BLASTX nr result
ID: Cinnamomum23_contig00043979
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00043979
(308 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008651726.1| PREDICTED: hypothetical protein isoform X1 [... 130 3e-28
ref|XP_008674202.1| PREDICTED: retrovirus-related Pol polyprotei... 130 3e-28
ref|XP_008674201.1| PREDICTED: uncharacterized protein LOC100279... 130 3e-28
ref|XP_008647645.1| PREDICTED: uncharacterized protein LOC100502... 130 3e-28
ref|XP_008654354.1| PREDICTED: uncharacterized protein LOC100193... 127 2e-27
ref|XP_008654353.1| PREDICTED: uncharacterized protein LOC100193... 127 2e-27
ref|XP_008654352.1| PREDICTED: uncharacterized protein LOC100193... 127 2e-27
ref|XP_008669041.1| PREDICTED: uncharacterized protein LOC103646... 127 2e-27
gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii] 127 2e-27
ref|XP_008441928.1| PREDICTED: uncharacterized protein LOC103485... 124 2e-26
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 122 7e-26
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ... 122 9e-26
ref|XP_009597668.1| PREDICTED: uncharacterized protein LOC104093... 121 2e-25
gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arab... 119 6e-25
ref|XP_010496878.1| PREDICTED: uncharacterized protein LOC104773... 119 8e-25
ref|XP_010495581.1| PREDICTED: uncharacterized protein LOC104772... 117 2e-24
ref|XP_010470454.1| PREDICTED: uncharacterized protein LOC104750... 117 2e-24
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ... 117 2e-24
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 117 3e-24
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 117 3e-24
>ref|XP_008651726.1| PREDICTED: hypothetical protein isoform X1 [Zea mays]
Length = 989
Score = 130 bits (328), Expect = 3e-28
Identities = 65/101 (64%), Positives = 76/101 (75%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+LTS+GTLAQLSCP QNGVAERKHRHI+ET R+L+ +S VP F GEAV TA+YLIN
Sbjct: 207 FLTSEGTLAQLSCPGAHAQNGVAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLIN 266
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLLHDNE 308
R PSS LSG +P E LF P +L+VFGCTC+VLL E
Sbjct: 267 RQPSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRE 307
>ref|XP_008674202.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Zea mays]
Length = 756
Score = 130 bits (328), Expect = 3e-28
Identities = 65/101 (64%), Positives = 76/101 (75%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+LTS+GTLAQLSCP QNGVAERKHRHI+ET R+L+ +S VP F GEAV TA+YLIN
Sbjct: 215 FLTSEGTLAQLSCPGAHAQNGVAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLIN 274
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLLHDNE 308
R PSS LSG +P E LF P +L+VFGCTC+VLL E
Sbjct: 275 RQPSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRE 315
>ref|XP_008674201.1| PREDICTED: uncharacterized protein LOC100279087 isoform X1 [Zea mays]
Length = 1376
Score = 130 bits (328), Expect = 3e-28
Identities = 65/101 (64%), Positives = 76/101 (75%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+LTS+GTLAQLSCP QNGVAERKHRHI+ET R+L+ +S VP F GEAV TA+YLIN
Sbjct: 882 FLTSEGTLAQLSCPGAHAQNGVAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLIN 941
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLLHDNE 308
R PSS LSG +P E LF P +L+VFGCTC+VLL E
Sbjct: 942 RQPSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRE 982
>ref|XP_008647645.1| PREDICTED: uncharacterized protein LOC100502300 isoform X2 [Zea
mays]
Length = 1180
Score = 130 bits (328), Expect = 3e-28
Identities = 65/101 (64%), Positives = 76/101 (75%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+LTS+GTLAQLSCP QNGVAERKHRHI+ET R+L+ +S VP F GEAV TA+YLIN
Sbjct: 398 FLTSEGTLAQLSCPGAHAQNGVAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLIN 457
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLLHDNE 308
R PSS LSG +P E LF P +L+VFGCTC+VLL E
Sbjct: 458 RQPSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRE 498
>ref|XP_008654354.1| PREDICTED: uncharacterized protein LOC100193261 isoform X3 [Zea
mays]
Length = 721
Score = 127 bits (320), Expect = 2e-27
Identities = 64/101 (63%), Positives = 75/101 (74%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+LTS+GTLAQLSC QNGVAERKHRHI+ET R+L+ +S VP F GEAV TA+YLIN
