BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00044512
         (346 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU94451.1| PsbD, partial (chloroplast) [Irvingia malayana]         54   2e-12
ref|NP_114244.1| photosystem II protein D2 (chloroplast) [Tritic...    49   2e-10
gb|AGQ03789.1| photosystem II protein D2 (chloroplast) [Aspleniu...    47   2e-10
gb|AKL78970.1| photosystem II core 34 kDa protein (chloroplast) ...    50   2e-10
ref|YP_007516997.2| photosystem II core 34 kDa protein (chloropl...    50   3e-10
ref|YP_009106666.1| D2 reaction center protein of photosystem II...    49   3e-10
ref|YP_009105659.1| D2 reaction center protein of photosystem II...    48   8e-10
ref|WP_028824840.1| photosystem II D2 protein [Proteobacteria ba...    47   1e-09
gb|AFR24822.1| photosystem II D2 protein [uncultured Pelagomonas]      47   1e-09
ref|YP_001019065.1| D2 reaction center protein of photosystem II...    48   1e-09
ref|YP_005090114.1| psbD gene product (chloroplast) [Fucus vesic...    46   1e-09
ref|XP_010088420.1| Photosystem II D2 protein [Morus notabilis] ...    44   1e-09
ref|WP_008183309.1| photosystem II, DII subunit [Moorea producen...    47   2e-09
ref|WP_008177879.1| photosynthetic reaction centre protein, part...    47   2e-09
ref|YP_005089788.1| psbD gene product (chloroplast) [Dunaliella ...    45   2e-09
gb|AEX32547.1| photosystem II protein D2 [Dunaliella tertiolecta]      45   2e-09
gb|AAY84725.1| photosystem II D2 protein [Dunaliella salina]           45   2e-09
ref|NP_045801.1| photosystem II protein D2 [Chlorella vulgaris] ...    47   3e-09
ref|YP_009106629.1| D2 reaction center protein of photosystem II...    46   3e-09
ref|YP_778560.1| photosystem II D2 protein [Bigelowiella natans]...    48   4e-09

>gb|AFU94451.1| PsbD, partial (chloroplast) [Irvingia malayana]
          Length = 348

 Score = 53.9 bits (128), Expect(3) = 2e-12
 Identities = 26/42 (61%), Positives = 29/42 (69%)
 Frame = +3

Query: 48  NDIFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFTCKT 173
           ND+FDI DD L  +  VFVG SG+LLF CAYF   GWFT  T
Sbjct: 13  NDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAXGGWFTGTT 54



 Score = 39.3 bits (90), Expect(3) = 2e-12
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = +1

Query: 184 VTSWYTDGLGNSYTEHCNFSTAPV 255
           VTSWYT GL +SY E CNF TA V
Sbjct: 56  VTSWYTHGLASSYLEGCNFLTAAV 79



 Score = 24.6 bits (52), Expect(3) = 2e-12
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           LAHSLLL  GPEAQ
Sbjct: 86  LAHSLLLLWGPEAQ 99


>ref|NP_114244.1| photosystem II protein D2 (chloroplast) [Triticum aestivum]
           gi|17380260|sp|Q36814.2|PSBD_WHEAT RecName:
           Full=Photosystem II D2 protein; Short=PSII D2 protein;
           AltName: Full=Photosystem Q(A) protein
           gi|13928190|dbj|BAB47019.1| PSII D2 protein
           (chloroplast) [Triticum aestivum]
          Length = 353

 Score = 48.5 bits (114), Expect(3) = 2e-10
 Identities = 25/42 (59%), Positives = 28/42 (66%)
 Frame = +3

Query: 48  NDIFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFTCKT 173
           ND+FD  DD L  +  VFVG SG+LLF CAYF L G FT  T
Sbjct: 13  NDLFDTMDDWLRRDRFVFVGWSGLLLFPCAYFALGGVFTGTT 54



 Score = 38.1 bits (87), Expect(3) = 2e-10
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +1

Query: 184 VTSWYTDGLGNSYTEHCNFSTAPV 255
           VTSWYT G+ +SY E CNF TA V
Sbjct: 56  VTSWYTHGVASSYLEGCNFLTAAV 79



 Score = 24.6 bits (52), Expect(3) = 2e-10
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           LAHSLLL  GPEAQ
Sbjct: 86  LAHSLLLLWGPEAQ 99


