BLASTX nr result
ID: Cinnamomum23_contig00043541
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00043541
(315 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 80 2e-15
gb|AAK29467.1| polyprotein-like [Solanum chilense] 76 4e-15
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 69 7e-12
emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera] 67 4e-09
emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera] 67 6e-09
emb|CAN61851.1| hypothetical protein VITISV_036278 [Vitis vinifera] 66 8e-09
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 66 8e-09
emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera] 65 1e-08
emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera] 65 1e-08
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera] 64 3e-08
emb|CAN69994.1| hypothetical protein VITISV_018606 [Vitis vinifera] 64 5e-08
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 63 7e-08
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 63 9e-08
emb|CAN65149.1| hypothetical protein VITISV_037085 [Vitis vinifera] 62 1e-07
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera] 62 1e-07
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 62 1e-07
emb|CAN70570.1| hypothetical protein VITISV_043111 [Vitis vinifera] 62 2e-07
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 59 2e-07
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 59 2e-07
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 59 2e-07
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 80.1 bits (196), Expect(2) = 2e-15
Identities = 38/65 (58%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTY-RVELPKGRKVLK 238
Y +++ IL+T+EGE ES EV +H+DKD W+KAMQ++M SLKKN TY V+ PKG+KVLK
Sbjct: 158 YPSSEYILITDEGEPESLQEVLSHSDKDHWLKAMQEDMDSLKKNETYDLVKPPKGKKVLK 217
Query: 239 SKWVF 253
++W+F
Sbjct: 218 NRWLF 222
Score = 28.5 bits (62), Expect(2) = 2e-15
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 262 RDDSGKLIKRKAQLVVKG 315
+ D KL+KRKA+LVVKG
Sbjct: 225 KKDGNKLVKRKARLVVKG 242
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 76.3 bits (186), Expect(2) = 4e-15
Identities = 36/65 (55%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLK 238
Y +++ +L+ EGE E+ EV +H +K +WMKAM +EMGSL+KN TY+ VELPKG++ LK
Sbjct: 798 YPSSEYVLIKYEGEPENLKEVLSHPEKSQWMKAMHEEMGSLQKNGTYQLVELPKGKRPLK 857
Query: 239 SKWVF 253
KWVF
Sbjct: 858 CKWVF 862
Score = 31.2 bits (69), Expect(2) = 4e-15
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 253 QLKRDDSGKLIKRKAQLVVKG 315
+LK+D +GKL++ KA+LVVKG
Sbjct: 863 KLKKDGNGKLVRYKARLVVKG 883
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease [Nicotiana tabacum]
gi|20045|emb|CAA32025.1| unnamed protein product
[Nicotiana tabacum]
Length = 1328
Score = 69.3 bits (168), Expect(2) = 7e-12
Identities = 34/65 (52%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLK 238
Y + + +L++++ E ES EV +H +K++ MKAMQ+EM SL+KN TY+ VELPKG++ LK
Sbjct: 797 YPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLK 856
Query: 239 SKWVF 253
KWVF
Sbjct: 857 CKWVF 861
Score = 27.3 bits (59), Expect(2) = 7e-12
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 253 QLKRDDSGKLIKRKAQLVVKG 315
+LK+D KL++ KA+LVVKG
Sbjct: 862 KLKKDGDCKLVRYKARLVVKG 882
>emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]
