BLASTX nr result

ID: Cinnamomum23_contig00043905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00043905
         (378 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010934014.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    81   3e-13
ref|XP_010242154.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    75   1e-11
ref|XP_009420436.1| PREDICTED: RING-H2 finger protein ATL29-like...    64   4e-08
ref|XP_010941172.1| PREDICTED: RING-H2 zinc finger protein RHA1a...    64   5e-08
ref|XP_010934015.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    63   7e-08
ref|XP_008797645.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    63   7e-08
ref|XP_008775840.1| PREDICTED: RING-H2 zinc finger protein RHA1a...    63   9e-08
ref|XP_008788730.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    62   1e-07
ref|XP_009409947.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    62   2e-07
ref|XP_010649449.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    61   3e-07
ref|XP_009395016.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    61   3e-07
ref|XP_010251394.1| PREDICTED: RING-H2 zinc finger protein RHA1a...    57   5e-06

>ref|XP_010934014.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Elaeis
           guineensis]
          Length = 165

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 49/107 (45%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
 Frame = -1

Query: 336 MGFPCNSYGVVMFEPLVYVLNFLDHVLLLVKLAFFYLGLFDPTGLAPPVDDHADRAAVVN 157
           MGFP   Y V + EPL+ +L FLDH+   + L  FYLGL+ P+ L P      +      
Sbjct: 1   MGFPLTCYYVAVPEPLILLLKFLDHIRFAISLILFYLGLY-PSSLPPTRYRDPEFHPT-- 57

Query: 156 RPAPPSP-PITSKLIKKSLPVVEFAAFAERSGRYKEDNQNPVCVVCL 19
            PA  +P P+TS  IK  LP VEFA+F ERSG   E  +  VCVVCL
Sbjct: 58  -PASDAPWPVTSISIKAQLPTVEFASFMERSGGRWEHGREFVCVVCL 103


>ref|XP_010242154.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Nelumbo
           nucifera]
          Length = 175

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 7/119 (5%)
 Frame = -1

Query: 336 MGFPCNSYGVVMFEPLVYVLNFLDHVLLLVKLAFFYLGLFDPTGLAPPVDDHADRAAVVN 157
           MGFPC   G+ M + + ++LN L HV ++V + FF++G+ D     PP  +H+  A   +
Sbjct: 1   MGFPC--VGIEMPKLIKHLLNLLAHVRIMVMMVFFHIGVLD-----PPNQEHSILAE--D 51

Query: 156 RPAPPSPPITSKL-------IKKSLPVVEFAAFAERSGRYKEDNQNPVCVVCLGCLERD 1
            P+P S  +  K+       +KKSLPVVEF  F +R+    +D    VC VCL CLER+
Sbjct: 52  EPSPSSSMVVKKMDVVAVEFVKKSLPVVEFGNFVDRTRSCPDDKL--VCAVCLCCLERN 108


>ref|XP_009420436.1| PREDICTED: RING-H2 finger protein ATL29-like [Musa acuminata subsp.
           malaccensis] gi|695063832|ref|XP_009420437.1| PREDICTED:
           RING-H2 finger protein ATL29-like [Musa acuminata subsp.
           malaccensis] gi|695063834|ref|XP_009420439.1| PREDICTED:
           RING-H2 finger protein ATL29-like [Musa acuminata subsp.
           malaccensis]
          Length = 279

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
 Frame = -1

Query: 336 MGFPCNSYGVVMFEPLVYVLNFLDHVLLLVKLAFFYLGLFDPTGLAPPVDDH-ADRAAVV 160
           MGFP   Y V++  P+ +V+N LD + L V +A FYL      GLA   +D+ A    + 
Sbjct: 114 MGFPSVCYTVILPRPVAFVVNLLDRIKLAVSMALFYL------GLATSYEDYFAFPLQLP 167

Query: 159 NRPAPPSPPITSKLIKKSLPVVEFAAFAERSGRYKEDNQNPVCVVCLGCLE 7
           + P+P S P     IK  LPVV F+     S    E     +C VCLG LE
Sbjct: 168 DLPSPLSLPSPPSAIKTRLPVVRFSTLRPSSHHGGE----AICAVCLGALE 214


>ref|XP_010941172.1| PREDICTED: RING-H2 zinc finger protein RHA1a-like [Elaeis
           guineensis]
          Length = 153