>gb|AGQ03789.1| photosystem II protein D2 (chloroplast) [Asplenium australasicum]
          Length = 353

 Score = 47.0 bits (110), Expect(3) = 2e-10
 Identities = 24/47 (51%), Positives = 30/47 (63%)
 Frame = +3

Query: 33  TSQKINDIFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFTCKT 173
           +S++  D+FD  DD L  +  VFVG SG+LLF  AY  L GWFT  T
Sbjct: 8   SSKESKDLFDSMDDWLRRDRFVFVGWSGLLLFPTAYLALGGWFTGTT 54



 Score = 39.3 bits (90), Expect(3) = 2e-10
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = +1

Query: 184 VTSWYTDGLGNSYTEHCNFSTAPV 255
           VTSWYT GL +SY E CNF TA V
Sbjct: 56  VTSWYTHGLASSYLEGCNFLTAAV 79



 Score = 24.6 bits (52), Expect(3) = 2e-10
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           LAHSLLL  GPEAQ
Sbjct: 86  LAHSLLLLWGPEAQ 99


>gb|AKL78970.1| photosystem II core 34 kDa protein (chloroplast) [Euglena viridis]
          Length = 352

 Score = 49.7 bits (117), Expect(3) = 2e-10
 Identities = 26/51 (50%), Positives = 31/51 (60%)
 Frame = +3

Query: 12  MIYLFISTSQKINDIFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFT 164
           M +  + T +K    FDI DD L  +  VFVG SG+LLF CAYF L GW T
Sbjct: 1   MTFAGLKTEEK-RGFFDIADDWLKRDRFVFVGWSGLLLFPCAYFALGGWLT 50



 Score = 37.4 bits (85), Expect(3) = 2e-10
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 148 YEVGSHVKPVIVVTSWYTDGLGNSYTEHCNFSTAPV 255
           + +G  +  +  VTSWYT GL +S+ E CN  TA V
Sbjct: 43  FALGGWLTGITFVTSWYTHGLASSFLEGCNVLTASV 78



 Score = 23.9 bits (50), Expect(3) = 2e-10
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           +AHSLLL  GPEAQ
Sbjct: 85  MAHSLLLLWGPEAQ 98


>ref|YP_007516997.2| photosystem II core 34 kDa protein (chloroplast) [Euglena viridis]
           gi|485110376|gb|AEY70770.2| photosystem II core 34 kDa
           protein (chloroplast) [Euglena viridis]
          Length = 352

 Score = 49.7 bits (117), Expect(3) = 3e-10
 Identities = 26/51 (50%), Positives = 31/51 (60%)
 Frame = +3

Query: 12  MIYLFISTSQKINDIFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFT 164
           M +  + T +K    FDI DD L  +  VFVG SG+LLF CAYF L GW T
Sbjct: 1   MTFAGLKTEEK-RGFFDIADDWLKRDRFVFVGWSGLLLFPCAYFALGGWLT 50



 Score = 37.0 bits (84), Expect(3) = 3e-10
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 148 YEVGSHVKPVIVVTSWYTDGLGNSYTEHCNFSTAPV 255
           + +G  +  +  VTSWYT GL  S+ E CN  TA V
Sbjct: 43  FALGGWLTGITFVTSWYTHGLATSFLEGCNVLTASV 78



 Score = 23.9 bits (50), Expect(3) = 3e-10
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           +AHSLLL  GPEAQ
Sbjct: 85  MAHSLLLLWGPEAQ 98


>ref|YP_009106666.1| D2 reaction center protein of photosystem II (chloroplast)
           [Pseudochloris wilhelmii] gi|698350090|gb|AIT95505.1| D2
           reaction center protein of photosystem II (chloroplast)
           [Pseudochloris wilhelmii]
          Length = 352

 Score = 48.5 bits (114), Expect(3) = 3e-10
 Identities = 25/46 (54%), Positives = 29/46 (63%)
 Frame = +3

Query: 27  ISTSQKINDIFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFT 164
           I  +Q+    FDI DD L  +  VFVG SG+LLF CAYF L GW T
Sbjct: 5   IGKTQQRPTWFDIVDDWLRRDRFVFVGWSGLLLFPCAYFALGGWLT 50



 Score = 39.7 bits (91), Expect(3) = 3e-10
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +1

