BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00043790
         (238 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010088408.1| Retrovirus-related Pol polyprotein from tran...    59   1e-06

>ref|XP_010088408.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis] gi|587844865|gb|EXB35423.1|
           Retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Morus notabilis]
          Length = 443

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 35/72 (48%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
 Frame = +1

Query: 31  VDISRNGNIICSGRMHDNLFYIYPIAPTLHNAQLEXXXXXXXXXXXI---NDTYLWHLRL 201
           V ISRNG  I SGR+ D L+ I PI  +L N ++            I   N+TYLWHL L
Sbjct: 296 VHISRNGLNIYSGRLDDGLYCIKPIPNSLLNTEMFRVAEPKNKKQKISHENNTYLWHLGL 355

Query: 202 DHINLKRIQRLV 237
            HINL RI+RLV
Sbjct: 356 GHINLNRIERLV 367