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 39/110 (35%), Positives = 58/110 (52%)
 Frame = -1

Query: 336 MGFPCNSYGVVMFEPLVYVLNFLDHVLLLVKLAFFYLGLFDPTGLAPPVDDHADRAAVVN 157
           MGFP   Y V++ +PL+ ++  LD + L V    F LG+      A   +D+    +  +
Sbjct: 1   MGFPSVCYCVILPKPLILLVQLLDCLKLAVSTVLFCLGV------ASSPEDYVYPLSAAD 54

Query: 156 RPAPPSPPITSKLIKKSLPVVEFAAFAERSGRYKEDNQNPVCVVCLGCLE 7
              P S PIT  +IK  +PVV+F++F   S + +E      CVVCLG LE
Sbjct: 55  FSVPLSLPITPSVIKSRIPVVKFSSFRRSSAQGEES----TCVVCLGALE 100


>ref|XP_010934015.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Elaeis
           guineensis]
          Length = 162

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 46/114 (40%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
 Frame = -1

Query: 336 MGFPCNSYGVVMFEPLVYVLNFLDHVLLLVKLAFFYLGLF----DPTGLAPPVDDHADRA 169
           MGFP     V + E L+ +L FLD++  +V L  FYLGL+     PT    P  D     
Sbjct: 1   MGFPLGGCYVAVPETLILLLKFLDYLRFVVCLILFYLGLYPSSVPPTPYRDPEFD----- 55

Query: 168 AVVNRPAPPSP---PITSKLIKKSLPVVEFAAFAERS-GRYKEDNQNPVCVVCL 19
                P P S    P+T+  IK  LP VEF +F ERS GR +E      CVVCL
Sbjct: 56  -----PTPASDALGPVTTTSIKARLPAVEFVSFVERSAGRCRESK----CVVCL 100


>ref|XP_008797645.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Phoenix
           dactylifera]
          Length = 167

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
 Frame = -1

Query: 336 MGFPCNSYGVVMFEPLVYVLNFLDHVLLLVKLAFFYLGLFDPTGLAP--PVDDHA--DRA 169
           MG+P  SYG V+ +P+V V+  +D++  +  L  + LGL+ P+  AP  P +D+A   +A
Sbjct: 1   MGYPSVSYGFVLPKPVVVVILLIDYIEFIFSLVLYNLGLY-PSSEAPLSPWEDYAFYFQA 59

Query: 168 AVVNRPAPPSPPITSKLIKKSLPVVEFAAFAERSGRYKEDNQNPVCVVCLGCLE 7
           A ++  A      T  LIK  L VVEF++ ++RS    +  +   C VCLG LE
Sbjct: 60  AELSSSATSVSVTTPSLIKSRLRVVEFSSLSKRSSEACQ-GEETACAVCLGELE 112


>ref|XP_008775840.1| PREDICTED: RING-H2 zinc finger protein RHA1a-like [Phoenix
           dactylifera]
          Length = 153

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 38/110 (34%), Positives = 55/110 (50%)
 Frame = -1

Query: 336 MGFPCNSYGVVMFEPLVYVLNFLDHVLLLVKLAFFYLGLFDPTGLAPPVDDHADRAAVVN 157
           MGFP   Y V++ +PL+ ++  LD +   V    F LG       A   +D+    +  +
Sbjct: 1   MGFPSVCYCVILPKPLILLVQLLDCLKFAVSAILFCLGF------ASSPEDYVYPLSATD 54

Query: 156 RPAPPSPPITSKLIKKSLPVVEFAAFAERSGRYKEDNQNPVCVVCLGCLE 7
              P SPPIT   IK  +PVV F++F + S + +E      C VCLG LE
Sbjct: 55  FSVPSSPPITPSEIKSRIPVVRFSSFRKSSAQGEES----TCAVCLGALE 100


>ref|XP_008788730.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Phoenix
           dactylifera]
          Length = 153

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 40/110 (36%), Positives = 58/110 (52%)
 Frame = -1

Query: 336 MGFPCNSYGVVMFEPLVYVLNFLDHVLLLVKLAFFYLGLFDPTGLAPPVDDHADRAAVVN 157
           MGFP   Y V++ +PL+ V+  L  + L V +  +YLGL   T L    +D+    +  +
Sbjct: 1   MGFPSVCYCVILPKPLILVVQLLALLKLAVAMILYYLGL---TSLP---EDYGYPLSATD 54

