BLASTX nr result

ID: Cinnamomum23_contig00046716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00046716
         (246 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010246108.1| PREDICTED: pentatricopeptide repeat-containi...    73   6e-11
ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containi...    69   2e-09
ref|XP_007139254.1| hypothetical protein PHAVU_008G014200g [Phas...    62   2e-07
ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containi...    60   7e-07
gb|KHN27212.1| Pentatricopeptide repeat-containing protein [Glyc...    58   3e-06
ref|XP_012852438.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06
emb|CDP11859.1| unnamed protein product [Coffea canephora]             56   8e-06

>ref|XP_010246108.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Nelumbo nucifera]
          Length = 738

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = +2

Query: 47  LDFHEEDD-ANAVDLDIFYTSLFDYCTHQKHLTQIHSHLIKSGSLESNYLVTKFVHTSSN 223
           LD+ +E++  +++  D FY  L D  TH+KHL QIH+ LI +G   SNYL TKFVH SSN
Sbjct: 51  LDYPDENNNLSSISSDSFYAFLLDNLTHKKHLVQIHAQLIVAGFQNSNYLATKFVHASSN 110

Query: 224 LGEIQYA 244
            GEI YA
Sbjct: 111 AGEIHYA 117


>ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera] gi|296081235|emb|CBI17979.3| unnamed
           protein product [Vitis vinifera]
          Length = 742

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 32/66 (48%), Positives = 45/66 (68%)
 Frame = +2

Query: 47  LDFHEEDDANAVDLDIFYTSLFDYCTHQKHLTQIHSHLIKSGSLESNYLVTKFVHTSSNL 226
           LD  +    +  D D F++SL D+  H++HL QIH+ L+ SG +ES +LVTKFV+ S N+
Sbjct: 57  LDHSDYIPYSGFDFDSFFSSLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNI 116

Query: 227 GEIQYA 244
           GEI YA
Sbjct: 117 GEIGYA 122


>ref|XP_007139254.1| hypothetical protein PHAVU_008G014200g [Phaseolus vulgaris]
           gi|593331658|ref|XP_007139255.1| hypothetical protein
           PHAVU_008G014200g [Phaseolus vulgaris]
           gi|561012387|gb|ESW11248.1| hypothetical protein
           PHAVU_008G014200g [Phaseolus vulgaris]
           gi|561012388|gb|ESW11249.1| hypothetical protein
           PHAVU_008G014200g [Phaseolus vulgaris]
          Length = 727

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
 Frame = +2

Query: 53  FHEEDDAN---AVDLDIFYTSLFDYCTHQKHLTQIHSHLIKSGSLESNYLVTKFVHTSSN 223
           FH +   N   +V+ D FY SL D  TH++HL QIH+ L+ SG   + +L+TK V+ SSN
Sbjct: 41  FHPQHSVNHDRSVNSDSFYASLIDNSTHKRHLDQIHNQLVVSGLQHNGFLMTKLVNGSSN 100

Query: 224 LGEIQYA 244
           L +I YA
Sbjct: 101 LAQICYA 107


>ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = +2

Query: 89  DIFYTSLFDYCTHQKHLTQIHSHLIKSGSLESNYLVTKFVHTSSNLGEIQYA 244
           D FY SL D  TH++HL QIH+ L+ SG   + +L+TK V+ SSNLG+I YA
Sbjct: 56  DSFYASLIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYA 107


>gb|KHN27212.1| Pentatricopeptide repeat-containing protein [Glycine soja]
          Length = 433

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 28/63 (44%), Positives = 40/63 (63%)
 Frame = +2

Query: 56  HEEDDANAVDLDIFYTSLFDYCTHQKHLTQIHSHLIKSGSLESNYLVTKFVHTSSNLGEI 235
           H  +  +  + D FY SL D  TH++H  QIH+ L+ SG   + +L+TK V+ SSNLG+I
Sbjct: 20  HFVNHGHCFNSDSFYASLIDNSTHKRHRDQIHNQLVISGLQHNGFLMTKVVNGSSNLGQI 79

Query: 236 QYA 244
            YA
Sbjct: 80  CYA 82


>ref|XP_012852438.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Erythranthe guttatus]
          Length = 710

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 26/57 (45%), Positives = 38/57 (66%)
 Frame = +2

Query: 74  NAVDLDIFYTSLFDYCTHQKHLTQIHSHLIKSGSLESNYLVTKFVHTSSNLGEIQYA 244
           ++ D + F+TSL +   H  HL QIH+ L   G  E+ +++TKF++TSSNL EI YA
Sbjct: 34  SSTDDESFFTSLLEKSAHTAHLNQIHNQLYIHGLHENGFIITKFINTSSNLREIDYA 90


>emb|CDP11859.1| unnamed protein product [Coffea canephora]
          Length = 747

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 24/52 (46%), Positives = 33/52 (63%)
 Frame = +2

Query: 89  DIFYTSLFDYCTHQKHLTQIHSHLIKSGSLESNYLVTKFVHTSSNLGEIQYA 244
           + +YTSL    TH+  L QIH+ L   G   + Y++TKF+H  SN+GEI YA
Sbjct: 76  EAYYTSLLSKSTHKSFLNQIHAQLFTFGLQNNGYIITKFIHVGSNIGEIIYA 127


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