BLASTX nr result
ID: Cinnamomum23_contig00043794
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00043794
(296 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD15380.1| putative retroelement pol polyprotein [Arabidopsi... 98 2e-18
gb|ACY01923.1| hypothetical protein [Beta vulgaris] 83 6e-14
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers... 80 4e-13
gb|AAG10810.1|AC018460_4 Hypothetical protein [Arabidopsis thali... 80 7e-13
gb|AEL30347.1| copia-like polyprotein [Arachis hypogaea] 79 9e-13
emb|CAN83366.1| hypothetical protein VITISV_041663 [Vitis vinifera] 79 1e-12
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera] 79 1e-12
emb|CAN67626.1| hypothetical protein VITISV_007389 [Vitis vinifera] 79 1e-12
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera] 79 1e-12
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera] 79 1e-12
emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera] 79 2e-12
emb|CAN78212.1| hypothetical protein VITISV_038824 [Vitis vinifera] 79 2e-12
emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera] 78 2e-12
dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis tha... 78 3e-12
gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana] 77 5e-12
emb|CAN63034.1| hypothetical protein VITISV_044052 [Vitis vinifera] 77 6e-12
gb|AAL67590.1|AC018929_12 putative polyprotein [Oryza sativa Jap... 76 8e-12
gb|EMT16342.1| hypothetical protein F775_52438 [Aegilops tauschii] 76 1e-11
dbj|BAF36296.1| hypothetical protein [Ipomoea trifida] 75 1e-11
gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida] 75 1e-11
>gb|AAD15380.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 557
Score = 98.2 bits (243), Expect = 2e-18
Identities = 56/102 (54%), Positives = 68/102 (66%), Gaps = 5/102 (4%)
Frame = +1
Query: 1 DTELHSINKCRQRNDWPK*KSAIKAELESLNKRGVFGLIVQTPKE-----FEMKDLGKTR 165
D E SI +C Q +DWPK AI AEL+ L KR VF +V+T KE FEMKDLGKT+
Sbjct: 341 DHEPTSIEECTQISDWPKWNEAIDAELKFLAKREVFRPVVRTSKEYLKKEFEMKDLGKTK 400
Query: 166 FCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMV 291
FCL LQI+ N + +Q YT+ VLK F M+ AYPLS+PMV
Sbjct: 401 FCLGLQIEHLKNVILEYQETYTKNVLKRFYMDGAYPLSSPMV 442
>gb|ACY01923.1| hypothetical protein [Beta vulgaris]
Length = 572
Score = 83.2 bits (204), Expect = 6e-14
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = +1
Query: 130 KEFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMVV 294
KEFEMKDLGKT+FCL LQ++ NG+ VHQSNYTEK+LK F M+KA+P+S+PMVV
Sbjct: 263 KEFEMKDLGKTKFCLGLQMEHLRNGIFVHQSNYTEKILKCFFMDKAHPISSPMVV 317
>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
Length = 779
Score = 80.5 bits (197), Expect = 4e-13
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = +1
Query: 130 KEFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMVV 294
+EFEMKDLGKT+FCL LQI+ NG+ VHQS YTEK+LK F M+ ++PLSTPMVV
Sbjct: 592 REFEMKDLGKTKFCLGLQIENLSNGILVHQSTYTEKILKRFYMDNSHPLSTPMVV 646
Score = 59.3 bits (142), Expect = 1e-06
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = +1
Query: 1 DTELHSINKCRQRNDWPK*KSAIKAELESLNKRGVFGLIVQTPK 132
D+E S+++CRQRNDWPK K AI+AEL SL KR FG I++TP+
Sbjct: 365 DSEPKSVHECRQRNDWPKWKDAIQAELASLEKRESFGPIIRTPE 408
>gb|AAG10810.1|AC018460_4 Hypothetical protein [Arabidopsis thaliana]
gi|12320956|gb|AAG50601.1|AC079605_6 hypothetical
protein [Arabidopsis thaliana]
Length = 484
Score = 79.7 bits (195), Expect = 7e-13
Identities = 38/54 (70%), Positives = 46/54 (85%)
Frame = +1
Query: 130 KEFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMV 291
+EFEMKDLGKT+FCL LQI+ +G+ VHQSNYT+K+LK F M+KA PLSTPMV
Sbjct: 276 EEFEMKDLGKTKFCLGLQIEHFQDGIFVHQSNYTKKILKRFNMDKANPLSTPMV 329
>gb|AEL30347.1| copia-like polyprotein [Arachis hypogaea]
Length = 692
Score = 79.3 bits (194), Expect = 9e-13
Identities = 37/61 (60%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +1
Query: 115 IVQTPKE-FEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMV 291
I++T KE FEMKDLG+T+FC LQI+ NG+ +HQ+ YTEK+LK F M+K++PLSTPM+
