BLASTX nr result
ID: Cinnamomum23_contig00042672
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00042672
(1019 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABJ96383.1| hypothetical protein [Prunus persica] 104 7e-35
ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643... 105 6e-32
emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera] 100 3e-31
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 100 1e-30
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 95 1e-30
emb|CAN76078.1| hypothetical protein VITISV_008973 [Vitis vinifera] 96 2e-29
ref|XP_008376990.1| PREDICTED: uncharacterized protein LOC103440... 89 3e-29
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera] 96 3e-29
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 92 2e-28
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 98 2e-28
ref|XP_012700051.1| PREDICTED: uncharacterized protein LOC105914... 91 3e-28
ref|XP_012700229.1| PREDICTED: uncharacterized protein LOC105914... 90 4e-28
gb|AAB82754.1| retrofit [Oryza longistaminata] 97 7e-28
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 90 7e-28
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 89 7e-28
emb|CAN64170.1| hypothetical protein VITISV_029600 [Vitis vinifera] 85 7e-28
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 87 9e-28
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 93 9e-28
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 90 9e-28
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi... 90 9e-28
>gb|ABJ96383.1| hypothetical protein [Prunus persica]
Length = 193
Score = 104 bits (260), Expect(3) = 7e-35
Identities = 46/72 (63%), Positives = 58/72 (80%)
Frame = +2
Query: 2 LHGYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCEL 181
+ + D+DWA CPDDR+ST G+A+YL CNL+S S+KKQ TVARSSTEAEYR + S E+
Sbjct: 37 IQAFCDADWAGCPDDRRSTGGFAIYLGCNLVSWSAKKQHTVARSSTEAEYRAIANTSTEI 96
Query: 182 VWLQSLLRELGF 217
WL+SLL+ELGF
Sbjct: 97 TWLRSLLQELGF 108
Score = 64.7 bits (156), Expect(3) = 7e-35
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSSSRFASV 441
FH RTKHVE+D F+ D V+ +L V +IST+DQ+AD+ TKPLSS RF +
Sbjct: 132 FHARTKHVEIDYHFVRDQVSAGKLSVQFISTKDQLADIMTKPLSSPRFTFI 182
Score = 27.3 bits (59), Expect(3) = 7e-35
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3
Query: 234 PTVWCDNLGAT 266
P +WCDNLGAT
Sbjct: 114 PVLWCDNLGAT 124
>ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643719 [Jatropha curcas]
Length = 1003
Score = 105 bits (261), Expect(2) = 6e-32
Identities = 56/97 (57%), Positives = 67/97 (69%), Gaps = 6/97 (6%)
Frame = +2
Query: 2 LHGYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCEL 181
L ++DSDWA CPDDRKSTSGYA+YL NLIS SSKKQ+TVARSSTE+EYR + + E+
Sbjct: 846 LQCFSDSDWAGCPDDRKSTSGYAIYLGNNLISWSSKKQSTVARSSTESEYRSIAHATSEI 905
Query: 182 VWLQSLLRELGFKFV*ATYSLV**SWC------YLTS 274
+W+ SLL ELG + AT WC YLTS
Sbjct: 906 MWILSLLSELGVSVLPATL------WCDNIGAIYLTS 936
Score = 61.2 bits (147), Expect(2) = 6e-32
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSSSRF 432
FH RTKH+E+DV F+ D V K++ + +IS QDQIAD+ TKPL S F
Sbjct: 940 FHARTKHIELDVHFVRDQVQHKKIQIKFISGQDQIADIMTKPLGSRLF 987
>emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]
Length = 1394
Score = 100 bits (248), Expect(3) = 3e-31
Identities = 46/70 (65%), Positives = 58/70 (82%)
Frame = +2
Query: 2 LHGYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCEL 181
L GY+D+DWASCPDDR+STSGY V+L NLIS SS KQ V++SS E+EYRG+ ++ EL
