BLASTX nr result

ID: Cinnamomum23_contig00046910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00046910
         (300 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]    66   1e-08
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]    62   1e-07
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]    61   3e-07
ref|XP_010088408.1| Retrovirus-related Pol polyprotein from tran...    56   8e-06

>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 11/110 (10%)
 Frame = -2

Query: 299 ITLCFSNNKLV-LSDTLYVSSLRWNLISVSSLVNKSYSITFG----TEVVIKKNGTFICS 135
           I L F NN+++ L + LYV S+R NLISVSSL    YS+ F       VVIK     ICS
Sbjct: 307 IALNFKNNRILSLKNVLYVPSIRRNLISVSSLSKNGYSVCFNEFYDDSVVIKFREQIICS 366

Query: 134 GKVTNGLYLL--TPTMYEIHDTEITN---RPSLKRKSP-SSNPTKLWH*R 3
           G + +GLY+L  TP + ++ ++E+ N      LKRK P   + T LWH R
Sbjct: 367 GSLIDGLYILKVTPEL-QLTNSEVNNFDIVAPLKRKCPIELSYTYLWHLR 415


>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
          Length = 961

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
 Frame = -2

Query: 299 ITLCFSNNK-LVLSDTLYVSSLRWNLISVSSLVNKSYSITFGTEVV-IKKNGTFICSGKV 126
           + L F+NNK L+L +  ++   + NLISVS L  +   ++F  + V I KNG  ICSG V
Sbjct: 266 VXLSFANNKYLLLHNVYFIPDFKRNLISVSKLHEQFIXVSFDIDSVSIYKNGMNICSGYV 325

Query: 125 TNGLYLLTPTMYEIHDTEI--TNRPSLKRK--SPSSNPTKLWH*R 3
            NG+Y + P    +  TE+     P+ KR+  S   N T LWH R
Sbjct: 326 DNGIYFVKPIFNNLLQTEMFKVAEPTPKRRKISNDKNDTYLWHLR 370


>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
 Frame = -2

Query: 299 ITLCFSNNK-LVLSDTLYVSSLRWNLISVSSLVNKSYSITFG----TEVVIKKNGTFICS 135
           I L F NN+ L L + LYV S+R NLI +SSL    YS+ F       VVIK     ICS
Sbjct: 659 IALNFKNNRTLFLKNVLYVPSIRRNLIPISSLSKNGYSVCFNEFYDDSVVIKFREQMICS 718

Query: 134 GKVTNGLYLL--TPTMYEIHDTEITN---RPSLKRKSP-SSNPTKLWH*R 3
           G + + LY+L  TP + ++ ++E+ N      LKRK P   + T LWH R
Sbjct: 719 GSLIDSLYILKVTPEL-QLTNSEVNNFDIVAPLKRKRPIELSYTYLWHLR 767


>ref|XP_010088408.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis] gi|587844865|gb|EXB35423.1|
           Retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Morus notabilis]
          Length = 443

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
 Frame = -2

Query: 299 ITLCFSNNK-LVLSDTLYVSSLRWNLISVSSLVNKSYSITFGTEVV-IKKNGTFICSGKV 126
           + L F  NK LVL++  ++  +R NLIS+S L  + + + F  + V I +NG  I SG++
Sbjct: 251 VRLHFRENKFLVLNNVYFIPDIRRNLISMSKLFEQFFKVYFVNDFVHISRNGLNIYSGRL 310

Query: 125 TNGLYLLTPTMYEIHDTE---ITNRPSLKRKSPSSNPTKLWH 9
            +GLY + P    + +TE   +    + K+K    N T LWH
Sbjct: 311 DDGLYCIKPIPNSLLNTEMFRVAEPKNKKQKISHENNTYLWH 352


Top