Length = 788
Score = 67.4 bits (163), Expect = 4e-09
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLK 238
Y + + +L ++ GE +Y EV H +K EW++AM +EM S KNNTY +ELPKG++ LK
Sbjct: 451 YNSDEYLLFSBGGESXNYQEVLLHDEKKEWLRAMHEEMKSFHKNNTYELMELPKGKRALK 510
Query: 239 SKWV 250
+KWV
Sbjct: 511 NKWV 514
>emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera]
Length = 903
Score = 66.6 bits (161), Expect = 6e-09
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLK 238
Y D +LLT+ GE ESY E +K +W+ AMQDEM SL +N++Y VELPKG++ LK
Sbjct: 543 YSVDDYVLLTDGGEPESYKEAMGDENKIKWVDAMQDEMKSLHENHSYELVELPKGKRALK 602
Query: 239 SKWVF 253
++WV+
Sbjct: 603 NRWVY 607
>emb|CAN61851.1| hypothetical protein VITISV_036278 [Vitis vinifera]
Length = 973
Score = 66.2 bits (160), Expect = 8e-09
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLK 238
Y D +LLTN GE ESY E +K +W+ AMQDEM SL +N+++ V+LPKG+K LK
Sbjct: 605 YSVDDYVLLTNRGEPESYEEAMGVENKMKWVDAMQDEMKSLHENHSFELVKLPKGKKALK 664
Query: 239 SKWVF 253
++WV+
Sbjct: 665 NRWVY 669
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 66.2 bits (160), Expect = 8e-09
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLK 238
Y D +LLT+EGE ESY+E +K +W+ AM+DEM SL +N+++ V+LPKG++ LK
Sbjct: 793 YSVDDYVLLTDEGEPESYVEAMKDENKMKWVDAMRDEMESLHENHSFELVKLPKGKRALK 852
Query: 239 SKWVF 253
++WV+
Sbjct: 853 NRWVY 857
>emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera]
Length = 649
Score = 65.5 bits (158), Expect = 1e-08
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLK 238
Y D +LLT+EGE ESY E +K +W+ AMQDEM SL +N + ++LPKG+K LK
Sbjct: 582 YSVDDYVLLTDEGEPESYEEAMGDENKMKWVNAMQDEMKSLHENRFFELIKLPKGKKALK 641
Query: 239 SKWVF 253
++WV+
Sbjct: 642 NRWVY 646
>emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]
Length = 623
Score = 65.5 bits (158), Expect = 1e-08
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLK 238
Y + + +LL + GE E+Y EV + +K EW++AM +E+ SL KNNT+ +ELPKG++ LK
Sbjct: 344 YTSNEYLLLFDGGEPENYQEVLLYDEKKEWLRAMHEEIKSLHKNNTFELMELPKGKRTLK 403
Query: 239 SKWV 250
+KWV
Sbjct: 404 NKWV 407
>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
Length = 1204
Score = 64.3 bits (155), Expect = 3e-08
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLK 238
Y D +LLT+ GELESY+E +K +W+ AMQDEM SL N+ + V+LPKG++ LK
Sbjct: 665 YSVDDYVLLTDGGELESYVEXMEDENKMKWVDAMQDEMESLHVNHYFELVKLPKGKRALK 724
Query: 239 SKWVF 253
+WV+
Sbjct: 725 XRWVY 729
>emb|CAN69994.1| hypothetical protein VITISV_018606 [Vitis vinifera]
Length = 626
Score = 63.5 bits (153), Expect = 5e-08
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Frame = +2
Query: 83 LLTNEG----ELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYRV-ELPKGRKVLKSKW 247
++ N+G ELE+Y E + +K EW+KAM +EM SL KNNTY + ELPKG++ LK+KW
Sbjct: 283 IVENDGLEQEELENYQEALLYDEKKEWLKAMHEEMKSLHKNNTYELTELPKGKRALKNKW 342
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 63.2 bits (152), Expect = 7e-08
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTY-RVELPKGRKVLK 238
Y + D + LT+EGE E YLE +K +W+ AMQDEM SL N+T+ V+LPK +K L+
Sbjct: 741 YPSDDYVTLTDEGEPECYLEAMESEEKKKWLDAMQDEMKSLHDNHTFDLVKLPKDKKALE 800
Query: 239 SKWVF 253
++W++
Sbjct: 801 NRWIY 805
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 62.8 bits (151), Expect = 9e-08
