BLASTX nr result
ID: Cinnamomum23_contig00042866
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cinnamomum23_contig00042866 (722 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABA97563.1| retrotransposon protein, putative, unclassified [... 60 1e-06 gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 58 5e-06 gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 58 5e-06 gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi... 58 6e-06 gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 58 6e-06 gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 58 6e-06 >gb|ABA97563.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 839 Score = 60.1 bits (144), Expect = 1e-06 Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 5/89 (5%) Frame = -2 Query: 253 NIIIAKELFHHMGCHRENKVG--TLKFNIHKADGSTLWNFLSNCLFQLGFNQE---VMMR 89 NI++A EL H+M R + G LK ++ KA W FL + + +LGFNQE ++M+ Sbjct: 427 NILVAYELTHYMRQKRNGETGYAALKLDMSKAYDRVEWGFLKDMMLKLGFNQEWTQLIMK 486 Query: 88 CVPTVTGRVWIYRFLIGLITSNRGLRQGD 2 C+ VT R+ + LI +I RGL+Q D Sbjct: 487 CITFVTYRIRVNGELIEVIQPERGLQQRD 515 >gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group] Length = 1594 Score = 58.2 bits (139), Expect = 5e-06 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 5/89 (5%) Frame = -2 Query: 253 NIIIAKELFHHMGCHRENKVG--TLKFNIHKADGSTLWNFLSNCLFQLGFNQE---VMMR 89 NI+IA E+ H+M R +VG K ++ KA W+FL + + +LGF+ + ++M+ Sbjct: 778 NILIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMK 837 Query: 88 CVPTVTGRVWIYRFLIGLITSNRGLRQGD 2 CV TVT R+ + L + RGLRQGD Sbjct: 838 CVSTVTYRIRVNGELSESFSPERGLRQGD 866 >gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1621 Score = 58.2 bits (139), Expect = 5e-06 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 5/89 (5%) Frame = -2 Query: 253 NIIIAKELFHHMGCHRENKVG--TLKFNIHKADGSTLWNFLSNCLFQLGFNQE---VMMR 89 NI+IA E+ H+M R +VG K ++ KA W+FL + + +LGF+ + ++M+ Sbjct: 805 NILIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMK 864 Query: 88 CVPTVTGRVWIYRFLIGLITSNRGLRQGD 2 CV TVT R+ + L + RGLRQGD Sbjct: 865 CVSTVTYRIRVNGELSESFSPGRGLRQGD 893 >gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group] gi|222630794|gb|EEE62926.1| hypothetical protein OsJ_17731 [Oryza sativa Japonica Group] Length = 893 Score = 57.8 bits (138), Expect = 6e-06 Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 5/89 (5%) Frame = -2 Query: 253 NIIIAKELFHHMGCHRENKVG--TLKFNIHKADGSTLWNFLSNCLFQLGFNQ---EVMMR 89 N+++A E+ H M R + G LK ++ KA W+FL + +LGF + +++MR Sbjct: 224 NVLLAYEMTHFMQTKRTGREGYAALKLDMSKAYDRVEWSFLEKMMVRLGFAEGWVKLIMR 283 Query: 88 CVPTVTGRVWIYRFLIGLITSNRGLRQGD 2 CV TVT R+ + L I +RGLRQGD Sbjct: 284 CVSTVTYRIKVNGDLTDQIIPSRGLRQGD 312 >gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group] Length = 1509 Score = 57.8 bits (138), Expect = 6e-06 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 5/89 (5%) Frame = -2 Query: 253 NIIIAKELFHHMGCHRENKVG--TLKFNIHKADGSTLWNFLSNCLFQLGFNQE---VMMR 89 NI+IA E+ H+M R +VG K ++ KA W+FL + + +LGF+ + ++M+ Sbjct: 750 NILIAYEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMK 809 Query: 88 CVPTVTGRVWIYRFLIGLITSNRGLRQGD 2 CV TVT R+ + L + RGLRQGD Sbjct: 810 CVSTVTYRIRVNGELSESFSPERGLRQGD 838 >gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1505 Score = 57.8 bits (138), Expect = 6e-06 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 5/89 (5%) Frame = -2 Query: 253 NIIIAKELFHHMGCHRENKVG--TLKFNIHKADGSTLWNFLSNCLFQLGFNQE---VMMR 89 NI+IA E+ H+M R +VG K ++ KA W+FL + + +LGF+ + ++M+ Sbjct: 746 NILIAYEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMK 805 Query: 88 CVPTVTGRVWIYRFLIGLITSNRGLRQGD 2 CV TVT R+ + L + RGLRQGD Sbjct: 806 CVSTVTYRIRVNGELSESFSPERGLRQGD 834