BLASTX nr result
ID: Cinnamomum23_contig00044406
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00044406
(307 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005649206.1| ribosomal protein 60S [Coccomyxa subellipsoi... 74 4e-11
gb|KIZ03827.1| 60S acidic ribosomal protein P1 [Monoraphidium ne... 72 2e-10
pir||A53221 acidic ribosomal protein P1 - hydromedusa (Polyorchi... 67 5e-09
ref|XP_001699629.1| acidic ribosomal protein P1 [Chlamydomonas r... 66 1e-08
ref|XP_006123583.1| PREDICTED: 60S acidic ribosomal protein P1-l... 65 2e-08
ref|XP_010048528.1| PREDICTED: 60S acidic ribosomal protein P1-l... 65 2e-08
ref|NP_197839.1| 60S acidic ribosomal family protein [Arabidopsi... 64 3e-08
ref|XP_010871472.1| PREDICTED: 60S acidic ribosomal protein P1 [... 64 4e-08
ref|XP_002318457.1| 60S acidic ribosomal protein P1 [Populus tri... 64 4e-08
gb|ACH71045.1| ribosomal protein, large, P1 like 2 [Salmo salar]... 64 4e-08
gb|ACH71044.1| ribosomal protein, large, P1 like 1 [Salmo salar]... 64 4e-08
ref|XP_006376670.1| hypothetical protein POPTR_0012s02860g [Popu... 64 4e-08
gb|ABK94525.1| unknown [Populus trichocarpa] gi|118485425|gb|ABK... 64 4e-08
gb|ABK92827.1| unknown [Populus trichocarpa] 64 4e-08
ref|XP_011043693.1| PREDICTED: 60S acidic ribosomal protein P1-l... 64 5e-08
ref|XP_005291104.1| PREDICTED: 60S acidic ribosomal protein P1 [... 64 5e-08
ref|XP_004421810.1| PREDICTED: 60S acidic ribosomal protein P1 i... 64 5e-08
ref|XP_004306618.1| PREDICTED: 60S acidic ribosomal protein P1-l... 64 5e-08
ref|XP_004365780.1| hypothetical protein CAOG_00909 [Capsaspora ... 64 5e-08
ref|XP_001757597.1| predicted protein [Physcomitrella patens] gi... 64 5e-08
>ref|XP_005649206.1| ribosomal protein 60S [Coccomyxa subellipsoidea C-169]
gi|384251184|gb|EIE24662.1| ribosomal protein 60S
[Coccomyxa subellipsoidea C-169]
Length = 113
Score = 73.9 bits (180), Expect = 4e-11
Identities = 38/62 (61%), Positives = 39/62 (62%)
Frame = +2
Query: 29 MSTSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIA 208
MSTSELACVYASLILH + AA V VEPYWP LFAKLF K IG LI
Sbjct: 1 MSTSELACVYASLILHDDGLDITGDNITTLIKAAGVTVEPYWPGLFAKLFEKRSIGDLIT 60
Query: 209 NV 214
NV
Sbjct: 61 NV 62
>gb|KIZ03827.1| 60S acidic ribosomal protein P1 [Monoraphidium neglectum]
Length = 106
Score = 71.6 bits (174), Expect = 2e-10
Identities = 35/62 (56%), Positives = 40/62 (64%)
Frame = +2
Query: 29 MSTSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIA 208
MSTSELAC YA+LILH + AA ++VEPYWP+LFAKLFA IG LI
Sbjct: 1 MSTSELACTYAALILHDDGLDITADAITSIVKAAGIEVEPYWPALFAKLFANKSIGDLIT 60
Query: 209 NV 214
NV
Sbjct: 61 NV 62
>pir||A53221 acidic ribosomal protein P1 - hydromedusa (Polyorchis penicillatus)
[Polyorchis penicillatus] gi|227678|prf||1709160A acidic
ribosomal protein A1 [Polyorchis penicillatus]
Length = 111
Score = 67.0 bits (162), Expect = 5e-09
Identities = 34/61 (55%), Positives = 37/61 (60%)
Frame = +2
Query: 32 STSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIAN 211
STSELACVY++LILH +SAANV VEPYWP LFAK IG LI N
Sbjct: 5 STSELACVYSALILHDDDVAITAEKMNKIISAANVNVEPYWPGLFAKALEGKNIGDLICN 64
Query: 212 V 214
V
Sbjct: 65 V 65
>ref|XP_001699629.1| acidic ribosomal protein P1 [Chlamydomonas reinhardtii]
gi|266947|sp|P29763.1|RLA1_CHLRE RecName: Full=60S
acidic ribosomal protein P1 gi|18211|emb|CAA47042.1|
ribosomal protein P1 [Chlamydomonas reinhardtii]
gi|158272734|gb|EDO98531.1| acidic ribosomal protein P1
[Chlamydomonas reinhardtii]
Length = 107
Score = 65.9 bits (159), Expect = 1e-08
Identities = 34/62 (54%), Positives = 38/62 (61%)
Frame = +2
Query: 29 MSTSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIA 208
MSTSELAC YA+LILH AA V+VE YWP+LFAKLFAK + LI
Sbjct: 1 MSTSELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLIT 60
Query: 209 NV 214
NV
Sbjct: 61 NV 62
>ref|XP_006123583.1| PREDICTED: 60S acidic ribosomal protein P1-like isoform X1
