BLASTX nr result
ID: Cinnamomum23_contig00045809
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00045809
(349 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group... 59 6e-08
gb|ABA94321.1| retrotransposon protein, putative, unclassified [... 59 6e-08
emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa Japonica Group] 59 6e-08
gb|ABA93730.1| retrotransposon protein, putative, unclassified [... 58 2e-07
gb|ABG22578.1| retrotransposon protein, putative, unclassified [... 57 2e-07
gb|ABA95797.1| retrotransposon protein, putative, unclassified [... 56 5e-07
gb|AAS79742.1| hypothetical protein [Oryza sativa Japonica Group] 57 2e-06
gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Jap... 53 4e-06
gb|AAP54332.2| retrotransposon protein, putative, unclassified [... 53 4e-06
emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group] 53 5e-06
gb|ABA95230.1| retrotransposon protein, putative, unclassified [... 53 5e-06
emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi... 53 5e-06
ref|XP_010112166.1| DNA polymerase theta [Morus notabilis] gi|58... 56 8e-06
>gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711651|gb|ABF99446.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1393
Score = 59.3 bits (142), Expect(2) = 6e-08
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +2
Query: 56 PDISYAVTVVSQRMYALRTGHSSVVHCILRNMKGYPGQGIFYACQDHSSLEMGY 217
PDISYAV+VVS+ M+ RTGH VVH ILR +KG PG+G+++ H ++E GY
Sbjct: 1186 PDISYAVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFRKNGHLNVE-GY 1238
Score = 23.9 bits (50), Expect(2) = 6e-08
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 18 RRLVGRLIYLYH 53
+RLVGRLIYL H
Sbjct: 1172 QRLVGRLIYLCH 1183
>gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1133
Score = 59.3 bits (142), Expect(2) = 6e-08
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +2
Query: 56 PDISYAVTVVSQRMYALRTGHSSVVHCILRNMKGYPGQGIFYACQDHSSLEMGY 217
PDISYAV+VVS+ M+ RTGH VVH ILR +KG PG+G+++ H ++E GY
Sbjct: 1045 PDISYAVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFRKNGHLNVE-GY 1097
Score = 23.9 bits (50), Expect(2) = 6e-08
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 18 RRLVGRLIYLYH 53
+RLVGRLIYL H
Sbjct: 1031 QRLVGRLIYLCH 1042
>emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa Japonica Group]
Length = 343
Score = 59.3 bits (142), Expect(2) = 6e-08
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +2
Query: 56 PDISYAVTVVSQRMYALRTGHSSVVHCILRNMKGYPGQGIFYACQDHSSLEMGY 217
PDISYAV+VVS+ M+ RTGH VVH ILR +KG PG+G+++ H ++E GY
Sbjct: 136 PDISYAVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFMKNGHLNVE-GY 188
Score = 23.9 bits (50), Expect(2) = 6e-08
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 18 RRLVGRLIYLYH 53
+RLVGRLIYL H
Sbjct: 122 QRLVGRLIYLCH 133
>gb|ABA93730.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 656
Score = 57.8 bits (138), Expect(2) = 2e-07
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +2
Query: 56 PDISYAVTVVSQRMYALRTGHSSVVHCILRNMKGYPGQGIFYACQDHSSLEMGY 217
PDISY V+VVS+ M+ RTGH VVH ILR +KG PG+G+++ H ++E GY
Sbjct: 449 PDISYVVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFRKNGHLNVE-GY 501
Score = 23.9 bits (50), Expect(2) = 2e-07
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 18 RRLVGRLIYLYH 53
+RLVGRLIYL H
Sbjct: 435 QRLVGRLIYLCH 446
>gb|ABG22578.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 836
Score = 57.4 bits (137), Expect(2) = 2e-07
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +2
Query: 56 PDISYAVTVVSQRMYALRTGHSSVVHCILRNMKGYPGQGIFYACQDHSSLEMGY 217
PDISYAV+VVS M+ RT H VVH ILR +KG PG+G+++ H ++E GY
Sbjct: 640 PDISYAVSVVSSYMHDPRTSHLDVVHMILRYLKGTPGKGLWFRKNGHLNVE-GY 692
Score = 23.9 bits (50), Expect(2) = 2e-07
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 18 RRLVGRLIYLYH 53
+RLVGRLIYL H
Sbjct: 626 QRLVGRLIYLCH 637
>gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1588
Score = 56.2 bits (134), Expect(2) = 5e-07
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +2
