BLASTX nr result
ID: Cinnamomum23_contig00046393
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00046393
(576 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 141 3e-38
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 137 3e-35
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 137 5e-35
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 135 4e-34
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 135 2e-33
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 143 4e-33
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 142 7e-33
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop... 137 2e-32
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 140 3e-32
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 139 4e-32
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 139 5e-32
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 129 1e-31
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 138 1e-31
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 137 2e-31
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 137 2e-31
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 137 2e-31
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 136 3e-31
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 136 3e-31
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 137 4e-31
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 137 4e-31
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 141 bits (355), Expect(3) = 3e-38
Identities = 71/134 (52%), Positives = 94/134 (70%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGID 298
EE+ES KNQT ELV+ P+ +K+VGC+WVFK KEG E+ R+KARLV KG++Q+EG+D
Sbjct: 925 EEMESLHKNQTWELVRIPQGRKVVGCKWVFKRKEGTSEGESVRYKARLVAKGFSQREGVD 984
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
+N++FS VV+H+SI+ +Q DVK FLHG+LE I M Q EGF + GKE
Sbjct: 985 YNEIFSPVVRHTSIRVLLAMVAHFDLELEQLDVKTAFLHGELEEDILMSQPEGFVVPGKE 1044
Query: 479 EHVC*LKKSLYDLR 520
+ C LKKSLY L+
Sbjct: 1045 KFACSLKKSLYGLK 1058
Score = 38.5 bits (88), Expect(3) = 3e-38
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 9 EDLVAYAHDTAESIET-KPVTYLDVITSKGSAKWIVAM 119
E+++ YA AE IE+ +P++Y + ++S SAKW+VAM
Sbjct: 886 EEMIGYALHVAEDIESPEPMSYKEAVSSNESAKWLVAM 923
Score = 26.2 bits (56), Expect(3) = 3e-38
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3
Query: 522 QWYKHFDTFMV 554
QWYK FD+FMV
Sbjct: 1063 QWYKRFDSFMV 1073
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 137 bits (344), Expect(3) = 3e-35
Identities = 71/134 (52%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFKKE-GIPTMENARFKARLVTKGYTQKEGID 298
EE ES KN T +LV PK K+VGC+WVFKK+ GIP +E RFKA LV K YTQ+EG+D
Sbjct: 479 EEFESLLKNGTWQLVDKPKGCKVVGCKWVFKKKLGIPHVEPERFKATLVAKAYTQREGMD 538
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
FN++FS +VKH+SI+ Q DV FLHG+LE I+M Q +GF ++GKE
Sbjct: 539 FNEIFSPMVKHTSIRVLLALVSLWNLELXQMDVNRAFLHGELEEEIFMQQPKGFIVKGKE 598
Query: 479 EHVC*LKKSLYDLR 520
VC LK+SLY L+
Sbjct: 599 NQVCLLKRSLYGLK 612
Score = 35.0 bits (79), Expect(3) = 3e-35
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 GHEDLVAYAHDTAESIE-TKPVTYLDVITSKGSAKWIVAM 119
G+ D+VAY+ E + +P YL+ I+ K S KW+ AM
Sbjct: 438 GYNDMVAYSLSIGEELSCAEPKNYLEAISCKDSPKWMTAM 477
Score = 23.9 bits (50), Expect(3) = 3e-35
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 522 QWYKHFDTFM 551
QWYK FD FM
Sbjct: 617 QWYKRFDKFM 626
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 137 bits (344), Expect(3) = 5e-35
Identities = 72/134 (53%), Positives = 91/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGID 298
EE++S +KN T ELV PK +K V C+W+FK KEG+ E RFKARLV KG++Q G+D
Sbjct: 827 EEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIVGVD 886