Sbjct: 1106 LQGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAEL 1165
Query: 182 VWLQSLLREL 211
VW+QSLL+EL
Sbjct: 1166 VWIQSLLQEL 1175
Score = 60.8 bits (146), Expect(3) = 3e-31
Identities = 26/61 (42%), Positives = 45/61 (73%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSSSRFASVHIPSSLSLT 468
FH R+KH+E+D+ FI + V +++L +CY+ + DQ+AD+ TK LS S+F ++ S L++T
Sbjct: 1200 FHSRSKHIELDLHFIREKVLRQELQICYVPSTDQLADILTKHLSISQFCTLR--SKLTVT 1257
Query: 469 N 471
+
Sbjct: 1258 S 1258
Score = 23.5 bits (49), Expect(3) = 3e-31
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 231 PPTVWCDNLGA 263
PP +WCDN A
Sbjct: 1181 PPVLWCDNQSA 1191
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 99.8 bits (247), Expect(3) = 1e-30
Identities = 45/73 (61%), Positives = 59/73 (80%)
Frame = +2
Query: 2 LHGYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCEL 181
L ++D+DWA CPDDRKST GYA++L NLIS +SKKQ+TV+RSSTEAEY+ + + E+
Sbjct: 1279 LSAFSDADWAGCPDDRKSTGGYALFLGPNLISWNSKKQSTVSRSSTEAEYKAMANATAEV 1338
Query: 182 VWLQSLLRELGFK 220
+WLQSLL ELG +
Sbjct: 1339 IWLQSLLHELGIR 1351
Score = 55.8 bits (133), Expect(3) = 1e-30
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSSSR 429
F+ RTKH+EVD F+ D V K+LD+ IST DQ+AD FTK L+ R
Sbjct: 1374 FNARTKHIEVDFHFVRDRVLSKKLDIRLISTNDQVADGFTKALTIGR 1420
Score = 26.9 bits (58), Expect(3) = 1e-30
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3
Query: 234 PTVWCDNLGAT 266
P +WCDNLGAT
Sbjct: 1356 PRLWCDNLGAT 1366
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 95.1 bits (235), Expect(3) = 1e-30
Identities = 40/70 (57%), Positives = 55/70 (78%)
Frame = +2
Query: 2 LHGYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCEL 181
+HGYTD+DWASCPDDR+ST GY ++L NL+S SS KQ V+RSS E+EYR + + E+
Sbjct: 1064 IHGYTDADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVSRSSAESEYRALASATSEM 1123
Query: 182 VWLQSLLREL 211
+W+Q +L+EL
Sbjct: 1124 IWIQYVLQEL 1133
Score = 63.9 bits (154), Expect(3) = 1e-30
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSSSRFASVH-----IPS 453
FH RTKH+E+D+ FI D V +KQL + Y+ + +Q+AD+FTK +SSS+F S +PS
Sbjct: 1159 FHARTKHIEMDLHFIRDHVLRKQLVIQYLPSAEQVADIFTKHISSSQFLSFRTKLSVVPS 1218
Query: 454 SLSL 465
+SL
Sbjct: 1219 PVSL 1222
Score = 23.1 bits (48), Expect(3) = 1e-30
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 231 PPTVWCDNLGA 263
PP +WCDN A
Sbjct: 1140 PPLLWCDNKSA 1150
>emb|CAN76078.1| hypothetical protein VITISV_008973 [Vitis vinifera]
Length = 1146
Score = 95.5 bits (236), Expect(3) = 2e-29
Identities = 44/70 (62%), Positives = 58/70 (82%)
Frame = +2
Query: 2 LHGYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCEL 181
L GY+D+DWASCP+DR+ST+GY V+L NLIS SS KQ V++SST +EYRG+ ++ EL
Sbjct: 986 LQGYSDADWASCPNDRRSTNGYCVFLASNLISWSSSKQRLVSKSSTVSEYRGLVSLTAEL 1045
Query: 182 VWLQSLLREL 211
VW+QSLL+EL
Sbjct: 1046 VWIQSLLQEL 1055
Score = 60.1 bits (144), Expect(3) = 2e-29
Identities = 25/60 (41%), Positives = 44/60 (73%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSSSRFASVHIPSSLSLT 468
FH R+KH+E+D+ FI + V +++L +CY+ + DQ+AD+FTK L ++F ++ S L++T
Sbjct: 1080 FHSRSKHIELDLHFIREKVLRQELQICYVPSDDQLADIFTKHLPITQFCNLR--SKLTVT 1137
Score = 22.3 bits (46), Expect(3) = 2e-29
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 231 PPTVWCDN 254
PP +WCDN
Sbjct: 1061 PPILWCDN 1068
>ref|XP_008376990.1| PREDICTED: uncharacterized protein LOC103440084 [Malus domestica]
Length = 1106
Score = 89.4 bits (220), Expect(3) = 3e-29
