BLASTX nr result

ID: Cinnamomum23_contig00046186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00046186
         (271 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010255177.1| PREDICTED: pentatricopeptide repeat-containi...   103   6e-20
ref|XP_010671552.1| PREDICTED: pentatricopeptide repeat-containi...    92   1e-16
ref|XP_008777992.1| PREDICTED: putative pentatricopeptide repeat...    91   3e-16
ref|XP_006852897.2| PREDICTED: putative pentatricopeptide repeat...    87   3e-15
ref|XP_010909359.1| PREDICTED: pentatricopeptide repeat-containi...    86   7e-15
ref|XP_009409010.1| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
ref|XP_010664915.1| PREDICTED: putative pentatricopeptide repeat...    74   5e-11

>ref|XP_010255177.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Nelumbo nucifera]
          Length = 564

 Score =  103 bits (256), Expect = 6e-20
 Identities = 53/91 (58%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
 Frame = -2

Query: 267 DTATSVLVIEGLCRLKKLNRAKAVLLDLKRKGKVPDFFLYSLVFQCMVRDGRISDVELVW 88
           D+ATSVLVI+GL RL+ L RAKA+L +L+  GKV D+FLYSLV  C+V  GRI D +  W
Sbjct: 94  DSATSVLVIDGLSRLRMLGRAKALLKNLRSNGKVSDYFLYSLVIHCLVNVGRIEDADSFW 153

Query: 87  NEICGSE--SSVRICASDFVIYISKLGDVLE 1
           NE+CGS+  S  RI +S+FVIY+ K G  LE
Sbjct: 154 NEVCGSDLSSDRRIDSSEFVIYLCKFGRDLE 184


>ref|XP_010671552.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Beta vulgaris subsp. vulgaris]
           gi|870869828|gb|KMT20573.1| hypothetical protein
           BVRB_1g005550 [Beta vulgaris subsp. vulgaris]
          Length = 551

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 45/86 (52%), Positives = 59/86 (68%)
 Frame = -2

Query: 267 DTATSVLVIEGLCRLKKLNRAKAVLLDLKRKGKVPDFFLYSLVFQCMVRDGRISDVELVW 88
           D+ TS+ + EGLC+LKKLNRAK V L LK   KV  +F +SLVF C+V+DG + DVE+ W
Sbjct: 87  DSVTSIAIFEGLCKLKKLNRAKNVFLHLKDNLKVYPYFAFSLVFDCLVKDGNLDDVEVQW 146

Query: 87  NEICGSESSVRICASDFVIYISKLGD 10
           N+I    +   I  SD+VIY+ K GD
Sbjct: 147 NDI---SNGYEINLSDYVIYVCKCGD 169


>ref|XP_008777992.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial [Phoenix dactylifera]
          Length = 541

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 47/84 (55%), Positives = 59/84 (70%)
 Frame = -2

Query: 270 LDTATSVLVIEGLCRLKKLNRAKAVLLDLKRKGKVPDFFLYSLVFQCMVRDGRISDVELV 91
           LD+ TSVLV+ GL R KKL RAKAVL  LK +G +P+ FLYSLV QC+V +  I DVE V
Sbjct: 63  LDSTTSVLVLRGLSRCKKLTRAKAVLSGLKERGTIPEPFLYSLVLQCLVPESPIRDVESV 122

Query: 90  WNEICGSESSVRICASDFVIYISK 19
           W EI    S+  + ASDFV+Y+ +
Sbjct: 123 WREIGSGPSNRCMDASDFVLYLCR 146


>ref|XP_006852897.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial [Amborella trichopoda]
          Length = 514

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 46/89 (51%), Positives = 57/89 (64%)
 Frame = -2

Query: 267 DTATSVLVIEGLCRLKKLNRAKAVLLDLKRKGKVPDFFLYSLVFQCMVRDGRISDVELVW 88
           D+ATSVLVI  LC + +L RAK VL  L R  K+  FFLYS+V  C+V+DGRI DVE  +
Sbjct: 35  DSATSVLVIHRLCEINQLVRAKKVLSQLTRNPKISGFFLYSIVIHCIVKDGRIKDVECTF 94

Query: 87  NEICGSESSVRICASDFVIYISKLGDVLE 1
            EI G+ S   I  S F+ Y+ KLG   E
Sbjct: 95  EEIIGNGSLANINVSTFMNYLCKLGKARE 123


>ref|XP_010909359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63400-like [Elaeis guineensis]
          Length = 539

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 44/87 (50%), Positives = 57/87 (65%)
 Frame = -2

Query: 270 LDTATSVLVIEGLCRLKKLNRAKAVLLDLKRKGKVPDFFLYSLVFQCMVRDGRISDVELV 91
           LD+ TSVLV+ GL   KKL RAK VL  LK +G +P+ FLYSLV QC+V +  I DVE V
Sbjct: 63  LDSTTSVLVLRGLSHCKKLTRAKTVLSGLKERGTIPEPFLYSLVLQCLVPESPIRDVESV 122

Query: 90  WNEICGSESSVRICASDFVIYISKLGD 10
           W +I    S   + A DFV+Y+ + G+
Sbjct: 123 WRDIGSGPSDRCMDALDFVVYLCRRGE 149


>ref|XP_009409010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62720-like [Musa acuminata subsp. malaccensis]
          Length = 580

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 44/80 (55%), Positives = 54/80 (67%)
 Frame = -2

Query: 270 LDTATSVLVIEGLCRLKKLNRAKAVLLDLKRKGKVPDFFLYSLVFQCMVRDGRISDVELV 91
           LD+  SVL+I  L R KKL RAK+VL  LK++G VPD FLYSLV QC++ +  I DVE V
Sbjct: 97  LDSTASVLLIRALSRRKKLTRAKSVLSGLKQRGIVPDLFLYSLVLQCLLPESPIRDVESV 156

Query: 90  WNEICGSESSVRICASDFVI 31
           W++I G        ASDFVI
Sbjct: 157 WHDIRGGGPDGISGASDFVI 176


>ref|XP_010664915.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial [Vitis vinifera]
          Length = 536

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 39/87 (44%), Positives = 55/87 (63%)
 Frame = -2

Query: 270 LDTATSVLVIEGLCRLKKLNRAKAVLLDLKRKGKVPDFFLYSLVFQCMVRDGRISDVELV 91
           LD ATSVLVI  L +L KL RAK+++ +LK +  +  +FLYS+V   +V+ G I +VE  
Sbjct: 70  LDAATSVLVIHALSQLNKLQRAKSLIFNLKSQANLSHYFLYSVVIDSVVKHGTIDEVEAF 129

Query: 90  WNEICGSESSVRICASDFVIYISKLGD 10
           W +I    +   I  SD+VIY+ K GD
Sbjct: 130 WADIFRPPT---IDVSDYVIYVCKFGD 153


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