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLK 238
Y D +LL + GE ESY+E +K +W+ AMQDEM SL +N+++ V+LPKG++ LK
Sbjct: 696 YSVDDYVLLIDGGEPESYVEAMEDENKMKWVDAMQDEMESLHENHSFELVKLPKGKRALK 755
Query: 239 SKWVF 253
++WV+
Sbjct: 756 NRWVY 760
>emb|CAN65149.1| hypothetical protein VITISV_037085 [Vitis vinifera]
Length = 685
Score = 62.4 bits (150), Expect = 1e-07
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLK 238
Y D +LLT GE ESY EV + +K +W+ MQDEM SL +N+++ V+LPKG++ LK
Sbjct: 563 YFVDDYVLLTXGGEPESYEEVTRYENKMKWVDVMQDEMKSLHENHSFEPVKLPKGKRSLK 622
Query: 239 SKWVF 253
+ WV+
Sbjct: 623 NGWVY 627
>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
Length = 1017
Score = 62.4 bits (150), Expect = 1e-07
Identities = 29/65 (44%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLK 238
Y D +LLT+ GE ESY+E +K +W+ A+Q+EM SL +N++++ V+LPKG++ LK
Sbjct: 547 YSVDDYVLLTDGGEPESYVEAMEDENKMKWVDAIQNEMESLHENHSFKLVKLPKGKRALK 606
Query: 239 SKWVF 253
++WV+
Sbjct: 607 NRWVY 611
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 62.0 bits (149), Expect = 1e-07
Identities = 29/59 (49%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLKSKWVF 253
+LLT+ GE +S+ E K++W++AMQDE+ SL +N T+ V+LPKG++ LK+KWVF
Sbjct: 804 VLLTDGGEPDSFEEAIDDEHKEKWIEAMQDEIKSLHENKTFELVKLPKGKRALKNKWVF 862
>emb|CAN70570.1| hypothetical protein VITISV_043111 [Vitis vinifera]
Length = 891
Score = 61.6 bits (148), Expect = 2e-07
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +2
Query: 62 YLAAD*ILLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKG 223
Y + D +LL++ GE ESY EV H +K EW++AM +EM SL KNNTY +ELPKG
Sbjct: 395 YTSDDYLLLSDGGEPESYQEVLLHDEKKEWLRAMHEEMKSLHKNNTYELMELPKG 449
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 58.5 bits (140), Expect(2) = 2e-07
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 LLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLKSKWVF 253
LL+ +GE ++ E +D WM AMQ+E+ +L +NNT+ VELPKGRK + +KWVF
Sbjct: 781 LLSEDGEPSTFHEAVNGSDASLWMAAMQEEIEALHRNNTWELVELPKGRKAIGNKWVF 838
Score = 22.7 bits (47), Expect(2) = 2e-07
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +1
Query: 253 QLKRDDSGKLIKRKAQLVVKG 315
++KRD + ++ + +A+LVVKG
Sbjct: 839 KIKRDGNDQVERYRARLVVKG 859
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 58.5 bits (140), Expect(2) = 2e-07
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 LLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLKSKWVF 253
L+T EGE ++ E +D +WM AM +EM +L +N T+ VELPKGRK + +KWV+
Sbjct: 781 LITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVY 838
Score = 22.7 bits (47), Expect(2) = 2e-07
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +1
Query: 253 QLKRDDSGKLIKRKAQLVVKG 315
++KRD + ++ + +A+LVVKG
Sbjct: 839 KIKRDGNDQVERYRARLVVKG 859
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 58.5 bits (140), Expect(2) = 2e-07
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 LLTNEGELESYLEVKTHADKDEWMKAMQDEMGSLKKNNTYR-VELPKGRKVLKSKWVF 253
L+T EGE ++ E +D +WM AM +EM +L +N T+ VELPKGRK + +KWV+
Sbjct: 781 LITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVY 838
Score = 22.7 bits (47), Expect(2) = 2e-07
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +1
Query: 253 QLKRDDSGKLIKRKAQLVVKG 315
++KRD + ++ + +A+LVVKG
Sbjct: 839 KIKRDGNDQVERYRARLVVKG 859