Identities = 40/71 (56%), Positives = 53/71 (74%)
Frame = +2
Query: 2 LHGYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCEL 181
L Y+D+DWA CP DR+STSGY ++L NLIS S+KKQ TVARSSTEAEYR + + E+
Sbjct: 935 LTAYSDADWAGCPFDRRSTSGYCIFLGSNLISWSAKKQPTVARSSTEAEYRSLAHTAAEI 994
Query: 182 VWLQSLLRELG 214
W+ + ++LG
Sbjct: 995 TWICKVFKDLG 1005
Score = 60.8 bits (146), Expect(3) = 3e-29
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSSSRFASVHIPSSLSL 465
FH RTKH+E+D +I +LV L V Y+ +QDQ+AD+ TK LS SRF +++ S LSL
Sbjct: 1030 FHARTKHIELDYHYIXELVLANLLKVQYVCSQDQLADIHTKSLSKSRF--LYLQSKLSL 1086
Score = 27.3 bits (59), Expect(3) = 3e-29
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 201 FESLASNLYRPPTVWCDNLGA 263
F+ L +L P++WCDNL A
Sbjct: 1001 FKDLGXHLPHVPSLWCDNLSA 1021
>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
Length = 431
Score = 95.9 bits (237), Expect(3) = 3e-29
Identities = 43/70 (61%), Positives = 55/70 (78%)
Frame = +2
Query: 2 LHGYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCEL 181
L YTD+DWASCPDDR+STSGY ++ NL+S S+ KQ V+RSSTE+EYRG+ + EL
Sbjct: 166 LIAYTDADWASCPDDRRSTSGYCIFFGGNLVSWSASKQKVVSRSSTESEYRGLANAAAEL 225
Query: 182 VWLQSLLREL 211
W+QSLL+EL
Sbjct: 226 TWIQSLLKEL 235
Score = 55.8 bits (133), Expect(3) = 3e-29
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = +1
Query: 292 HGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSSSRFASVHIPSSLSL 465
H R KHVE+D F+ + V +K LDV ++ ++DQ+AD+ TK LS+ F +H+ S L++
Sbjct: 262 HSRAKHVEIDYHFVRERVLQKTLDVRFLPSEDQVADILTKSLSTQHF--LHLRSKLTV 317
Score = 25.8 bits (55), Expect(3) = 3e-29
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 222 LYRPPTVWCDNLGAT 266
L++PP ++CDNL T
Sbjct: 239 LFQPPVLYCDNLSTT 253
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 92.0 bits (227), Expect(3) = 2e-28
Identities = 40/69 (57%), Positives = 58/69 (84%)
Frame = +2
Query: 8 GYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCELVW 187
G++D+DWA PDDR+ST G+AV+L NL+S S++KQATV+RSSTEAEY+ + + E++W
Sbjct: 663 GFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMW 722
Query: 188 LQSLLRELG 214
+Q+LL+ELG
Sbjct: 723 VQTLLQELG 731
Score = 59.3 bits (142), Expect(3) = 2e-28
Identities = 25/43 (58%), Positives = 34/43 (79%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPL 417
FH RTKH+EVD F+ + VA+K L++ YIST+DQ+AD FTK +
Sbjct: 756 FHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAI 798
Score = 23.5 bits (49), Expect(3) = 2e-28
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 228 RPPTVWCDNLGA 263
R +WCDNLGA
Sbjct: 736 RAAKLWCDNLGA 747
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 97.8 bits (242), Expect(3) = 2e-28
Identities = 44/71 (61%), Positives = 58/71 (81%)
Frame = +2
Query: 2 LHGYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCEL 181
+HGY+D+DWA DDRKST G+AV+L NL+S S++KQ TV+RSSTEAEY+ V + EL
Sbjct: 1282 VHGYSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAEL 1341
Query: 182 VWLQSLLRELG 214
+W+Q+LLRELG
Sbjct: 1342 IWVQTLLRELG 1352
Score = 53.1 bits (126), Expect(3) = 2e-28
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSSSRFASVHIPSSLSLT 468
FH RTKH+EVD F+ + V++K L++ ++ + DQ+AD FTK LS H +L+LT
Sbjct: 1377 FHARTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALSVRLLE--HFKHNLNLT 1434
Score = 23.5 bits (49), Expect(3) = 2e-28
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3
Query: 240 VWCDNLGA 263
+WCDNLGA
Sbjct: 1361 IWCDNLGA 1368
>ref|XP_012700051.1| PREDICTED: uncharacterized protein LOC105914032 [Setaria italica]