Query: 148 YEVGSHVKPVIVVTSWYTDGLGNSYTEHCNFSTAPV 255
           + +G  +  +  VTSWYT GL  S+ E CNF TA V
Sbjct: 43  FALGGWLTGITFVTSWYTHGLATSFLEGCNFLTAAV 78



 Score = 22.3 bits (46), Expect(3) = 3e-10
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           + HSLLL  GPEAQ
Sbjct: 85  MGHSLLLLWGPEAQ 98


>ref|YP_009105659.1| D2 reaction center protein of photosystem II (chloroplast)
           [Xylochloris irregularis] gi|698348810|gb|AIT94316.1| D2
           reaction center protein of photosystem II (chloroplast)
           [Xylochloris irregularis]
          Length = 360

 Score = 48.1 bits (113), Expect(3) = 8e-10
 Identities = 25/49 (51%), Positives = 29/49 (59%)
 Frame = +3

Query: 27  ISTSQKINDIFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFTCKT 173
           I   Q+   +FD  DD L  +  VFVG SG+LLF CAY  L GWFT  T
Sbjct: 13  IGKPQEERTLFDDVDDWLRRDRFVFVGWSGLLLFPCAYLALGGWFTGTT 61



 Score = 39.3 bits (90), Expect(3) = 8e-10
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = +1

Query: 184 VTSWYTDGLGNSYTEHCNFSTAPV 255
           VTSWYT GL +SY E CNF TA V
Sbjct: 63  VTSWYTHGLASSYLEGCNFLTAAV 86



 Score = 21.6 bits (44), Expect(3) = 8e-10
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           L HSLL   GPEAQ
Sbjct: 93  LGHSLLFVWGPEAQ 106


>ref|WP_028824840.1| photosystem II D2 protein [Proteobacteria bacterium JGI
           0000113-P07]
          Length = 351

 Score = 47.4 bits (111), Expect(3) = 1e-09
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 54  IFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFTCKT 173
           IFD+ DD L  +  VFVG SGIL F CAY  + GWFT  T
Sbjct: 13  IFDLADDWLKRDRFVFVGWSGILCFPCAYLAIGGWFTGTT 52



 Score = 39.7 bits (91), Expect(3) = 1e-09
 Identities = 18/34 (52%), Positives = 20/34 (58%)
 Frame = +1

Query: 154 VGSHVKPVIVVTSWYTDGLGNSYTEHCNFSTAPV 255
           +G        VTSWYT GL +SY E CNF TA V
Sbjct: 44  IGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAV 77



 Score = 21.6 bits (44), Expect(3) = 1e-09
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           + HSL+L  GPEAQ
Sbjct: 84  MGHSLILLWGPEAQ 97


>gb|AFR24822.1| photosystem II D2 protein [uncultured Pelagomonas]
          Length = 351

 Score = 47.0 bits (110), Expect(3) = 1e-09
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 54  IFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFTCKT 173
           IFD+ DD L  +  VFVG SGIL F CAY  + GWFT  T
Sbjct: 13  IFDLADDWLKRDRFVFVGWSGILCFPCAYLAVGGWFTGTT 52



 Score = 40.0 bits (92), Expect(3) = 1e-09
 Identities = 19/34 (55%), Positives = 20/34 (58%)
 Frame = +1

Query: 154 VGSHVKPVIVVTSWYTDGLGNSYTEHCNFSTAPV 255
           VG        VTSWYT GL +SY E CNF TA V
Sbjct: 44  VGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAV 77



 Score = 21.6 bits (44), Expect(3) = 1e-09
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           + HSL+L  GPEAQ
Sbjct: 84  MGHSLILLWGPEAQ 97


>ref|YP_001019065.1| D2 reaction center protein of photosystem II [Chlorokybus
           atmophyticus] gi|221222761|sp|Q19VC7.2|PSBD_CHLAT
           RecName: Full=Photosystem II D2 protein; Short=PSII D2
           protein; AltName: Full=Photosystem Q(A) protein
           (chloroplast) [Chlorokybus atmophyticus]
           gi|124012195|gb|ABD62214.2| D2 reaction center protein
           of photosystem II [Chlorokybus atmophyticus]
          Length = 354

 Score = 48.1 bits (113), Expect(3) = 1e-09
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = +3

Query: 54  IFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFTCKT 173
           +FD+ DD L  +  VFVG SG+LLF CAY  L GWFT  T
Sbjct: 16  LFDLCDDWLKRDRFVFVGWSGLLLFPCAYLALGGWFTGTT 55



