BLASTX nr result

ID: Cinnamomum23_contig00045866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00045866
         (407 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010245717.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_010245708.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07

>ref|XP_010245717.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71490
           isoform X2 [Nelumbo nucifera]
          Length = 690

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
 Frame = -2

Query: 325 WMSKSSSHLQSRDLFLLYRCIPRSWRKGLLTKSSQNNPEKS---LGEPIAHYYQAATLEE 155
           W S S SH+Q        R IP++WR  +       N + +   + E +     + +  E
Sbjct: 25  WRSLSQSHIQ--------RFIPKTWRLDI-----HKNHQMACYVINESVTD--SSGSCME 69

Query: 154 GYLADSRMTEEPLINSLWTSIKTFSSQGHLSNAFKTFSLLQHHISTTTHIL 2
           GY +     E  LI+SL +S+KTF+SQGHLS AFKTFSLLQ H +++  I+
Sbjct: 70  GYSS----REGSLIDSLQSSLKTFTSQGHLSRAFKTFSLLQLHAASSRDII 116


>ref|XP_010245708.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera]
           gi|720092348|ref|XP_010245709.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera]
           gi|720092351|ref|XP_010245710.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera]
           gi|720092354|ref|XP_010245712.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera]
           gi|720092357|ref|XP_010245713.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera]
           gi|720092360|ref|XP_010245714.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera]
           gi|720092363|ref|XP_010245715.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera]
           gi|720092366|ref|XP_010245716.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera]
          Length = 752

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
 Frame = -2

Query: 325 WMSKSSSHLQSRDLFLLYRCIPRSWRKGLLTKSSQNNPEKS---LGEPIAHYYQAATLEE 155
           W S S SH+Q        R IP++WR  +       N + +   + E +     + +  E
Sbjct: 25  WRSLSQSHIQ--------RFIPKTWRLDI-----HKNHQMACYVINESVTD--SSGSCME 69

Query: 154 GYLADSRMTEEPLINSLWTSIKTFSSQGHLSNAFKTFSLLQHHISTTTHIL 2
           GY +     E  LI+SL +S+KTF+SQGHLS AFKTFSLLQ H +++  I+
Sbjct: 70  GYSS----REGSLIDSLQSSLKTFTSQGHLSRAFKTFSLLQLHAASSRDII 116


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