Length = 949
Score = 90.5 bits (223), Expect(3) = 3e-28
Identities = 41/70 (58%), Positives = 56/70 (80%)
Frame = +2
Query: 11 YTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCELVWL 190
++D+DWA C DDRKST G+AV+L NLIS S++KQ TV+RSSTEAEY+ + + E++W+
Sbjct: 791 FSDADWAGCIDDRKSTGGFAVFLGNNLISWSARKQPTVSRSSTEAEYKAIANATTEVMWV 850
Query: 191 QSLLRELGFK 220
Q LLRE+G K
Sbjct: 851 QILLREIGVK 860
Score = 58.2 bits (139), Expect(3) = 3e-28
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPL 417
FH RTKH+EVD F+ D V K+ LD+ ++ST+DQIAD FTK L
Sbjct: 883 FHARTKHIEVDYHFVRDRVKKQLLDIGFVSTKDQIADGFTKAL 925
Score = 25.4 bits (54), Expect(3) = 3e-28
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 228 RPPTVWCDNLGAT 266
R +WCDNLGAT
Sbjct: 863 RAAKLWCDNLGAT 875
>ref|XP_012700229.1| PREDICTED: uncharacterized protein LOC105914105 [Setaria italica]
Length = 834
Score = 90.1 bits (222), Expect(3) = 4e-28
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +2
Query: 11 YTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCELVWL 190
+ D+DWA C DDRKST G+AV+L NLIS S++KQ TV+RSSTEAEY+ + + E++W+
Sbjct: 676 FLDADWAGCIDDRKSTGGFAVFLGNNLISWSARKQPTVSRSSTEAEYKAIANATAEVMWV 735
Query: 191 QSLLRELGFK 220
Q LLRE+G K
Sbjct: 736 QILLREIGVK 745
Score = 58.2 bits (139), Expect(3) = 4e-28
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPL 417
FH RTKH+EVD F+ D V K+ LD+ ++ST+DQIAD FTK L
Sbjct: 768 FHARTKHIEVDYHFVRDRVKKQLLDIGFVSTKDQIADGFTKAL 810
Score = 25.4 bits (54), Expect(3) = 4e-28
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 228 RPPTVWCDNLGAT 266
R +WCDNLGAT
Sbjct: 748 RAAKLWCDNLGAT 760
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 96.7 bits (239), Expect(3) = 7e-28
Identities = 43/73 (58%), Positives = 59/73 (80%)
Frame = +2
Query: 2 LHGYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCEL 181
+HGY+D+DWA DDRKST G+AV+L NL+S S++KQ TV+RSSTEAEY+ V + EL
Sbjct: 1291 VHGYSDADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAEL 1350
Query: 182 VWLQSLLRELGFK 220
+W+Q+LL+ELG +
Sbjct: 1351 IWVQTLLKELGIE 1363
Score = 52.8 bits (125), Expect(3) = 7e-28
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSS 423
FH RTKH+EVD F+ + V++K L++ ++ + DQ+AD FTK LS+
Sbjct: 1386 FHARTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALSA 1430
Score = 23.5 bits (49), Expect(3) = 7e-28
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3
Query: 240 VWCDNLGA 263
+WCDNLGA
Sbjct: 1370 IWCDNLGA 1377
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 89.7 bits (221), Expect(3) = 7e-28
Identities = 39/70 (55%), Positives = 57/70 (81%)
Frame = +2
Query: 11 YTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCELVWL 190
++D+DWA C DDR ST G+AV++ NL+S S++KQATV+RSSTEAEY+ + V+ E++W+
Sbjct: 1279 FSDADWAGCLDDRHSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANVTAEIMWI 1338
Query: 191 QSLLRELGFK 220
Q+LL ELG +
Sbjct: 1339 QTLLHELGIQ 1348
Score = 60.1 bits (144), Expect(3) = 7e-28
Identities = 32/62 (51%), Positives = 42/62 (67%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSSSRFASVHIPSSLSLT 468
FH RTKH+EVD F+ + VA+K L V YIST+DQ+AD FTK LS + ++L+LT
Sbjct: 1371 FHARTKHIEVDYHFVRERVARKFLQVEYISTKDQVADGFTKTLSVRQLEMFR--NNLNLT 1428
Query: 469 NS 474
S
Sbjct: 1429 GS 1430
Score = 23.1 bits (48), Expect(3) = 7e-28
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3
Query: 240 VWCDNLGA 263
VWCDN+GA
Sbjct: 1355 VWCDNIGA 1362
