BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00044876
         (668 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...    55   3e-07

>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 882

 Score = 54.7 bits (130), Expect(2) = 3e-07
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = -3

Query: 147 RPDRLCTAKCWETKQQEQAKVDVAEMHMLQGMFGVTRKDRIRNENIR 7
           RP  L  A+CW TK++   ++DVAEM ML+ M G TRKDR+RN++IR
Sbjct: 382 RPAMLYGAECWPTKRRHVQQLDVAEMCMLRCMCGHTRKDRVRNDDIR 428



 Score = 26.9 bits (58), Expect(2) = 3e-07
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = -1

Query: 212 WYLGATIEQNGGFELDIVNR 153
           WYLG+ ++++GG + D+ +R
Sbjct: 329 WYLGSLLQEDGGIDEDVNHR 348