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
+N VFS VVKHSSI+ +Q DVK FLHG+LE IYM Q EGF + GKE
Sbjct: 887 YNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKE 946
Query: 479 EHVC*LKKSLYDLR 520
++VC LK+SLY L+
Sbjct: 947 DYVCKLKRSLYGLK 960
Score = 32.7 bits (73), Expect(3) = 5e-35
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 12 DLVAYAHDTAESIET--KPVTYLDVITSKGSAKWIVAM 119
D+V YA AE +E +P TY + + S KWI AM
Sbjct: 788 DMVYYAFSCAEQVENTLEPATYTEAVVSGDREKWISAM 825
Score = 25.4 bits (54), Expect(3) = 5e-35
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 522 QWYKHFDTFMVGN 560
QWYK FD+FM+ +
Sbjct: 965 QWYKRFDSFMLSH 977
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 135 bits (341), Expect(3) = 4e-34
Identities = 71/134 (52%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGID 298
EE++S +KN T ELV PK +K V C+W+FK KEG+ E RFK RLV KG++Q G+D
Sbjct: 827 EEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKVRLVAKGFSQIAGVD 886
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
+N VFS VVKHSSI+ +Q DVK FLHG+LE IYM Q EGF + GKE
Sbjct: 887 YNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKE 946
Query: 479 EHVC*LKKSLYDLR 520
++VC LK+SLY L+
Sbjct: 947 DYVCKLKRSLYGLK 960
Score = 30.8 bits (68), Expect(3) = 4e-34
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 12 DLVAYAHDTAESIET--KPVTYLDVITSKGSAKWIVAM 119
D+V YA AE +E +P TY + + S KWI A+
Sbjct: 788 DMVYYAFSYAEQVENTLEPATYTEAVVSGDREKWISAI 825
Score = 25.4 bits (54), Expect(3) = 4e-34
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 522 QWYKHFDTFMVGN 560
QWYK FD+FM+ +
Sbjct: 965 QWYKRFDSFMLSH 977
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 135 bits (339), Expect(3) = 2e-33
Identities = 71/134 (52%), Positives = 91/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGID 298
EE++S +KN T +LV PK +K V C+W+FK KEG+ E RFKARLV KG++Q G+D
Sbjct: 160 EEMQSLEKNGTWKLVHLPKQKKPVHCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIAGVD 219
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
+N VFS VVKHSSI+ +Q DVK FLHG+LE IYM Q EGF + GKE
Sbjct: 220 YNDVFSPVVKHSSIRTFFSIVAMDDLELKQLDVKTTFLHGELEDEIYMDQPEGFIVPGKE 279
Query: 479 EHVC*LKKSLYDLR 520
++VC LK+SLY L+
Sbjct: 280 DYVCKLKRSLYGLK 293
Score = 29.3 bits (64), Expect(3) = 2e-33
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 12 DLVAYAHDTAESIET--KPVTYLDVITSKGSAKWIVAM 119
D+V YA E +E +P TY + + S WI AM
Sbjct: 121 DMVYYAFSCVEQVENTLEPATYTEAVVSGDRENWISAM 158
Score = 25.4 bits (54), Expect(3) = 2e-33
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 522 QWYKHFDTFMVGN 560
QWYK FD+FM+ +
Sbjct: 298 QWYKRFDSFMLSH 310
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 143 bits (360), Expect(2) = 4e-33
Identities = 69/135 (51%), Positives = 94/135 (69%), Gaps = 1/135 (0%)
Frame = +2
Query: 119 GEEIESFDKNQT*ELVKPPKSQKIVGCEWVFKK-EGIPTMENARFKARLVTKGYTQKEGI 295
G+E+ES KNQT +LV P +KI+ C+WVFKK EGI E ++KAR+V +G+ Q+EG+
Sbjct: 811 GDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGV 870
Query: 296 DFNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGK 475
D+N++FS VV+H+SI+ +Q DVK FLHG+LE IYM Q +GF++ GK
Sbjct: 871 DYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGK 930
Query: 476 EEHVC*LKKSLYDLR 520
E HVC LKKSLY L+
Sbjct: 931 ENHVCKLKKSLYGLK 945
Score = 25.0 bits (53), Expect(2) = 4e-33
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 522 QWYKHFDTFMV 554
QWYK FD++MV
Sbjct: 950 QWYKRFDSYMV 960
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 142 bits (357), Expect(2) = 7e-33
Identities = 74/134 (55%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGID 298
+E+ES +KN T ELVK PK +K + C+W+FK KEGI + + AR+KARL+ KGY+Q GID
Sbjct: 1044 DEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPGID 1103