 Score = 37.7 bits (86), Expect(3) = 1e-09
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +1

Query: 184 VTSWYTDGLGNSYTEHCNFSTAPV 255
           VTSWY+ GL +SY E CNF TA V
Sbjct: 57  VTSWYSHGLASSYLEGCNFLTAAV 80



 Score = 22.3 bits (46), Expect(3) = 1e-09
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           + HSLLL  GPEAQ
Sbjct: 87  MGHSLLLLWGPEAQ 100


>ref|YP_005090114.1| psbD gene product (chloroplast) [Fucus vesiculosus]
           gi|269991316|emb|CAX12500.1| photosystem II reaction
           center protein D2 [Fucus vesiculosus]
          Length = 351

 Score = 46.2 bits (108), Expect(3) = 1e-09
 Identities = 22/40 (55%), Positives = 26/40 (65%)
 Frame = +3

Query: 54  IFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFTCKT 173
           +FD+ DD L  +  VFVG SG+ LF CAY  L GWFT  T
Sbjct: 13  LFDLVDDWLKRDRFVFVGWSGLQLFPCAYLALGGWFTGTT 52



 Score = 41.2 bits (95), Expect(3) = 1e-09
 Identities = 18/24 (75%), Positives = 18/24 (75%)
 Frame = +1

Query: 184 VTSWYTDGLGNSYTEHCNFSTAPV 255
           VTSWYT GLG SY E CNF TA V
Sbjct: 54  VTSWYTHGLGTSYLEGCNFLTAAV 77



 Score = 20.8 bits (42), Expect(3) = 1e-09
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           + HSLLL  GPEA+
Sbjct: 84  MGHSLLLLWGPEAK 97


>ref|XP_010088420.1| Photosystem II D2 protein [Morus notabilis]
           gi|587949980|gb|EXC35994.1| Photosystem II D2 protein
           [Morus notabilis]
          Length = 303

 Score = 43.9 bits (102), Expect(3) = 1e-09
 Identities = 20/32 (62%), Positives = 23/32 (71%)
 Frame = +3

Query: 69  DD*LMMNSLVFVGRSGILLFLCAYFPL*GWFT 164
           DD L  +  +FVG SG+LLF CAYF L GWFT
Sbjct: 2   DDWLRRDRFIFVGWSGLLLFPCAYFALGGWFT 33



 Score = 39.7 bits (91), Expect(3) = 1e-09
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = +1

Query: 148 YEVGSHVKPVIVVTSWYTDGLGNSYTEHCNFSTAPV 255
           + +G      I VTSWYT GL +SY E CNF T  V
Sbjct: 26  FALGGWFTGTIFVTSWYTHGLASSYLEGCNFLTIAV 61



 Score = 24.6 bits (52), Expect(3) = 1e-09
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           LAHSLLL  GPEAQ
Sbjct: 68  LAHSLLLLWGPEAQ 81


>ref|WP_008183309.1| photosystem II, DII subunit [Moorea producens]
           gi|332353466|gb|EGJ32979.1| photosystem II, DII subunit
           [Moorea producens 3L]
          Length = 352

 Score = 46.6 bits (109), Expect(3) = 2e-09
 Identities = 24/39 (61%), Positives = 25/39 (64%)
 Frame = +3

Query: 57  FDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFTCKT 173
           FDI DD L  +  VFVG SGILLF CAY  L GW T  T
Sbjct: 15  FDILDDWLKRDRFVFVGWSGILLFPCAYMALGGWLTGTT 53



 Score = 38.1 bits (87), Expect(3) = 2e-09
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +1

Query: 154 VGSHVKPVIVVTSWYTDGLGNSYTEHCNFSTAPV 255
           +G  +     VTSWYT GL +SY E CNF T  V
Sbjct: 45  LGGWLTGTTFVTSWYTHGLASSYLEGCNFLTVAV 78



 Score = 23.1 bits (48), Expect(3) = 2e-09
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           L HSLLL  GPEAQ
Sbjct: 85  LGHSLLLLWGPEAQ 98


>ref|WP_008177879.1| photosynthetic reaction centre protein, partial [Moorea producens]
           gi|332356139|gb|EGJ35596.1| photosynthetic reaction
           centre protein, partial [Moorea producens 3L]
          Length = 177