Sbjct: 441 IIKTLKEEFEMKDLGRTKFCFDLQIEHTKNGIFIHQATYTEKILKRFYMDKSHPLSTPMI 500
Query: 292 V 294
V
Sbjct: 501 V 501
Score = 58.2 bits (139), Expect = 2e-06
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = +1
Query: 1 DTELHSINKCRQRNDWPK*KSAIKAELESLNKRGVFGLIVQTPKEFEMKDLGKTRFCLKL 180
D E + +CRQ+NDWPK K +KAEL+SL KR VFG +V+TP+ ++K +G ++
Sbjct: 219 DLEPRLVEECRQKNDWPKWKEVMKAELDSLAKREVFGPVVRTPE--DVKPVGYQWVFVRK 276
Query: 181 QIKRN 195
+ K+N
Sbjct: 277 RNKKN 281
>emb|CAN83366.1| hypothetical protein VITISV_041663 [Vitis vinifera]
Length = 407
Score = 79.0 bits (193), Expect = 1e-12
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +1
Query: 130 KEFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMVV 294
KEFEMKDLGKT+FCL LQI+ NG+ VHQS Y +KVLK F M+KA+PLS+PMVV
Sbjct: 198 KEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVV 252
>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
Length = 1496
Score = 79.0 bits (193), Expect = 1e-12
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +1
Query: 130 KEFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMVV 294
KEFEMKDLGKT+FCL LQI+ NG+ VHQS Y +KVLK F M+KA+PLS+PMVV
Sbjct: 1176 KEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVV 1230
Score = 60.5 bits (145), Expect = 4e-07
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +1
Query: 1 DTELHSINKCRQRNDWPK*KSAIKAELESLNKRGVFGLIVQTPKE 135
D E ++ +CR RNDWPK K AI+AEL SL KR VFG +VQTP++
Sbjct: 948 DPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPVVQTPED 992
>emb|CAN67626.1| hypothetical protein VITISV_007389 [Vitis vinifera]
Length = 542
Score = 79.0 bits (193), Expect = 1e-12
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = +1
Query: 130 KEFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMVV 294
KEF+MKDLGKTR+CL LQI+ NG+ VHQS Y EKVLK F MEK++P+++PMVV
Sbjct: 359 KEFDMKDLGKTRYCLSLQIEHCSNGILVHQSTYIEKVLKRFYMEKSHPINSPMVV 413
>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
Length = 1501
Score = 79.0 bits (193), Expect = 1e-12
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +1
Query: 130 KEFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMVV 294
KEFEMKDLGKT+FCL LQI+ NG+ VHQS Y +KVLK F M+KA+PLS+PMVV
Sbjct: 1181 KEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVV 1235
Score = 60.5 bits (145), Expect = 4e-07
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +1
Query: 1 DTELHSINKCRQRNDWPK*KSAIKAELESLNKRGVFGLIVQTPKE 135
D E ++ +CR RNDWPK K AI+AEL SL KR VFG +VQTP++
Sbjct: 974 DPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPVVQTPED 1018
>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
Length = 1306
Score = 79.0 bits (193), Expect = 1e-12
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +1
Query: 130 KEFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMVV 294
KEFEMKDLGKT+FCL LQI+ NG+ VHQS Y +KVLK F M+KA+PLS+PMVV
Sbjct: 1060 KEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVV 1114
Score = 58.5 bits (140), Expect = 2e-06
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +1
Query: 1 DTELHSINKCRQRNDWPK*KSAIKAELESLNKRGVFGLIVQTPKE 135
D E ++ +CR RNDWPK K I+AEL SL KR VFG +VQTP++
Sbjct: 832 DPEPRNVEECRHRNDWPKWKEXIQAELNSLTKREVFGPVVQTPED 876
>emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera]
Length = 701
Score = 78.6 bits (192), Expect = 2e-12
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = +1
Query: 130 KEFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMVV 294
KEFEMKDLGKT+FCL LQ++ NG+ VHQS Y +KVLK F M+KA+PLS+PMVV
Sbjct: 392 KEFEMKDLGKTKFCLGLQVEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVV 446
Score = 60.8 bits (146), Expect = 3e-07
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +1
Query: 1 DTELHSINKCRQRNDWPK*KSAIKAELESLNKRGVFGLIVQTPKE 135
D E ++ +CR RNDWPK K AI+AEL SL KR VFG IVQTP++
Sbjct: 164 DPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPIVQTPED 208
>emb|CAN78212.1| hypothetical protein VITISV_038824 [Vitis vinifera]
Length = 839
Score = 78.6 bits (192), Expect = 2e-12
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = +1