Sbjct: 433 FLTSEGTLAQLSCSGAHAQNGVAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLIN 492
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLLHDNE 308
R PSS LSG +P E LF P +L+VFGCTC+VLL E
Sbjct: 493 RQPSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRE 533
>ref|XP_008654353.1| PREDICTED: uncharacterized protein LOC100193261 isoform X2 [Zea
mays]
Length = 725
Score = 127 bits (320), Expect = 2e-27
Identities = 64/101 (63%), Positives = 75/101 (74%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+LTS+GTLAQLSC QNGVAERKHRHI+ET R+L+ +S VP F GEAV TA+YLIN
Sbjct: 437 FLTSEGTLAQLSCSGAHAQNGVAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLIN 496
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLLHDNE 308
R PSS LSG +P E LF P +L+VFGCTC+VLL E
Sbjct: 497 RQPSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRE 537
>ref|XP_008654352.1| PREDICTED: uncharacterized protein LOC100193261 isoform X1 [Zea
mays]
Length = 761
Score = 127 bits (320), Expect = 2e-27
Identities = 64/101 (63%), Positives = 75/101 (74%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+LTS+GTLAQLSC QNGVAERKHRHI+ET R+L+ +S VP F GEAV TA+YLIN
Sbjct: 473 FLTSEGTLAQLSCSGAHAQNGVAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLIN 532
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLLHDNE 308
R PSS LSG +P E LF P +L+VFGCTC+VLL E
Sbjct: 533 RQPSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRE 573
>ref|XP_008669041.1| PREDICTED: uncharacterized protein LOC103646095 [Zea mays]
Length = 704
Score = 127 bits (320), Expect = 2e-27
Identities = 64/101 (63%), Positives = 75/101 (74%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+LTS+GTLAQLSCP QNGVAE KHRHI+ET R+L+ +S VP F GEAV TA+YLIN
Sbjct: 504 FLTSEGTLAQLSCPGAHAQNGVAECKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLIN 563
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLLHDNE 308
R PSS LSG +P E LF P +L+VFGCTC+VLL E
Sbjct: 564 RQPSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRE 604
>gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]
Length = 732
Score = 127 bits (320), Expect = 2e-27
Identities = 64/95 (67%), Positives = 74/95 (77%)
Frame = +3
Query: 9 LTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLINR 188
L GTL Q SC TPQQNGVAERKHRHI+ET RSL+ ++ VP F GEAVLTA++ INR
Sbjct: 136 LAYDGTLHQSSCTDTPQQNGVAERKHRHIIETARSLLLSASVPSEFWGEAVLTAVHAINR 195
Query: 189 TPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVL 293
PSSV+SG SP+EKL++ PD S LKVFG TCFVL
Sbjct: 196 IPSSVISGLSPFEKLYASVPDYSSLKVFGSTCFVL 230
>ref|XP_008441928.1| PREDICTED: uncharacterized protein LOC103485923 [Cucumis melo]
Length = 644
Score = 124 bits (311), Expect = 2e-26
Identities = 60/97 (61%), Positives = 72/97 (74%)
Frame = +3
Query: 18 QGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLINRTPS 197
QGTL Q SCP T QQNG AERKHRHIL++VR+L+ ++ P F GEA LT++Y INR PS
Sbjct: 381 QGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPS 440
Query: 198 SVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLLHDNE 308
SVL SP+EKL+ P+ S LK FGC CFVLLH +E
Sbjct: 441 SVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHE 477
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 122 bits (307), Expect = 7e-26
Identities = 56/98 (57%), Positives = 73/98 (74%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+ +S+G L Q SC TPQQNGV ERKHRH+L R+L++ SH+P F G+A+LTA YLIN
Sbjct: 664 FYSSRGILHQTSCINTPQQNGVVERKHRHLLNVARALLFQSHLPKPFWGDAILTAAYLIN 723
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLLH 299
RTP+ +L G +P+EKLF P+ S+L+VFGC CFV H
Sbjct: 724 RTPTPLLQGKTPFEKLFHKSPNYSHLRVFGCRCFVSTH 761
>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group] gi|78708691|gb|ABB47666.1|
retrotransposon protein, putative, unclassified,
expressed [Oryza sativa Japonica Group]
Length = 1682
Score = 122 bits (306), Expect = 9e-26
Identities = 61/101 (60%), Positives = 70/101 (69%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+L SQGTL QLSCP QNGVAERKHRHI+ET R+L+ S VP F EA+ TA+YLIN
Sbjct: 463 FLVSQGTLPQLSCPGAHAQNGVAERKHRHIIETARTLLIASFVPAHFWAEAISTAVYLIN 522
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLLHDNE 308
PSS L G SP E LF P +L+VFGCTC+VLL E
Sbjct: 523 MQPSSSLQGRSPGEVLFGSPPRYDHLRVFGCTCYVLLAPRE 563