 Score = 46.6 bits (109), Expect(3) = 2e-09
 Identities = 24/39 (61%), Positives = 25/39 (64%)
 Frame = +3

Query: 57  FDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFTCKT 173
           FDI DD L  +  VFVG SGILLF CAY  L GW T  T
Sbjct: 15  FDILDDWLKRDRFVFVGWSGILLFPCAYMALGGWLTGTT 53



 Score = 38.1 bits (87), Expect(3) = 2e-09
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +1

Query: 154 VGSHVKPVIVVTSWYTDGLGNSYTEHCNFSTAPV 255
           +G  +     VTSWYT GL +SY E CNF T  V
Sbjct: 45  LGGWLTGTTFVTSWYTHGLASSYLEGCNFLTVAV 78



 Score = 23.1 bits (48), Expect(3) = 2e-09
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           L HSLLL  GPEAQ
Sbjct: 85  LGHSLLLLWGPEAQ 98


>ref|YP_005089788.1| psbD gene product (chloroplast) [Dunaliella salina]
           gi|246880739|gb|ACS95051.1| photosystem II protein D2
           [Dunaliella salina]
          Length = 352

 Score = 44.7 bits (104), Expect(3) = 2e-09
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +3

Query: 27  ISTSQKINDIFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFT 164
           I T Q+    FD  DD L  +  VFVG SG+LL  CAYF + GW T
Sbjct: 5   IGTYQEKRTWFDDADDWLRQDRFVFVGWSGLLLLPCAYFAVGGWLT 50



 Score = 41.2 bits (95), Expect(3) = 2e-09
 Identities = 19/36 (52%), Positives = 22/36 (61%)
 Frame = +1

Query: 148 YEVGSHVKPVIVVTSWYTDGLGNSYTEHCNFSTAPV 255
           + VG  +     VTSWYT GL +SY E CNF TA V
Sbjct: 43  FAVGGWLTGCTFVTSWYTHGLASSYIEGCNFLTAAV 78



 Score = 21.6 bits (44), Expect(3) = 2e-09
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           L HSLL   GPEAQ
Sbjct: 85  LGHSLLFVWGPEAQ 98


>gb|AEX32547.1| photosystem II protein D2 [Dunaliella tertiolecta]
          Length = 352

 Score = 44.7 bits (104), Expect(3) = 2e-09
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +3

Query: 27  ISTSQKINDIFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFT 164
           I T Q+    FD  DD L  +  VFVG SG+LL  CAYF + GW T
Sbjct: 5   IGTYQEKRTWFDDADDWLRQDRFVFVGWSGLLLLPCAYFAVGGWLT 50



 Score = 41.2 bits (95), Expect(3) = 2e-09
 Identities = 19/36 (52%), Positives = 22/36 (61%)
 Frame = +1

Query: 148 YEVGSHVKPVIVVTSWYTDGLGNSYTEHCNFSTAPV 255
           + VG  +     VTSWYT GL +SY E CNF TA V
Sbjct: 43  FAVGGWLTGCTFVTSWYTHGLASSYIEGCNFLTAAV 78



 Score = 21.6 bits (44), Expect(3) = 2e-09
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           L HSLL   GPEAQ
Sbjct: 85  LGHSLLFVWGPEAQ 98


>gb|AAY84725.1| photosystem II D2 protein [Dunaliella salina]
          Length = 332

 Score = 44.7 bits (104), Expect(3) = 2e-09
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +3

Query: 27  ISTSQKINDIFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFT 164
           I T Q+    FD  DD L  +  VFVG SG+LL  CAYF + GW T
Sbjct: 5   IGTYQEKRTWFDDADDWLRQDRFVFVGWSGLLLLPCAYFAVGGWLT 50



 Score = 41.2 bits (95), Expect(3) = 2e-09
 Identities = 19/36 (52%), Positives = 22/36 (61%)
 Frame = +1

Query: 148 YEVGSHVKPVIVVTSWYTDGLGNSYTEHCNFSTAPV 255
           + VG  +     VTSWYT GL +SY E CNF TA V
Sbjct: 43  FAVGGWLTGCTFVTSWYTHGLASSYIEGCNFLTAAV 78



 Score = 21.6 bits (44), Expect(3) = 2e-09
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           L HSLL   GPEAQ
Sbjct: 85  LGHSLLFVWGPEAQ 98