Query: 156 RPAPPSPPITSKLIKKSLPVVEFAAFAERSGRYKEDNQNPVCVVCLGCLE 7
              P S P T   IK  +PVV+F++F   S + +E    P C VCLG LE
Sbjct: 55  FSVPSSLPSTPSAIKSGIPVVKFSSFRRSSSQGEE----PTCAVCLGELE 100


>ref|XP_009409947.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Musa acuminata
           subsp. malaccensis]
          Length = 156

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
 Frame = -1

Query: 336 MGFPCNSYGVVMFEPLVYVLNFLDHVLLLVKLAFFYLGLF----DPTGLAPPVDDHADRA 169
           MGFP   Y V++  P+  V++ LD + L V +A F+LGL     D     PP+ D     
Sbjct: 1   MGFPSVCYTVILPRPVALVVHLLDRIKLAVSMALFHLGLISSYEDHFLYPPPLPD----- 55

Query: 168 AVVNRPAPP-SPPITSKLIKKSLPVVEFAAFAERSGRYKEDNQNPVCVVCLGCLE 7
              N P+P  S P+ +  IK  LPVV F+       + +     PVC VCLG LE
Sbjct: 56  --FNPPSPSFSLPLPASAIKTGLPVVRFS----NHRKTRLHRCEPVCAVCLGALE 104


>ref|XP_010649449.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Vitis vinifera]
          Length = 145

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
 Frame = -1

Query: 291 LVYVLNFLDHVLLLVKLAFFYLGLFDPTGLAPPVDDHADRAAVVNRPAPPS---PPITSK 121
           +V++LN L +  ++V +A  +LGLF P   A   +  A    VV     PS    P+   
Sbjct: 7   VVFLLNLLGYFKVIVMVALAHLGLFHPPEQAYSEEHPASTYVVVMDGQTPSLVPVPVVMA 66

Query: 120 LIKKSLPVVEFAAFAERSGRYKEDNQNPVCVVCLGCLER 4
            IKK +PVVE+ +F ER G +  ++++ VC VCL C++R
Sbjct: 67  WIKKRVPVVEYGSFLERLGMH--EDEDAVCSVCLDCIKR 103


>ref|XP_009395016.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Musa acuminata
           subsp. malaccensis]
          Length = 151

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
 Frame = -1

Query: 336 MGFPCNSYGVVMFEPLVYVLNFLDHVLLLVKLAFFYLGLFDPTGLAPPVDDHADRAAVVN 157
           MGFP   Y V++  P+  V++ LD + L V +A F L      GLA   +DH      + 
Sbjct: 1   MGFPSVCYTVILPRPVALVVHLLDRIKLAVSMALFCL------GLASSHEDHFLFPLQIP 54

Query: 156 ---RPAPPSPPITSKLIKKSLPVVEFAAFAERSGRYKEDNQNPVCVVCLGCLE 7
               P+ P+ PI    IK  LPVV F+       R++ D ++ VC VCLG LE
Sbjct: 55  DFLPPSSPALPIPPSAIKTRLPVVRFS-------RFRIDGRDAVCSVCLGALE 100


>ref|XP_010251394.1| PREDICTED: RING-H2 zinc finger protein RHA1a-like [Nelumbo
           nucifera]
          Length = 196

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
 Frame = -1

Query: 339 IMGFPCNSYGVVMFEPLVYVLNFLDHVLLLVKLAFFYLGL---FDPTGL-----APPVDD 184
           +MGF C   G+ M + +  +L+ +++V LL+  A F+LGL   F P+ L     A  V +
Sbjct: 1   MMGFSC-CIGIKMPKLVSDLLSLVEYVKLLMVAALFHLGLLTLFRPSHLRDAHGADHVQE 59

Query: 183 HADRAAVVNRPAPPSPPITS---KLIKKSLPVVEFAAFAERSGRYKEDNQN-PVCVVCLG 16
                  +  P  P+  +T    + IKK LP VEF  F ERSG  +E+ ++  VC++CL 
Sbjct: 60  SGGYLPSLTSPVVPATVLTPTRLEAIKKRLPAVEFGDFLERSGGNREEMEHQSVCMICLC 119

Query: 15  CLER 4
            LE+
Sbjct: 120 SLEK 123


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