Query: 130 KEFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMVV 294
KEFEMKDLGKT+FCL LQI+ NG+ VHQS Y +K+LK F M+KA+PLS+PMVV
Sbjct: 526 KEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKILKHFYMDKAHPLSSPMVV 580
>emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera]
Length = 570
Score = 78.2 bits (191), Expect = 2e-12
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +1
Query: 130 KEFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMVV 294
KEFEMKDLGKT+FCL LQI+ NG+ VHQS Y +KVLK F M+KA+PLS+PMVV
Sbjct: 365 KEFEMKDLGKTKFCLGLQIEYFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVV 419
Score = 57.0 bits (136), Expect = 5e-06
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +1
Query: 1 DTELHSINKCRQRNDWPK*KSAIKAELESLNKRGVFGLIVQTPKE 135
D + S+ +CR RNDWPK K I+AEL SL KR +FG IV+TP++
Sbjct: 137 DLKPRSVEECRHRNDWPKWKEVIQAELNSLTKREIFGPIVKTPED 181
>dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis thaliana]
Length = 1123
Score = 77.8 bits (190), Expect = 3e-12
Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Frame = +1
Query: 67 IKAELESLNKRGVFGLIVQT----PKEFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTE 234
I ++ LN G G I QT KEFEMKDLGKT+FCL LQ++ G+ VHQ YTE
Sbjct: 808 IAVYVDDLNILGTSGEIAQTVEYLKKEFEMKDLGKTKFCLGLQLEYIDKGILVHQKAYTE 867
Query: 235 KVLK*FGMEKAYPLSTPMVV 294
VLK F M+KA+PL++PM V
Sbjct: 868 TVLKRFNMDKAHPLTSPMQV 887
>gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]
Length = 1141
Score = 77.0 bits (188), Expect = 5e-12
Identities = 42/80 (52%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Frame = +1
Query: 67 IKAELESLNKRGVFGLIVQT----PKEFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTE 234
I ++ LN G G I QT KEFEMKDLGKT+FCL LQ++ G+ VHQ YTE
Sbjct: 808 IAVYVDDLNILGTSGEIAQTVEYLKKEFEMKDLGKTKFCLGLQLEYVDKGILVHQRAYTE 867
Query: 235 KVLK*FGMEKAYPLSTPMVV 294
+LK F M+KA+PL++PM V
Sbjct: 868 TILKRFNMDKAHPLTSPMQV 887
>emb|CAN63034.1| hypothetical protein VITISV_044052 [Vitis vinifera]
Length = 820
Score = 76.6 bits (187), Expect = 6e-12
Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Frame = +1
Query: 61 SAIKAELESLNKRGVFGLIVQTPK----EFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNY 228
S I +++LN G + +T EFEMKD+GKT+FCL LQIK NG+ VHQS Y
Sbjct: 475 SIIAVYVDNLNLVGTPEELTKTXNYLKNEFEMKDIGKTKFCLGLQIKHFQNGVLVHQSTY 534
Query: 229 TEKVLK*FGMEKAYPLSTPMVV 294
+KVL F M+KA+PLS+PMVV
Sbjct: 535 IKKVLMRFYMDKAHPLSSPMVV 556
>gb|AAL67590.1|AC018929_12 putative polyprotein [Oryza sativa Japonica Group]
gi|31433666|gb|AAP55150.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 419
Score = 76.3 bits (186), Expect = 8e-12
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = +1
Query: 133 EFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMVV 294
EFEMKDLG+T+FCL LQ++ NG+ VHQS YT+KVL+ F M KA+PL TPMVV
Sbjct: 100 EFEMKDLGQTKFCLVLQVEHLPNGILVHQSTYTKKVLERFNMSKAHPLKTPMVV 153
>gb|EMT16342.1| hypothetical protein F775_52438 [Aegilops tauschii]
Length = 2020
Score = 75.9 bits (185), Expect = 1e-11
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = +1
Query: 133 EFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMV 291
EFEMKDLGKT+FCL LQ++ + +G+ VHQS YT+KVL+ FG +KAYP TPMV
Sbjct: 126 EFEMKDLGKTKFCLGLQLEHSPDGILVHQSAYTQKVLERFGFDKAYPSKTPMV 178
>dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]
Length = 1291
Score = 75.5 bits (184), Expect = 1e-11
Identities = 35/54 (64%), Positives = 45/54 (83%)
Frame = +1
Query: 133 EFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMVV 294
EFEMKDLGKT+FCL LQI+ NG+ +HQ+NY K+L+ F M+K++PLSTPMVV
Sbjct: 868 EFEMKDLGKTKFCLGLQIEHLPNGIFIHQANYVNKLLEKFYMDKSHPLSTPMVV 921
>gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida]
Length = 1190
Score = 75.5 bits (184), Expect = 1e-11
Identities = 35/54 (64%), Positives = 45/54 (83%)
Frame = +1
Query: 133 EFEMKDLGKTRFCLKLQIKRNFNGMSVHQSNYTEKVLK*FGMEKAYPLSTPMVV 294
EFEMKDLGKT+FCL LQI+ NG+ +HQ+NY K+L+ F M+K++PLSTPMVV
Sbjct: 868 EFEMKDLGKTKFCLGLQIEHLPNGIFIHQANYVNKLLEKFYMDKSHPLSTPMVV 921