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
FN VFS VVKHSSI+ +Q DVK FLHG+LE IYM Q +GF + GKE
Sbjct: 1104 FNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKE 1163
Query: 479 EHVC*LKKSLYDLR 520
VC LKKSLY L+
Sbjct: 1164 NLVCRLKKSLYGLK 1177
Score = 25.4 bits (54), Expect(2) = 7e-33
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
Frame = +3
Query: 522 QWYKHFDTFMVG----NDNYKS 575
QWYK FD+FM+ NY S
Sbjct: 1182 QWYKRFDSFMLSQKFRRSNYDS 1203
>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1166
Score = 137 bits (346), Expect(2) = 2e-32
Identities = 69/134 (51%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGID 298
EE++S K+ T +L++ P+ QK++GC+W+FK K GIP +E R+KARLV KG++Q+EGID
Sbjct: 754 EEMDSHKKSHTWDLIEKPEKQKLIGCKWIFKLKPGIPGVEKQRYKARLVAKGFSQQEGID 813
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
+N+VFSLVVKH SI+ +Q DVK FLHG LE I M Q EGF +G E
Sbjct: 814 YNEVFSLVVKHVSIRLMLSLMVNMDYELEQMDVKTAFLHGNLEERILMSQPEGFIQEGNE 873
Query: 479 EHVC*LKKSLYDLR 520
VC L+KSLY L+
Sbjct: 874 NKVCLLRKSLYGLK 887
Score = 28.5 bits (62), Expect(2) = 2e-32
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 9 EDLVAYAHDTAESI-ETKPVTYLDVITSKGSAKWIVAM 119
ED VAYA TAE + E +P +Y + + S +W AM
Sbjct: 715 EDFVAYALATAEDLEEEEPKSYEEALKSSKRKQWENAM 752
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 140 bits (352), Expect(2) = 3e-32
Identities = 74/134 (55%), Positives = 91/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGID 298
+E+ES +KN T ELVK PK +K + C+W+FK KEG+ + AR+KARLV KGY+Q GID
Sbjct: 809 DEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGID 868
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
FN VFS VVKHSSI+ +Q +VK FLHG+LE IYM Q EGF + GKE
Sbjct: 869 FNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKE 928
Query: 479 EHVC*LKKSLYDLR 520
VC LKKSLY L+
Sbjct: 929 NLVCRLKKSLYGLK 942
Score = 25.4 bits (54), Expect(2) = 3e-32
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
Frame = +3
Query: 522 QWYKHFDTFMVGN----DNYKS 575
QWYK FD+FM+ NY S
Sbjct: 947 QWYKRFDSFMLSQKFRISNYDS 968
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 139 bits (351), Expect(2) = 4e-32
Identities = 74/134 (55%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGID 298
+E+ES +KN T ELVK PK +K + C+W+FK K+GI + A +KARLV KGY+Q GID
Sbjct: 619 DEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGISPSDEAMYKARLVAKGYSQIPGID 678
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
FN VFS VVKHSSI+ +Q DVK FLHG+LE IYM Q EGF + GKE
Sbjct: 679 FNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQSEGFVVPGKE 738
Query: 479 EHVC*LKKSLYDLR 520
VC LKKSLY L+
Sbjct: 739 NLVCRLKKSLYGLK 752
Score = 25.4 bits (54), Expect(2) = 4e-32
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
Frame = +3
Query: 522 QWYKHFDTFMVG----NDNYKS 575
QWYK FD+FM+ NY S
Sbjct: 757 QWYKRFDSFMLSQKFRRSNYDS 778
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 139 bits (351), Expect(2) = 5e-32
Identities = 73/134 (54%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGID 298
+E+ES +KN T ELVK PK +K + C+W+FK KEG+ + AR+KARLV KGY+Q ID
Sbjct: 579 DEMESLEKNHTWELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPSID 638
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
FN VFS +VKHSSI+ +Q DVK FLHG+LE IYM Q EGF + GKE
Sbjct: 639 FNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKE 698
Query: 479 EHVC*LKKSLYDLR 520
VC LKKSLY L+
Sbjct: 699 NLVCRLKKSLYGLK 712
Score = 25.0 bits (53), Expect(2) = 5e-32
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 522 QWYKHFDTFMV 554
QWYK FD+FM+
Sbjct: 717 QWYKRFDSFML 727
>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1131
Score = 129 bits (325), Expect(3) = 1e-31