>ref|NP_045801.1| photosystem II protein D2 [Chlorella vulgaris]
           gi|3024458|sp|P56319.1|PSBD_CHLVU RecName:
           Full=Photosystem II D2 protein; Short=PSII D2 protein;
           AltName: Full=Photosystem Q(A) protein (chloroplast)
           [Chlorella vulgaris] gi|2224392|dbj|BAA57876.1|
           photosystem II D2 protein [Chlorella vulgaris]
          Length = 352

 Score = 47.4 bits (111), Expect(3) = 3e-09
 Identities = 24/49 (48%), Positives = 30/49 (61%)
 Frame = +3

Query: 27  ISTSQKINDIFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFTCKT 173
           I  +Q+   +FD+ DD L  +  VFVG SG+LLF  AY  L GWFT  T
Sbjct: 5   IGKTQEKRGLFDVVDDWLRRDRFVFVGWSGLLLFPTAYLALGGWFTGTT 53



 Score = 38.9 bits (89), Expect(3) = 3e-09
 Identities = 17/24 (70%), Positives = 17/24 (70%)
 Frame = +1

Query: 184 VTSWYTDGLGNSYTEHCNFSTAPV 255
           VTSWYT GL  SY E CNF TA V
Sbjct: 55  VTSWYTHGLATSYLEGCNFLTAAV 78



 Score = 20.8 bits (42), Expect(3) = 3e-09
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           + HSLL   GPEAQ
Sbjct: 85  MGHSLLFLWGPEAQ 98


>ref|YP_009106629.1| D2 reaction center protein of photosystem II (chloroplast)
           [Dicloster acuatus] gi|698349994|gb|AIT95418.1| D2
           reaction center protein of photosystem II (chloroplast)
           [Dicloster acuatus]
          Length = 352

 Score = 46.2 bits (108), Expect(3) = 3e-09
 Identities = 24/49 (48%), Positives = 29/49 (59%)
 Frame = +3

Query: 27  ISTSQKINDIFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFTCKT 173
           I  +Q+    FDI DD L  +  VFVG SG+LL  CAY  + GWFT  T
Sbjct: 5   IGKTQEKRGWFDIVDDWLRRDRFVFVGWSGLLLLPCAYLAVGGWFTGTT 53



 Score = 40.0 bits (92), Expect(3) = 3e-09
 Identities = 19/34 (55%), Positives = 20/34 (58%)
 Frame = +1

Query: 154 VGSHVKPVIVVTSWYTDGLGNSYTEHCNFSTAPV 255
           VG        VTSWYT GL +SY E CNF TA V
Sbjct: 45  VGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAV 78



 Score = 20.8 bits (42), Expect(3) = 3e-09
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 263 LAHSLLL*SGPEAQ 304
           + HSLL   GPEAQ
Sbjct: 85  MGHSLLFLWGPEAQ 98


>ref|YP_778560.1| photosystem II D2 protein [Bigelowiella natans]
           gi|122227453|sp|Q06J67.1|PSBD_BIGNA RecName:
           Full=Photosystem II D2 protein; Short=PSII D2 protein;
           AltName: Full=Photosystem Q(A) protein (chloroplast)
           [Bigelowiella natans] gi|110810186|gb|ABG91392.1|
           photosystem II D2 protein [Bigelowiella natans]
          Length = 352

 Score = 47.8 bits (112), Expect(2) = 4e-09
 Identities = 23/49 (46%), Positives = 30/49 (61%)
 Frame = +3

Query: 27  ISTSQKINDIFDITDD*LMMNSLVFVGRSGILLFLCAYFPL*GWFTCKT 173
           I  +++   +FDI DD L  +  VF+G SG+LLF CAY  L GW T  T
Sbjct: 5   IGKAEEERGVFDIIDDWLRRDRFVFIGWSGLLLFPCAYLALGGWLTGTT 53



 Score = 39.7 bits (91), Expect(2) = 4e-09
 Identities = 18/34 (52%), Positives = 21/34 (61%)
 Frame = +1

Query: 154 VGSHVKPVIVVTSWYTDGLGNSYTEHCNFSTAPV 255
           +G  +     VTSWYT GL +SY E CNF TA V
Sbjct: 45  LGGWLTGTTFVTSWYTHGLASSYLEGCNFLTAAV 78