BLASTX nr result
ID: Cinnamomum23_contig00047003
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00047003
(461 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KHN30191.1| Putative cellulose synthase A catalytic subunit 6... 83 6e-14
ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isof... 83 6e-14
ref|XP_002531375.1| RNA and export factor binding protein, putat... 82 1e-13
ref|XP_007150304.1| hypothetical protein PHAVU_005G142200g [Phas... 80 7e-13
gb|KHN32110.1| RNA and export factor-binding protein 2 [Glycine ... 76 8e-12
ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isofor... 76 8e-12
gb|KHN21975.1| RNA and export factor-binding protein 2 [Glycine ... 74 3e-11
ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isofor... 74 3e-11
gb|KHG01793.1| THO complex subunit 4 [Gossypium arboreum] 74 4e-11
ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Goss... 72 1e-10
gb|KHG13055.1| THO complex subunit 4 [Gossypium arboreum] 72 1e-10
ref|XP_007016490.1| RNA-binding family protein [Theobroma cacao]... 70 6e-10
ref|XP_010092777.1| RNA and export factor-binding protein 2 [Mor... 69 2e-09
gb|KDO72924.1| hypothetical protein CISIN_1g029981mg [Citrus sin... 68 2e-09
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor... 68 2e-09
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr... 68 2e-09
ref|XP_012472781.1| PREDICTED: THO complex subunit 4A-like [Goss... 68 3e-09
ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vin... 68 3e-09
ref|XP_012471387.1| PREDICTED: THO complex subunit 4A [Gossypium... 67 4e-09
gb|KHG17012.1| THO complex subunit 4 [Gossypium arboreum] gi|728... 67 4e-09
>gb|KHN30191.1| Putative cellulose synthase A catalytic subunit 6 [UDP-forming]
[Glycine soja]
Length = 399
Score = 83.2 bits (204), Expect = 6e-14
Identities = 47/86 (54%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQ-XXXXXXXXXXXXXXXXXXXXXXXXXXX 284
VEIVG+NIATHA PA NG FGN G+PRSGQ
Sbjct: 314 VEIVGTNIATHAAPPAVNGTFGNPTGVPRSGQGRSGSLGRPRGGSRGRGSIQRGRGRGRG 373
Query: 283 XRDEKVSAEDLDADLEKYHSESMQLN 206
RDEKVSAEDLDADLEKYH+E+MQLN
Sbjct: 374 GRDEKVSAEDLDADLEKYHAEAMQLN 399
>ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isoform X1 [Glycine max]
Length = 243
Score = 83.2 bits (204), Expect = 6e-14
Identities = 47/86 (54%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQ-XXXXXXXXXXXXXXXXXXXXXXXXXXX 284
VEIVG+NIATHA PA NG FGN G+PRSGQ
Sbjct: 158 VEIVGTNIATHAAPPAVNGTFGNPTGVPRSGQGRSGSLGRPRGGSRGRGSIQRGRGRGRG 217
Query: 283 XRDEKVSAEDLDADLEKYHSESMQLN 206
RDEKVSAEDLDADLEKYH+E+MQLN
Sbjct: 218 GRDEKVSAEDLDADLEKYHAEAMQLN 243
>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor
binding protein, putative [Ricinus communis]
Length = 247
Score = 82.4 bits (202), Expect = 1e-13
Identities = 46/85 (54%), Positives = 49/85 (57%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
+EIVG+NIAT A PAANG FGNSNG PR GQ
Sbjct: 163 IEIVGTNIATPAATPAANGNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFGRGRGRGRG 222
Query: 280 RDEKVSAEDLDADLEKYHSESMQLN 206
R EKVSAEDLDADLEKYHSE+MQ N
Sbjct: 223 RGEKVSAEDLDADLEKYHSEAMQTN 247
>ref|XP_007150304.1| hypothetical protein PHAVU_005G142200g [Phaseolus vulgaris]
gi|593699733|ref|XP_007150305.1| hypothetical protein