Identities = 69/133 (51%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
Frame = +2
Query: 125 EIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGIDF 301
E++ +KN T ELV PK +K V C+W+FK KEG+ E RFKA LV KG++Q G+D+
Sbjct: 719 EMQPLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKATLVAKGFSQIAGVDY 778
Query: 302 NKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKEE 481
N VFS VVKHSSI+ +Q DVK FLHG+LEV IYM Q EGF + GKE+
Sbjct: 779 NDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTTFLHGELEVEIYMDQPEGFIVPGKED 838
Query: 482 HVC*LKKSLYDLR 520
+VC LK+SL L+
Sbjct: 839 YVCKLKRSLDGLK 851
Score = 28.9 bits (63), Expect(3) = 1e-31
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 12 DLVAYAHDTAESIET--KPVTYLDVITSKGSAKWIVAM 119
D+V YA AE +E + TY + + S KWI AM
Sbjct: 679 DIVYYAFSCAEQVENTLELATYTEAVVSGDREKWISAM 716
Score = 25.4 bits (54), Expect(3) = 1e-31
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 522 QWYKHFDTFMVGN 560
QWYK FD+FM+ +
Sbjct: 856 QWYKRFDSFMLSH 868
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 138 bits (347), Expect(2) = 1e-31
Identities = 73/134 (54%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGID 298
+E+ES +KN + EL K PK +K + C+W+FK KEG+ + AR+KARLV KGY+Q GID
Sbjct: 746 DEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGID 805
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
FN VFS VVKHSSI+ +Q DVK FLHG+LE IYM Q EGF + GKE
Sbjct: 806 FNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKE 865
Query: 479 EHVC*LKKSLYDLR 520
VC LKKSLY L+
Sbjct: 866 NLVCRLKKSLYGLK 879
Score = 25.4 bits (54), Expect(2) = 1e-31
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
Frame = +3
Query: 522 QWYKHFDTFMVG----NDNYKS 575
QWYK FD+FM+ NY S
Sbjct: 884 QWYKRFDSFMLSQKFRRSNYDS 905
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 137 bits (345), Expect(2) = 2e-31
Identities = 72/134 (53%), Positives = 89/134 (66%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGID 298
+E+ES KN T E VK PK +K + C+W+FK KEG+ + AR+KARLV KGY+Q GID
Sbjct: 872 DEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGID 931
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
FN VFS ++KHSSI+ +Q DVK FLHG+LE IYM Q EGF + GKE
Sbjct: 932 FNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKE 991
Query: 479 EHVC*LKKSLYDLR 520
VC LKKSLY L+
Sbjct: 992 NLVCRLKKSLYGLK 1005
Score = 25.4 bits (54), Expect(2) = 2e-31
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
Frame = +3
Query: 522 QWYKHFDTFMVG----NDNYKS 575
QWYK FD+FM+ NY S
Sbjct: 1010 QWYKRFDSFMLSQKFRRSNYDS 1031
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 137 bits (345), Expect(2) = 2e-31
Identities = 72/134 (53%), Positives = 89/134 (66%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGID 298
+E+ES KN T E VK PK +K + C+W+FK KEG+ + AR+KARLV KGY+Q GID
Sbjct: 872 DEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGID 931
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
FN VFS ++KHSSI+ +Q DVK FLHG+LE IYM Q EGF + GKE
Sbjct: 932 FNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKE 991
Query: 479 EHVC*LKKSLYDLR 520
VC LKKSLY L+
Sbjct: 992 NLVCRLKKSLYGLK 1005
Score = 25.4 bits (54), Expect(2) = 2e-31
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
Frame = +3
Query: 522 QWYKHFDTFMVG----NDNYKS 575
QWYK FD+FM+ NY S
Sbjct: 1010 QWYKRFDSFMLSQKFRRSNYDS 1031
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 137 bits (345), Expect(2) = 2e-31
Identities = 74/134 (55%), Positives = 89/134 (66%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGID 298
+E+ES +KN T ELVK PK +K + C+W+FK KE I + A +KARLV KGY+Q GID
Sbjct: 223 DEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKECISPSDEAMYKARLVAKGYSQIPGID 282
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
