BLASTX nr result

ID: Cinnamomum23_contig00046437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00046437
         (284 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010921583.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    60   4e-07
ref|XP_010274421.1| PREDICTED: F-box protein SKIP23-like [Nelumb...    57   5e-06
ref|XP_004287754.1| PREDICTED: F-box protein SKIP23-like [Fragar...    56   8e-06
ref|XP_004287753.1| PREDICTED: F-box protein SKIP23-like [Fragar...    56   8e-06

>ref|XP_010921583.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At2g26160-like
           [Elaeis guineensis]
          Length = 407

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 30/73 (41%), Positives = 44/73 (60%)
 Frame = -1

Query: 248 LKGSGSTMGFKVYELGLKDETGDSKENPVEVKSLDDRVMFLGLNSSMLVTASHFSGLEGN 69
           L+   +T GF+V++L    E    +  PVE+KSL D ++FLG NSS  ++   F G +GN
Sbjct: 284 LRRQYTTTGFEVFKLDRSSE----EARPVELKSLGDHILFLGKNSSFALSTKDFPGWKGN 339

Query: 68  CIYFTEDNTNLFF 30
           CIYFT    N+ +
Sbjct: 340 CIYFTASYFNIIY 352


>ref|XP_010274421.1| PREDICTED: F-box protein SKIP23-like [Nelumbo nucifera]
          Length = 216

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/62 (48%), Positives = 39/62 (62%)
 Frame = -1

Query: 230 TMGFKVYELGLKDETGDSKENPVEVKSLDDRVMFLGLNSSMLVTASHFSGLEGNCIYFTE 51
           T GFKV++L   +E        VEVKS+ DRV+FLG N S+ ++A  F     NCIYFT+
Sbjct: 111 TGGFKVFKL---EERSSMNPRWVEVKSIGDRVLFLGDNYSVSISAREFPECSANCIYFTD 167

Query: 50  DN 45
           DN
Sbjct: 168 DN 169


>ref|XP_004287754.1| PREDICTED: F-box protein SKIP23-like [Fragaria vesca subsp. vesca]
           gi|470102632|ref|XP_004287755.1| PREDICTED: F-box
           protein SKIP23-like [Fragaria vesca subsp. vesca]
          Length = 388

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = -1

Query: 254 RMLKGSGSTMGFKVYELGLKDETGDSKENP-VEVKSLDDRVMFLGLNSSMLVTASHFSGL 78
           R   G    + FKVY+L    E GD + +  VEV SLDD+V FL  + S  V+A   +G 
Sbjct: 274 RFRSGELKVVDFKVYKL----EWGDGELSRWVEVNSLDDQVFFLANDCSFAVSAQELAGY 329

Query: 77  EGNCIYFTEDN 45
           +GNCIYFT++N
Sbjct: 330 KGNCIYFTDEN 340


>ref|XP_004287753.1| PREDICTED: F-box protein SKIP23-like [Fragaria vesca subsp. vesca]
          Length = 389

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = -1

Query: 254 RMLKGSGSTMGFKVYELGLKDETGDSKENP-VEVKSLDDRVMFLGLNSSMLVTASHFSGL 78
           R   G    + FKVY+L    E GD + +  VEV SLDD+V FL  + S  V+A   +G 
Sbjct: 275 RFRSGELKVVDFKVYKL----EWGDGELSRWVEVNSLDDQVFFLANDCSFAVSAQELAGY 330

Query: 77  EGNCIYFTEDN 45
           +GNCIYFT++N
Sbjct: 331 KGNCIYFTDEN 341


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