[Pelodiscus sinensis]
Length = 112
Score = 65.1 bits (157), Expect = 2e-08
Identities = 33/61 (54%), Positives = 37/61 (60%)
Frame = +2
Query: 32 STSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIAN 211
STSELAC+YA+LILH + AA V VEP+WP LFAK A IGSLI N
Sbjct: 3 STSELACIYAALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANIDIGSLICN 62
Query: 212 V 214
V
Sbjct: 63 V 63
>ref|XP_010048528.1| PREDICTED: 60S acidic ribosomal protein P1-like [Eucalyptus
grandis] gi|629124654|gb|KCW89079.1| hypothetical
protein EUGRSUZ_A01408 [Eucalyptus grandis]
Length = 111
Score = 64.7 bits (156), Expect = 2e-08
Identities = 33/62 (53%), Positives = 36/62 (58%)
Frame = +2
Query: 29 MSTSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIA 208
MS ELAC YA+LILH + AANV VE YWPSLFAKL K +G LI
Sbjct: 1 MSAGELACTYATLILHDDGIPITGEKIASLVKAANVSVESYWPSLFAKLAEKRNVGDLIM 60
Query: 209 NV 214
NV
Sbjct: 61 NV 62
>ref|NP_197839.1| 60S acidic ribosomal family protein [Arabidopsis thaliana]
gi|10177851|dbj|BAB11203.1| 60s acidic ribosomal protein
P1 [Arabidopsis thaliana] gi|67633816|gb|AAY78832.1|
putative 60S acidic ribosomal protein P1 [Arabidopsis
thaliana] gi|332005935|gb|AED93318.1| 60S acidic
ribosomal family protein [Arabidopsis thaliana]
Length = 111
Score = 64.3 bits (155), Expect = 3e-08
Identities = 34/62 (54%), Positives = 36/62 (58%)
Frame = +2
Query: 29 MSTSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIA 208
MSTSELAC YA+LILH + ANV VE YWPSLFAKL K I LI
Sbjct: 1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60
Query: 209 NV 214
NV
Sbjct: 61 NV 62
>ref|XP_010871472.1| PREDICTED: 60S acidic ribosomal protein P1 [Esox lucius]
Length = 112
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = +2
Query: 32 STSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIAN 211
S SELAC+Y++LILH + AANV +EP+WPSLF+K A IGSLI N
Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKLLALIKAANVTIEPFWPSLFSKALASVDIGSLICN 62
Query: 212 V 214
V
Sbjct: 63 V 63
>ref|XP_002318457.1| 60S acidic ribosomal protein P1 [Populus trichocarpa]
gi|222859130|gb|EEE96677.1| 60S acidic ribosomal protein
P1 [Populus trichocarpa]
Length = 113
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = +2
Query: 29 MSTSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIA 208
M+ SELAC+YA+LILH + +ANV VE YWPSLFAKL K +G LI
Sbjct: 1 MAGSELACIYATLILHDEDIAITSDKIATLVKSANVNVESYWPSLFAKLAEKRNVGDLIM 60
Query: 209 NV 214
N+
Sbjct: 61 NI 62
>gb|ACH71045.1| ribosomal protein, large, P1 like 2 [Salmo salar]
gi|209730680|gb|ACI66209.1| 60S acidic ribosomal protein
P1 [Salmo salar] gi|223646724|gb|ACN10120.1| 60S acidic
ribosomal protein P1 [Salmo salar]
gi|223672579|gb|ACN12471.1| 60S acidic ribosomal protein
P1 [Salmo salar]
Length = 111
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = +2
Query: 32 STSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIAN 211
S SELAC+Y++LILH + AANV +EP+WPSLF+K A IGSLI N
Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKLMALIKAANVTIEPFWPSLFSKALASVDIGSLICN 62
Query: 212 V 214
V
Sbjct: 63 V 63
>gb|ACH71044.1| ribosomal protein, large, P1 like 1 [Salmo salar]
gi|221219932|gb|ACM08627.1| 60S acidic ribosomal protein
P1 [Salmo salar] gi|221222050|gb|ACM09686.1| 60S acidic
ribosomal protein P1 [Salmo salar]
gi|642080499|emb|CDQ86057.1| unnamed protein product
[Oncorhynchus mykiss]
Length = 111
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = +2
Query: 32 STSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIAN 211
S SELAC+Y++LILH + AANV +EP+WPSLF+K A IGSLI N
Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKLMALIKAANVTIEPFWPSLFSKALASVDIGSLICN 62
Query: 212 V 214
V
Sbjct: 63 V 63
>ref|XP_006376670.1| hypothetical protein POPTR_0012s02860g [Populus trichocarpa]
gi|550326254|gb|ERP54467.1| hypothetical protein
POPTR_0012s02860g [Populus trichocarpa]