FN VFS VVKHSSI+ +Q DVK FLHG+LE IYM Q EGF + GKE
Sbjct: 283 FNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKE 342
Query: 479 EHVC*LKKSLYDLR 520
VC LKKSLY L+
Sbjct: 343 NLVCRLKKSLYGLK 356
Score = 25.4 bits (54), Expect(2) = 2e-31
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
Frame = +3
Query: 522 QWYKHFDTFMVG----NDNYKS 575
QWYK FD+FM+ NY S
Sbjct: 361 QWYKRFDSFMLSQKFRRSNYDS 382
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 136 bits (343), Expect(2) = 3e-31
Identities = 72/131 (54%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Frame = +2
Query: 131 ESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGIDFNK 307
E +KN T ELVK PK K + C+W+FK KEG+ + AR+KARLV KGY+Q GIDFN
Sbjct: 766 EELEKNHTWELVKLPKENKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFND 825
Query: 308 VFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKEEHV 487
+FS VVKHSSI+ +Q DVK FLHG+LE IYM Q EGF + GKE V
Sbjct: 826 IFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLV 885
Query: 488 C*LKKSLYDLR 520
C LKKSLY L+
Sbjct: 886 CRLKKSLYGLK 896
Score = 25.4 bits (54), Expect(2) = 3e-31
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
Frame = +3
Query: 522 QWYKHFDTFMVG----NDNYKS 575
QWYK FD+FM+ NY S
Sbjct: 901 QWYKRFDSFMLSQKFRRSNYDS 922
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 136 bits (343), Expect(2) = 3e-31
Identities = 72/131 (54%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Frame = +2
Query: 131 ESFDKNQT*ELVKPPKSQKIVGCEWVFK-KEGIPTMENARFKARLVTKGYTQKEGIDFNK 307
E +KN T ELVK PK K + C+W+FK KEG+ + AR+KARLV KGY+Q GIDFN
Sbjct: 598 EELEKNHTWELVKLPKENKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFND 657
Query: 308 VFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKEEHV 487
+FS VVKHSSI+ +Q DVK FLHG+LE IYM Q EGF + GKE V
Sbjct: 658 IFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLV 717
Query: 488 C*LKKSLYDLR 520
C LKKSLY L+
Sbjct: 718 CRLKKSLYGLK 728
Score = 25.4 bits (54), Expect(2) = 3e-31
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
Frame = +3
Query: 522 QWYKHFDTFMVG----NDNYKS 575
QWYK FD+FM+ NY S
Sbjct: 733 QWYKRFDSFMLSQKFRRSNYDS 754
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 137 bits (344), Expect(2) = 4e-31
Identities = 66/134 (49%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVFKK-EGIPTMENARFKARLVTKGYTQKEGID 298
+E+ES +NQT L+ P +++++ C+W+FK+ EGIP +E ++KARLV +G+TQ+EG+D
Sbjct: 835 DEMESLQRNQTWTLIPNPGNKRLINCKWIFKRNEGIPDVEPPKYKARLVARGFTQREGVD 894
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
FN++FS VVKHSSI+ +Q DVK FLHG LE I M Q EGFE + KE
Sbjct: 895 FNEIFSPVVKHSSIRILLAMVALLDLELEQMDVKTAFLHGNLEEQILMAQPEGFECKDKE 954
Query: 479 EHVC*LKKSLYDLR 520
++VC L KSLY L+
Sbjct: 955 DYVCLLHKSLYGLK 968
Score = 24.6 bits (52), Expect(2) = 4e-31
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 522 QWYKHFDTFMVGNDNYKS 575
QWY+ FD FMV +S
Sbjct: 973 QWYRRFDDFMVSKGYRRS 990
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 137 bits (344), Expect(2) = 4e-31
Identities = 73/134 (54%), Positives = 89/134 (66%), Gaps = 1/134 (0%)
Frame = +2
Query: 122 EEIESFDKNQT*ELVKPPKSQKIVGCEWVF-KKEGIPTMENARFKARLVTKGYTQKEGID 298
EE+ES KN ELV PK +K+VGC+WVF KKEGI + +KARLV KGY+QKEG+D
Sbjct: 803 EEMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEGVD 862
Query: 299 FNKVFSLVVKHSSIQXXXXXXXXXXXXXQQFDVKNVFLHGKLEVYIYMHQREGFEIQGKE 478
++++FS VVKH+SI+ +Q DVK FLHG LE IYM Q EGF GKE
Sbjct: 863 YDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKE 922
Query: 479 EHVC*LKKSLYDLR 520
VC LKKSLY L+
Sbjct: 923 NLVCRLKKSLYGLK 936
Score = 24.6 bits (52), Expect(2) = 4e-31
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 522 QWYKHFDTFMV 554
QWYK FDT+M+
Sbjct: 941 QWYKPFDTYML 951