PHAVU_005G142200g [Phaseolus vulgaris]
gi|561023568|gb|ESW22298.1| hypothetical protein
PHAVU_005G142200g [Phaseolus vulgaris]
gi|561023569|gb|ESW22299.1| hypothetical protein
PHAVU_005G142200g [Phaseolus vulgaris]
Length = 245
Score = 79.7 bits (195), Expect = 7e-13
Identities = 46/86 (53%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQ-XXXXXXXXXXXXXXXXXXXXXXXXXXX 284
VEIVG+NIATHA P NG FGNS G PRSGQ
Sbjct: 160 VEIVGTNIATHAAVPPVNGTFGNSGGPPRSGQGRSGLLGRPRGAPRGRGSSRRGRGGRGR 219
Query: 283 XRDEKVSAEDLDADLEKYHSESMQLN 206
RDEKVSAEDLDA+LEKYH+E+MQLN
Sbjct: 220 DRDEKVSAEDLDAELEKYHAEAMQLN 245
>gb|KHN32110.1| RNA and export factor-binding protein 2 [Glycine soja]
Length = 247
Score = 76.3 bits (186), Expect = 8e-12
Identities = 43/87 (49%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
+EIVG+NI+T VAPA NGA GN NG+PRSGQ
Sbjct: 161 IEIVGTNISTPGVAPAPNGAIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGG 220
Query: 280 RD--EKVSAEDLDADLEKYHSESMQLN 206
EKVSA+DLDADLEKYH+E+MQLN
Sbjct: 221 GGRGEKVSADDLDADLEKYHAEAMQLN 247
>ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571492362|ref|XP_006592205.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 76.3 bits (186), Expect = 8e-12
Identities = 43/87 (49%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
+EIVG+NI+T VAPA NGA GN NG+PRSGQ
Sbjct: 161 IEIVGTNISTPGVAPAPNGAIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGG 220
Query: 280 RD--EKVSAEDLDADLEKYHSESMQLN 206
EKVSA+DLDADLEKYH+E+MQLN
Sbjct: 221 GGRGEKVSADDLDADLEKYHAEAMQLN 247
>gb|KHN21975.1| RNA and export factor-binding protein 2 [Glycine soja]
Length = 247
Score = 74.3 bits (181), Expect = 3e-11
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
+EIVG+NI+T VAPA NGA GN +G+PRSGQ
Sbjct: 161 IEIVGTNISTPGVAPARNGAIGNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGRGG 220
Query: 280 RD--EKVSAEDLDADLEKYHSESMQLN 206
EKVSA+DLDADLEKYH+E+MQLN
Sbjct: 221 AGRGEKVSADDLDADLEKYHAEAMQLN 247
>ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571488643|ref|XP_006590992.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 74.3 bits (181), Expect = 3e-11
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
+EIVG+NI+T VAPA NGA GN +G+PRSGQ
Sbjct: 161 IEIVGTNISTPGVAPARNGAIGNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGRGG 220
Query: 280 RD--EKVSAEDLDADLEKYHSESMQLN 206
EKVSA+DLDADLEKYH+E+MQLN
Sbjct: 221 AGRGEKVSADDLDADLEKYHAEAMQLN 247
>gb|KHG01793.1| THO complex subunit 4 [Gossypium arboreum]
Length = 241
Score = 73.9 bits (180), Expect = 4e-11
Identities = 43/85 (50%), Positives = 48/85 (56%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
+EIVG+N++T AV AANG FGNSNG PR GQ
Sbjct: 158 IEIVGANVSTTAVPSAANGTFGNSNGAPRGGQ-GRGVGFGRQRGGVGGRGSGRGHGRGRG 216
Query: 280 RDEKVSAEDLDADLEKYHSESMQLN 206
R EKVS EDLDADLEKYHSE+MQ N
Sbjct: 217 RGEKVSTEDLDADLEKYHSEAMQTN 241
>ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Gossypium raimondii]
gi|763741358|gb|KJB08857.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741359|gb|KJB08858.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741360|gb|KJB08859.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741362|gb|KJB08861.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741363|gb|KJB08862.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