Length = 109
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = +2
Query: 29 MSTSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIA 208
M+ SELAC+YA+LILH + +ANV VE YWPSLFAKL K +G LI
Sbjct: 1 MAGSELACIYATLILHDEDIAITSDKIATLVKSANVNVESYWPSLFAKLAEKRNVGDLIM 60
Query: 209 NV 214
N+
Sbjct: 61 NI 62
>gb|ABK94525.1| unknown [Populus trichocarpa] gi|118485425|gb|ABK94569.1| unknown
[Populus trichocarpa]
Length = 109
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = +2
Query: 29 MSTSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIA 208
M+ SELAC+YA+LILH + +ANV VE YWPSLFAKL K +G LI
Sbjct: 1 MAGSELACIYATLILHDEDIAISSDKIATLVKSANVNVESYWPSLFAKLAEKRNVGDLIM 60
Query: 209 NV 214
N+
Sbjct: 61 NI 62
>gb|ABK92827.1| unknown [Populus trichocarpa]
Length = 110
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = +2
Query: 29 MSTSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIA 208
M+ SELAC+YA+LILH + +ANV VE YWPSLFAKL K +G LI
Sbjct: 1 MAGSELACIYATLILHDEDIAITSDKIATLVKSANVNVESYWPSLFAKLAEKRNVGDLIM 60
Query: 209 NV 214
N+
Sbjct: 61 NI 62
>ref|XP_011043693.1| PREDICTED: 60S acidic ribosomal protein P1-like [Populus
euphratica]
Length = 109
Score = 63.5 bits (153), Expect = 5e-08
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = +2
Query: 29 MSTSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIA 208
M+ SELAC+YA+LILH + +ANV VE YWPSLFAKL K +G LI
Sbjct: 1 MAGSELACIYATLILHDEDIAITSDKIATLVKSANVTVESYWPSLFAKLAEKRNVGDLIM 60
Query: 209 NV 214
N+
Sbjct: 61 NI 62
>ref|XP_005291104.1| PREDICTED: 60S acidic ribosomal protein P1 [Chrysemys picta bellii]
Length = 112
Score = 63.5 bits (153), Expect = 5e-08
Identities = 32/61 (52%), Positives = 37/61 (60%)
Frame = +2
Query: 32 STSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIAN 211
S+SELAC+YA+LILH + AA V VEP+WP LFAK A IGSLI N
Sbjct: 3 SSSELACIYAALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANIDIGSLICN 62
Query: 212 V 214
V
Sbjct: 63 V 63
>ref|XP_004421810.1| PREDICTED: 60S acidic ribosomal protein P1 isoform 1 [Ceratotherium
simum simum]
Length = 114
Score = 63.5 bits (153), Expect = 5e-08
Identities = 32/61 (52%), Positives = 36/61 (59%)
Frame = +2
Query: 32 STSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIAN 211
S SELAC+YA+LILH + AA V VEP+WP LFAK A IGSLI N
Sbjct: 3 SVSELACIYAALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICN 62
Query: 212 V 214
V
Sbjct: 63 V 63
>ref|XP_004306618.1| PREDICTED: 60S acidic ribosomal protein P1-like [Fragaria vesca
subsp. vesca]
Length = 111
Score = 63.5 bits (153), Expect = 5e-08
Identities = 33/62 (53%), Positives = 36/62 (58%)
Frame = +2
Query: 29 MSTSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIA 208
MS SE+AC YA+LILH + AANV VE YWP LFAKL K IG LI
Sbjct: 1 MSISEIACTYAALILHDDGIAITPEKIAALVKAANVSVESYWPGLFAKLAEKRDIGDLIL 60
Query: 209 NV 214
NV
Sbjct: 61 NV 62
>ref|XP_004365780.1| hypothetical protein CAOG_00909 [Capsaspora owczarzaki ATCC 30864]
gi|765548823|gb|KJE89444.1| hypothetical protein
CAOG_000909 [Capsaspora owczarzaki ATCC 30864]
Length = 109
Score = 63.5 bits (153), Expect = 5e-08
Identities = 33/62 (53%), Positives = 37/62 (59%)
Frame = +2
Query: 29 MSTSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIA 208
MS SELACVYA+LILH +SAA + VE YWP+LFAK IG LIA
Sbjct: 1 MSKSELACVYAALILHDDDVAVTADKISKLISAAKIDVEAYWPALFAKALEGRSIGDLIA 60
Query: 209 NV 214
NV
Sbjct: 61 NV 62
>ref|XP_001757597.1| predicted protein [Physcomitrella patens]
gi|162691291|gb|EDQ77654.1| predicted protein
[Physcomitrella patens]
Length = 109
Score = 63.5 bits (153), Expect = 5e-08
Identities = 33/62 (53%), Positives = 36/62 (58%)
Frame = +2
Query: 29 MSTSELACVYASLILHXXXXXXXXXXXXXXLSAANVKVEPYWPSLFAKLFAKNGIGSLIA 208
MS SELAC YASLILH + AANV+VE YWP LFAKL K + LI
Sbjct: 1 MSVSELACTYASLILHDDGIAITADKIAALVKAANVQVEGYWPGLFAKLCEKRSVDDLIT 60
Query: 209 NV 214
NV
Sbjct: 61 NV 62