BLASTX nr result
ID: Cinnamomum23_contig00043085
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00043085
(226 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX96450.1| retrotransposon protein, putative, Ty3-gypsy sub-... 105 2e-20
gb|AAX96226.1| retrotransposon protein, putative, Ty3-gypsy sub-... 104 2e-20
gb|ABA95128.1| retrotransposon protein, putative, Ty3-gypsy subc... 103 6e-20
emb|CAE75972.1| B1160F02.3 [Oryza sativa Japonica Group] 102 8e-20
gb|AAN16322.1| putative polyprotein [Oryza sativa Japonica Group... 102 1e-19
gb|AAS90689.2| putative polyprotein [Oryza sativa Japonica Group] 102 1e-19
gb|ABB47119.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
gb|ABA98204.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
gb|ABA98612.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
gb|ABA98437.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
gb|ABA97250.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
gb|ABA98406.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
gb|ABA98260.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
gb|ABA97433.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
gb|ABA96803.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
gb|ABA92051.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
gb|ABA94569.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
gb|ABA95224.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
gb|ABA94346.1| retrotransposon protein, putative, Ty3-gypsy subc... 102 1e-19
>gb|AAX96450.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77549773|gb|ABA92570.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1723
Score = 105 bits (261), Expect = 2e-20
Identities = 44/73 (60%), Positives = 60/73 (82%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AHHT+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1279 ERLCVPDDKELKDLILTEAHHTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1338
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1339 QRVKAEHQRPAGL 1351
>gb|AAX96226.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77549885|gb|ABA92682.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1285
Score = 104 bits (260), Expect = 2e-20
Identities = 44/73 (60%), Positives = 60/73 (82%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+HLGSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 841 ERLCVPDDKELKDLILTEAHQTQYSIHLGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 900
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 901 QRVKAEHQRPAGL 913
>gb|ABA95128.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1309
Score = 103 bits (256), Expect = 6e-20
Identities = 44/73 (60%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M KEIAEFV+ C C
Sbjct: 865 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRKEIAEFVALCDVC 924
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 925 QRVKAEHQRPAGL 937
>emb|CAE75972.1| B1160F02.3 [Oryza sativa Japonica Group]
Length = 1430
Score = 102 bits (255), Expect = 8e-20
Identities = 43/73 (58%), Positives = 60/73 (82%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV+M +EIAEFV+ C C
Sbjct: 1012 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVRMRREIAEFVALCDVC 1071
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1072 QRVKAEHQRPAGL 1084
>gb|AAN16322.1| putative polyprotein [Oryza sativa Japonica Group]
gi|31430814|gb|AAP52680.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1796
Score = 102 bits (254), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1352 ERLCVPDDKELKELILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1411
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1412 QRVKAEHQRPAGL 1424
>gb|AAS90689.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1708
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1264 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1323
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1324 QRVKAEHQRPAGL 1336
>gb|ABB47119.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1522
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1078 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1137
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1138 QRVKAEHQRPAGL 1150
>gb|ABA98204.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1521
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1077 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1136
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1137 QRVKAEHQRPAGL 1149
>gb|ABA98612.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1775
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1385 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1444
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1445 QRVKAEHQRPAGL 1457
>gb|ABA98437.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1825
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1381 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1440
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1441 QRVKAEHQRPAGL 1453
>gb|ABA97250.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1429
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1059 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1118
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1119 QRVKAEHQRPAGL 1131
>gb|ABA98406.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1611
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1167 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1226
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1227 QRVKAEHQRPAGL 1239
>gb|ABA98260.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1360
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV + +++K ++T+AH TRYS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1111 ERLCVPENKELKDLILTEAHQTRYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1170
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1171 QRVKAEHQRPAGL 1183
>gb|ABA97433.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1672
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1228 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1287
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1288 QRVKAEHQRPAGL 1300
>gb|ABA96803.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1500
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1056 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1115
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1116 QRVKAEHQRPAGL 1128
>gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1687
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1289 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1348
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1349 QRVKAEHQRPAGL 1361
>gb|ABA92051.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1777
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1333 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKERFWWVSMRREIAEFVALCDVC 1392
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1393 QRVKAEHQRPAGL 1405
>gb|ABA94569.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1777
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1333 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1392
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1393 QRVKAEHQRPAGL 1405
>gb|ABA95224.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1570
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 1333 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKERFWWVSMRREIAEFVALCDVC 1392
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 1393 QRVKAEHQRPAGL 1405
>gb|ABA94346.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 960
Score = 102 bits (253), Expect = 1e-19
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = -2
Query: 219 DRLCVSDVQDIKLELMTDAHHTRYSVHLGSTKMYQNLKNLFWWVKMNKEIAEFVSRCMTC 40
+RLCV D +++K ++T+AH T+YS+H GSTKMYQ+LK FWWV M +EIAEFV+ C C
Sbjct: 549 ERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 608
Query: 39 QQIKAEHKKPPGL 1
Q++KAEH++P GL
Sbjct: 609 QRVKAEHQRPAGL 621