Length = 241
Score = 72.0 bits (175), Expect = 1e-10
Identities = 43/85 (50%), Positives = 47/85 (55%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
+EIVG+NIAT AANG FG+SNG PR GQ
Sbjct: 158 IEIVGTNIATPTAPSAANGTFGSSNGAPRGGQ-GRGGGFGRQRGGAGGRGFGRGRGQGKG 216
Query: 280 RDEKVSAEDLDADLEKYHSESMQLN 206
R EKVSAEDLDADLEKYHSE+MQ N
Sbjct: 217 RGEKVSAEDLDADLEKYHSEAMQTN 241
>gb|KHG13055.1| THO complex subunit 4 [Gossypium arboreum]
Length = 241
Score = 72.0 bits (175), Expect = 1e-10
Identities = 43/85 (50%), Positives = 47/85 (55%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
+EIVG+NIAT AANG FG+SNG PR GQ
Sbjct: 158 IEIVGTNIATPTAPSAANGTFGSSNGAPRGGQ-GRGGGFGRQRGGAGGRGFGRGRGQGKG 216
Query: 280 RDEKVSAEDLDADLEKYHSESMQLN 206
R EKVSAEDLDADLEKYHSE+MQ N
Sbjct: 217 RGEKVSAEDLDADLEKYHSEAMQTN 241
>ref|XP_007016490.1| RNA-binding family protein [Theobroma cacao]
gi|508786853|gb|EOY34109.1| RNA-binding family protein
[Theobroma cacao]
Length = 241
Score = 70.1 bits (170), Expect = 6e-10
Identities = 41/85 (48%), Positives = 46/85 (54%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
+EIVG+N+AT A NGAFGNSNG PR G
Sbjct: 158 IEIVGTNVATPGAPSAGNGAFGNSNGAPRGGH-GRGGGFGKQRGGGGGRGFGRGRGRGKG 216
Query: 280 RDEKVSAEDLDADLEKYHSESMQLN 206
R EKVSAEDLDA+LEKYHSE+MQ N
Sbjct: 217 RGEKVSAEDLDAELEKYHSEAMQTN 241
>ref|XP_010092777.1| RNA and export factor-binding protein 2 [Morus notabilis]
gi|587862438|gb|EXB52242.1| RNA and export
factor-binding protein 2 [Morus notabilis]
Length = 248
Score = 68.6 bits (166), Expect = 2e-09
Identities = 40/89 (44%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPA-ANGAFGNSNGIPRSGQ---XXXXXXXXXXXXXXXXXXXXXXXX 293
+EIVG+N+AT A P ANG+FGNSNG+PR GQ
Sbjct: 160 IEIVGTNVATPAAPPPPANGSFGNSNGLPRGGQGRGGGAFGRPRGGGGGGRGPRRGRGRG 219
Query: 292 XXXXRDEKVSAEDLDADLEKYHSESMQLN 206
EK+SA+DLDADLEKYH+E+MQ N
Sbjct: 220 QGRGTGEKISADDLDADLEKYHAEAMQEN 248
>gb|KDO72924.1| hypothetical protein CISIN_1g029981mg [Citrus sinensis]
gi|641854117|gb|KDO72925.1| hypothetical protein
CISIN_1g029981mg [Citrus sinensis]
gi|641854118|gb|KDO72926.1| hypothetical protein
CISIN_1g029981mg [Citrus sinensis]
gi|641854119|gb|KDO72927.1| hypothetical protein
CISIN_1g029981mg [Citrus sinensis]
Length = 184
Score = 68.2 bits (165), Expect = 2e-09
Identities = 39/84 (46%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQ-XXXXXXXXXXXXXXXXXXXXXXXXXXX 284
+EIVG+NIAT APAAN FGNSNG+PR GQ
Sbjct: 96 IEIVGTNIATRTAAPAANVNFGNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGR 155
Query: 283 XRDEKVSAEDLDADLEKYHSESMQ 212
R+EK+SAEDLDADL+KY+SE+ +
Sbjct: 156 ERNEKISAEDLDADLDKYYSEASE 179
>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 247
Score = 68.2 bits (165), Expect = 2e-09
Identities = 39/84 (46%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQ-XXXXXXXXXXXXXXXXXXXXXXXXXXX 284
+EIVG+NIAT APAAN FGNSNG+PR GQ
Sbjct: 159 IEIVGTNIATRTAAPAANVNFGNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGR 218
Query: 283 XRDEKVSAEDLDADLEKYHSESMQ 212
R+EK+SAEDLDADL+KY+SE+ +
Sbjct: 219 ERNEKISAEDLDADLDKYYSEASE 242
>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