>ref|XP_009597668.1| PREDICTED: uncharacterized protein LOC104093605 [Nicotiana
tomentosiformis]
Length = 586
Score = 121 bits (304), Expect = 2e-25
Identities = 59/96 (61%), Positives = 68/96 (70%)
Frame = +3
Query: 3 SYLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLI 182
S+L SQG L Q SC ATPQQNGV ERKHRH+LE R+L++ S +PL + GE VLTA YLI
Sbjct: 450 SFLASQGVLHQTSCVATPQQNGVVERKHRHLLEIARALLFQSKLPLSYWGECVLTATYLI 509
Query: 183 NRTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFV 290
NR PS VL G +PY LF KP LK FGC CF+
Sbjct: 510 NRLPSRVLKGRTPYFVLFKQKPSYELLKCFGCLCFI 545
>gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1404
Score = 119 bits (299), Expect = 6e-25
Identities = 56/97 (57%), Positives = 74/97 (76%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+L +G + Q SCP TPQQNGVAERK+RH++E RS+++ + VP F G+AVLTA YLIN
Sbjct: 591 HLAKRGIIHQTSCPYTPQQNGVAERKNRHLMEVARSMMFHTSVPKRFWGDAVLTACYLIN 650
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLL 296
RTP+ VLS SP+E L + KP + +L+VFGC CFVL+
Sbjct: 651 RTPTKVLSDLSPFEVLNNTKPFIDHLRVFGCVCFVLI 687
>ref|XP_010496878.1| PREDICTED: uncharacterized protein LOC104773906 [Camelina sativa]
Length = 631
Score = 119 bits (298), Expect = 8e-25
Identities = 56/97 (57%), Positives = 72/97 (74%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+L G L Q SCP TPQQNGVAERK+RH++E RS+++ SHV + G+AV+TA YLIN
Sbjct: 464 HLAKHGILHQTSCPYTPQQNGVAERKNRHLMEVARSMMFHSHVTRRYWGDAVMTACYLIN 523
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLL 296
RTP+ VL+ SP+E L KP L +L+VFGC CFVL+
Sbjct: 524 RTPTKVLNDLSPFEVLNKFKPSLDHLRVFGCVCFVLV 560
>ref|XP_010495581.1| PREDICTED: uncharacterized protein LOC104772693 [Camelina sativa]
Length = 673
Score = 117 bits (294), Expect = 2e-24
Identities = 56/97 (57%), Positives = 71/97 (73%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+L G L Q SCP TPQQNGVAERK+RH++E RS+++ S+V F G+AV+ A YLIN
Sbjct: 317 HLAKHGILQQTSCPYTPQQNGVAERKNRHLMEVARSMMFHSNVTKRFWGDAVMMACYLIN 376
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFVLL 296
RTP+ VL+ SPYE L KP L +L+VFGC CFVL+
Sbjct: 377 RTPTKVLNDISPYEVLNKVKPSLDHLRVFGCVCFVLV 413
>ref|XP_010470454.1| PREDICTED: uncharacterized protein LOC104750360 [Camelina sativa]
Length = 690
Score = 117 bits (294), Expect = 2e-24
Identities = 55/95 (57%), Positives = 67/95 (70%)
Frame = +3
Query: 3 SYLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLI 182
+Y QG + Q SC TPQQNG ERKHRHIL R+L++ +H+P+ F GEAVLT+ YLI
Sbjct: 448 AYFREQGIIHQTSCVGTPQQNGHVERKHRHILNVSRALLFQAHLPIKFWGEAVLTSAYLI 507
Query: 183 NRTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCF 287
NRTPSSVL G +PYE L CKP L+VFG C+
Sbjct: 508 NRTPSSVLGGRTPYEVLHGCKPVYDQLRVFGSACY 542
>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
Length = 492
Score = 117 bits (294), Expect = 2e-24
Identities = 56/95 (58%), Positives = 68/95 (71%)
Frame = +3
Query: 6 YLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLIN 185
+L S G + Q +C TPQQNGV ERKHRH+LET R+L+Y SH+P F G+ +LTA YLIN
Sbjct: 153 FLASLGIIHQTTCVGTPQQNGVVERKHRHLLETCRALLYQSHLPKKFWGDCLLTATYLIN 212
Query: 186 RTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCFV 290
R PS VL+G PY+ LF PD S+LK FG CFV
Sbjct: 213 RFPSKVLNGKCPYQVLFGSLPDYSHLKSFGSLCFV 247
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 117 bits (293), Expect = 3e-24
Identities = 55/95 (57%), Positives = 67/95 (70%)
Frame = +3
Query: 3 SYLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLI 182
SY QG + Q SC TPQQNG ERKHRHIL R+L++ + +P+ F GEAV+TA YLI
Sbjct: 646 SYFKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLI 705
Query: 183 NRTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCF 287
NRTPSS+ +G SPYE L CKPD L+VFG C+
Sbjct: 706 NRTPSSIHNGLSPYELLHGCKPDYDQLRVFGSACY 740
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 117 bits (293), Expect = 3e-24
Identities = 55/95 (57%), Positives = 67/95 (70%)
Frame = +3
Query: 3 SYLTSQGTLAQLSCPATPQQNGVAERKHRHILETVRSLIYTSHVPL*FSGEAVLTAIYLI 182
SY QG + Q SC TPQQNG ERKHRHIL R+L++ + +P+ F GEAV+TA YLI
Sbjct: 646 SYFKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLI 705
Query: 183 NRTPSSVLSGTSPYEKLFSCKPDLSYLKVFGCTCF 287
NRTPSS+ +G SPYE L CKPD L+VFG C+
Sbjct: 706 NRTPSSIHNGLSPYELLHGCKPDYDQLRVFGSACY 740