL 181
SQ DG L D EYRR VG+LQY T+TRPD+++AVNK C F+ + A K IL YL
Sbjct: 1134 SQSDGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYL 1193
Query: 182 S*EGQSIMVFGL---PPSDLNLHAFSDADW 262
+ + GL P + + L +SDADW
Sbjct: 1194 ----KGTIHLGLHFQPAASMELQGYSDADW 1219
Score = 35.0 bits (79), Expect(2) = 7e-15
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 267 SCIDDQHSISGSTIFLSPNLISWSA 341
SC DD+ S SG +FL NLISWS+
Sbjct: 1221 SCPDDRRSTSGYCVFLGSNLISWSS 1245
>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
Length = 1334
Score = 71.6 bits (174), Expect(2) = 7e-15
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 SQYDGELLCDGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YL 181
SQ DG L D EYRR VG+LQY T+TRPD+++AVNK C F+ + A K IL YL
Sbjct: 1134 SQSDGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYL 1193
Query: 182 S*EGQSIMVFGL---PPSDLNLHAFSDADW 262
+ + GL P + + L +SDADW
Sbjct: 1194 ----KGTIHLGLHFQPAASMELQGYSDADW 1219
Score = 35.0 bits (79), Expect(2) = 7e-15
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 267 SCIDDQHSISGSTIFLSPNLISWSA 341
SC DD+ S SG +FL NLISWS+
Sbjct: 1221 SCPDDRRSTSGYCVFLGSNLISWSS 1245
>ref|XP_008376990.1| PREDICTED: uncharacterized protein LOC103440084 [Malus domestica]
Length = 1106
Score = 74.7 bits (182), Expect(2) = 9e-15
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +2
Query: 8 YDGELLCDGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YLS* 187
+ G LL D EYR IVG+LQY T TRPDLS+AVN++C F+H+ AAK IL +L
Sbjct: 861 HXGSLLPDPHEYRSIVGALQYLTWTRPDLSFAVNQVCQFMHAPREPHLQAAKRILRFL-- 918
Query: 188 EGQSIMVFGL--PPSDLNLHAFSDADW 262
++ + GL D++L A+SDADW
Sbjct: 919 --KAXVSHGLWFKKGDIHLTAYSDADW 943
Score = 31.6 bits (70), Expect(2) = 9e-15
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +3
Query: 270 CIDDQHSISGSTIFLSPNLISWSA 341
C D+ S SG IFL NLISWSA
Sbjct: 946 CPFDRRSTSGYCIFLGSNLISWSA 969
>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
Length = 1825
Score = 68.9 bits (167), Expect(2) = 1e-14
Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +2
Query: 29 DGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YLS*EGQSIMV 208
D YR IVG+LQY T+TRPD+S++VNK+C ++HS + A K IL YL Q
Sbjct: 1110 DATNYRSIVGALQYLTLTRPDISFSVNKVCQYLHSPTTVHWAAVKRILRYL----QQTSG 1165
Query: 209 FGL---PPSDLNLHAFSDADW 262
GL S L + FSDADW
Sbjct: 1166 LGLKIRKSSSLLVSGFSDADW 1186
Score = 37.0 bits (84), Expect(2) = 1e-14
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 270 CIDDQHSISGSTIFLSPNLISWSA 341
C+DD+ S G ++L PNL+SWSA
Sbjct: 1189 CLDDRRSTGGFAVYLGPNLVSWSA 1212
>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
Length = 1272
Score = 70.9 bits (172), Expect(2) = 1e-14
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 SQYDGELLCDGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL*YL 181
SQ DG L D EYRR VG+LQY T+TRPD+++AVNK C F+ + A K IL YL
Sbjct: 1003 SQSDGVSLSDPLEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYL 1062
Query: 182 S*EGQSIMVFGL---PPSDLNLHAFSDADW 262
+ + GL P + + L +SDADW
Sbjct: 1063 ----KGTIHLGLHFQPAASMELQGYSDADW 1088
Score = 35.0 bits (79), Expect(2) = 1e-14
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 267 SCIDDQHSISGSTIFLSPNLISWSA 341
SC DD+ S SG +FL NLISWS+
Sbjct: 1090 SCPDDRRSTSGYCVFLGSNLISWSS 1114
>gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
Length = 1150
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 SQYDGELLC--DGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL* 175
S +G LL D YR IVG+LQY T+TRPD+++++NK+C F+HS T + A K I+
Sbjct: 831 SVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIR 890
Query: 176 YLS*EGQSIMVFGLPPS-DLNLHAFSDADW 262
YL G M + S + ++AFSDADW
Sbjct: 891 YL--RGTVGMGLKIQKSQSMLVNAFSDADW 918
Score = 35.8 bits (81), Expect(2) = 1e-14
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 270 CIDDQHSISGSTIFLSPNLISWS 338
C+DD+ S SG +FL NLISWS
Sbjct: 921 CVDDRRSTSGFAVFLGSNLISWS 943
>gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 SQYDGELLC--DGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL* 175
S +G LL D YR IVG+LQY T+TRPD+++++NK+C F+HS T + A K I+
Sbjct: 793 SVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIR 852
Query: 176 YLS*EGQSIMVFGLPPS-DLNLHAFSDADW 262
YL G M + S + ++AFSDADW
Sbjct: 853 YL--RGTVGMGLKIQKSQSMLVNAFSDADW 880
Score = 35.8 bits (81), Expect(2) = 1e-14
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 270 CIDDQHSISGSTIFLSPNLISWS 338
C+DD+ S SG +FL NLISWS
Sbjct: 883 CVDDRRSTSGFAVFLGSNLISWS 905
>gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryza sativa Japonica Group]
Length = 1139
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 SQYDGELLC--DGPEYRRIVGSLQYWTMTRPDLSYAVNKICSFIHSLCATRFDAAKDIL* 175
S +G LL D YR IVG+LQY T+TRPD+++++NK+C F+HS T + A K I+
Sbjct: 799 SVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIR 858
Query: 176 YLS*EGQSIMVFGLPPS-DLNLHAFSDADW 262
YL G M + S + ++AFSDADW
Sbjct: 859 YL--RGTVGMGLKIQKSQSMLVNAFSDADW 886
Score = 35.8 bits (81), Expect(2) = 1e-14
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 270 CIDDQHSISGSTIFLSPNLISWS 338
C+DD+ S SG +FL NLISWS
Sbjct: 889 CVDDRRSTSGFAVFLGSNLISWS 911