gi|567864256|ref|XP_006424777.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864258|ref|XP_006424778.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864260|ref|XP_006424779.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526710|gb|ESR38016.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526711|gb|ESR38017.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526712|gb|ESR38018.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526713|gb|ESR38019.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
Length = 247
Score = 68.2 bits (165), Expect = 2e-09
Identities = 39/84 (46%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQ-XXXXXXXXXXXXXXXXXXXXXXXXXXX 284
+EIVG+NIAT APAAN FGNSNG+PR GQ
Sbjct: 159 IEIVGTNIATRTAAPAANVNFGNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGR 218
Query: 283 XRDEKVSAEDLDADLEKYHSESMQ 212
R+EK+SAEDLDADL+KY+SE+ +
Sbjct: 219 ERNEKISAEDLDADLDKYYSEASE 242
>ref|XP_012472781.1| PREDICTED: THO complex subunit 4A-like [Gossypium raimondii]
gi|763754210|gb|KJB21541.1| hypothetical protein
B456_004G004300 [Gossypium raimondii]
gi|763754211|gb|KJB21542.1| hypothetical protein
B456_004G004300 [Gossypium raimondii]
Length = 241
Score = 67.8 bits (164), Expect = 3e-09
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
+EIVG+NI+T AANG FGNSNG R GQ
Sbjct: 158 IEIVGANISTPVAPSAANGTFGNSNGATRGGQ-GRGVGFGRQRGGIGGRGSGRGHGRGRG 216
Query: 280 RDEKVSAEDLDADLEKYHSESMQLN 206
R EK+S EDLDADLEKYHSE+MQ N
Sbjct: 217 RGEKISTEDLDADLEKYHSEAMQTN 241
>ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 67.8 bits (164), Expect = 3e-09
Identities = 44/86 (51%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = -2
Query: 460 VEIVGSNIATHA-VAPAANGAFGNSNGIPRSGQXXXXXXXXXXXXXXXXXXXXXXXXXXX 284
+EIVG+NIAT A V P NG FGNSNG RS Q
Sbjct: 159 IEIVGTNIATPAAVPPVTNGTFGNSNGGLRSAQ-GRVGSQGRPRGGSGGRGFGRGRGRGR 217
Query: 283 XRDEKVSAEDLDADLEKYHSESMQLN 206
R EKVSAEDLDADLEKYHSE+MQ+N
Sbjct: 218 GRGEKVSAEDLDADLEKYHSEAMQIN 243
>ref|XP_012471387.1| PREDICTED: THO complex subunit 4A [Gossypium raimondii]
gi|763752760|gb|KJB20148.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
gi|763752761|gb|KJB20149.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
gi|763752762|gb|KJB20150.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
Length = 241
Score = 67.4 bits (163), Expect = 4e-09
Identities = 40/85 (47%), Positives = 46/85 (54%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
+EIVG+NIAT A AN AFG+SNG PR G+
Sbjct: 158 IEIVGTNIATPAAPTVANVAFGSSNGAPRGGRGRGGGFRRQRGVAGGRGFGRGRGQGRGR 217
Query: 280 RDEKVSAEDLDADLEKYHSESMQLN 206
EKVSAEDLDADLEKYH+E+MQ N
Sbjct: 218 G-EKVSAEDLDADLEKYHTEAMQTN 241
>gb|KHG17012.1| THO complex subunit 4 [Gossypium arboreum]
gi|728837570|gb|KHG17013.1| THO complex subunit 4
[Gossypium arboreum]
Length = 241
Score = 67.4 bits (163), Expect = 4e-09
Identities = 40/85 (47%), Positives = 46/85 (54%)
Frame = -2
Query: 460 VEIVGSNIATHAVAPAANGAFGNSNGIPRSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
+EIVG+NIAT A AN AFG+SNG PR G+
Sbjct: 158 IEIVGTNIATPAAPTVANVAFGSSNGAPRGGRGRGGGFRRQRGVAGGRGFGRGRGQGRGR 217
Query: 280 RDEKVSAEDLDADLEKYHSESMQLN 206
EKVSAEDLDADLEKYH+E+MQ N
Sbjct: 218 G-EKVSAEDLDADLEKYHTEAMQTN 241