Query: 56 PDISYAVTVVSQRMYALRTGHSSVVHCILRNMKGYPGQGIFYACQDHSSLEMGY 217
PDISYAV+VVS+ M+ RT H VVH ILR +KG PG+G+++ H +E GY
Sbjct: 1381 PDISYAVSVVSRYMHDPRTTHLEVVHRILRYLKGTPGKGLWFRKNQHLDVE-GY 1433
Score = 23.9 bits (50), Expect(2) = 5e-07
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 18 RRLVGRLIYLYH 53
+RLVGRLIYL H
Sbjct: 1367 QRLVGRLIYLCH 1378
>gb|AAS79742.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 458
Score = 57.0 bits (136), Expect(2) = 2e-06
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = +2
Query: 59 DISYAVTVVSQRMYALRTGHSSVVHCILRNMKGYPGQGIFYACQDHSSLEMGY 217
DISYAV+VVS+ M+ RTGH VVH ILR +KG PG+G+++ H ++E GY
Sbjct: 226 DISYAVSVVSRYMHDPRTGHLDVVHRILRYLKGTPGKGLWFRKNGHLNME-GY 277
Score = 20.8 bits (42), Expect(2) = 2e-06
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 18 RRLVGRLIYLYH 53
+RLV RLIYL H
Sbjct: 211 QRLVRRLIYLCH 222
>gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Japonica Group]
Length = 894
Score = 53.1 bits (126), Expect(2) = 4e-06
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +2
Query: 56 PDISYAVTVVSQRMYALRTGHSSVVHCILRNMKGYPGQGIFYACQDHSSLEMGY 217
PDI+YAV+VVS+ M+ R+GH VV+ ILR +K PG+GI++ H +E GY
Sbjct: 687 PDITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGKGIWFKKNGHLDME-GY 739
Score = 23.9 bits (50), Expect(2) = 4e-06
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 18 RRLVGRLIYLYH 53
+RLVGRLIYL H
Sbjct: 673 QRLVGRLIYLCH 684
>gb|AAP54332.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 822
Score = 53.1 bits (126), Expect(2) = 4e-06
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +2
Query: 56 PDISYAVTVVSQRMYALRTGHSSVVHCILRNMKGYPGQGIFYACQDHSSLEMGY 217
PDI+YAV+VVS+ M+ R+GH VV+ ILR +K PG+GI++ H +E GY
Sbjct: 615 PDITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGKGIWFKKNGHLDME-GY 667
Score = 23.9 bits (50), Expect(2) = 4e-06
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 18 RRLVGRLIYLYH 53
+RLVGRLIYL H
Sbjct: 601 QRLVGRLIYLCH 612
>emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]
Length = 1015
Score = 52.8 bits (125), Expect(2) = 5e-06
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +2
Query: 56 PDISYAVTVVSQRMYALRTGHSSVVHCILRNMKGYPGQGIFYACQDHSSLEMGY 217
PDI+YAV+VVS+ M+ R+GH V+ ILR +KG PG+G+++ H +E GY
Sbjct: 790 PDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKNGHLGVE-GY 842
Score = 23.9 bits (50), Expect(2) = 5e-06
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 18 RRLVGRLIYLYH 53
+RLVGRLIYL H
Sbjct: 776 QRLVGRLIYLCH 787
>gb|ABA95230.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 936
Score = 52.8 bits (125), Expect(2) = 5e-06
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +2
Query: 56 PDISYAVTVVSQRMYALRTGHSSVVHCILRNMKGYPGQGIFYACQDHSSLEMGY 217
PDI+YAV+VVS+ M+ R+GH VV+ ILR +K PG+GI++ H +E GY
Sbjct: 729 PDITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGKGIWFKKNGHLDVE-GY 781
Score = 23.9 bits (50), Expect(2) = 5e-06
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 18 RRLVGRLIYLYH 53
+RLVGRLIYL H
Sbjct: 715 QRLVGRLIYLCH 726
>emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group]
Length = 806
Score = 52.8 bits (125), Expect(2) = 5e-06
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +2
Query: 56 PDISYAVTVVSQRMYALRTGHSSVVHCILRNMKGYPGQGIFYACQDHSSLEMGY 217
PDI+YAV+VVS+ M+ R+GH V+ ILR +KG PG+G+++ H +E GY
Sbjct: 599 PDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKNGHLGVE-GY 651
Score = 23.9 bits (50), Expect(2) = 5e-06
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 18 RRLVGRLIYLYH 53
+RLVGRLIYL H
Sbjct: 585 QRLVGRLIYLCH 596
>ref|XP_010112166.1| DNA polymerase theta [Morus notabilis] gi|587946452|gb|EXC32791.1|
DNA polymerase theta [Morus notabilis]
Length = 1941
Score = 56.2 bits (134), Expect = 8e-06
Identities = 26/63 (41%), Positives = 45/63 (71%)
Frame = +2
Query: 23 VGWQANLSISWPDISYAVTVVSQRMYALRTGHSSVVHCILRNMKGYPGQGIFYACQDHSS 202
VG LS + PDI++A++VVSQ+M++LR GH ++ ILR +K PG+G+F+ +++
Sbjct: 264 VGKLIYLSHTRPDIAFAISVVSQQMHSLRQGHFEAIYRILRYLKKTPGRGLFFGKEENRR 323
Query: 203 LEM 211
+E+
Sbjct: 324 VEI 326