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433472|gb|AAP54977.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1031
Score = 89.4 bits (220), Expect(3) = 7e-28
Identities = 38/70 (54%), Positives = 57/70 (81%)
Frame = +2
Query: 11 YTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCELVWL 190
++D+DWA C DDR+ST G+AV++ NL+S S++KQATV+RSSTEAEY+ + + E++W+
Sbjct: 879 FSDADWAGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWI 938
Query: 191 QSLLRELGFK 220
Q+LL ELG +
Sbjct: 939 QTLLHELGIQ 948
Score = 60.5 bits (145), Expect(3) = 7e-28
Identities = 32/62 (51%), Positives = 42/62 (67%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSSSRFASVHIPSSLSLT 468
FH RTKH+EVD F+ + VA+K L V YIST+DQ+AD FTK LS + ++L+LT
Sbjct: 971 FHARTKHIEVDYHFVRERVARKLLQVEYISTKDQVADGFTKTLSVRQLEMFR--NNLNLT 1028
Query: 469 NS 474
S
Sbjct: 1029 GS 1030
Score = 23.1 bits (48), Expect(3) = 7e-28
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3
Query: 240 VWCDNLGA 263
VWCDN+GA
Sbjct: 955 VWCDNIGA 962
>emb|CAN64170.1| hypothetical protein VITISV_029600 [Vitis vinifera]
Length = 328
Score = 85.1 bits (209), Expect(3) = 7e-28
Identities = 41/75 (54%), Positives = 53/75 (70%)
Frame = +2
Query: 2 LHGYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCEL 181
L YTD+DWAS DD +ST+GY V+L NL++ SS+KQ+ VARSSTE EYR + S E+
Sbjct: 132 LQVYTDTDWASSIDDCRSTTGYCVFLGTNLLTWSSRKQSMVARSSTEVEYRALAHASTEV 191
Query: 182 VWLQSLLRELGFKFV 226
WL+S+ ELG V
Sbjct: 192 AWLRSIFSELGISLV 206
Score = 59.7 bits (143), Expect(3) = 7e-28
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSSSRF 432
FH RTKH+EVDV ++ + V K+L V Y+ + +Q+AD+FTKPLS RF
Sbjct: 227 FHSRTKHIEVDVHYVQEQVLDKKLVVSYVPSVEQVADLFTKPLSIPRF 274
Score = 28.1 bits (61), Expect(3) = 7e-28
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 201 FESLASNLYRPPTVWCDNLGA 263
F L +L P +WCDN GA
Sbjct: 198 FSELGISLVNTPVIWCDNQGA 218
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 87.0 bits (214), Expect(3) = 9e-28
Identities = 39/68 (57%), Positives = 55/68 (80%)
Frame = +2
Query: 11 YTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCELVWL 190
+ D+DWA DDR+ST G+AV+L NL+S S++KQATV+RSSTEAEY+ V + E++W+
Sbjct: 1923 FLDADWAGSIDDRRSTGGFAVFLGSNLVSWSARKQATVSRSSTEAEYKAVANATAEVMWV 1982
Query: 191 QSLLRELG 214
Q+LL+ELG
Sbjct: 1983 QALLKELG 1990
Score = 60.5 bits (145), Expect(3) = 9e-28
Identities = 25/45 (55%), Positives = 36/45 (80%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPLSS 423
FH RTKH+E+D F+ + VA+KQL++ +IS+ DQ+AD FTKPL +
Sbjct: 2015 FHARTKHIEIDYHFVRERVARKQLEIKFISSGDQVADGFTKPLGA 2059
Score = 25.0 bits (53), Expect(3) = 9e-28
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 204 ESLASNLYRPPTVWCDNLGAT 266
+ L N +WCDNLGAT
Sbjct: 1987 KELGINSPETACMWCDNLGAT 2007
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 92.8 bits (229), Expect(3) = 9e-28
Identities = 41/68 (60%), Positives = 57/68 (83%)
Frame = +2
Query: 8 GYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCELVW 187
GY+D+DWA C DDR+ST G+AVYL NL+S ++KKQATV+RSSTEAEY+ + + E++W
Sbjct: 1279 GYSDADWAGCLDDRRSTGGFAVYLGDNLVSWNAKKQATVSRSSTEAEYKALANATAEIMW 1338
Query: 188 LQSLLREL 211
+Q+LL+EL
Sbjct: 1339 VQTLLQEL 1346
Score = 57.8 bits (138), Expect(3) = 9e-28
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPL 417
FH RTKH+EVD F+ + VA+K L V Y+ST DQ+AD FTK L
Sbjct: 1372 FHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQVADGFTKAL 1414
Score = 21.9 bits (45), Expect(3) = 9e-28
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +3
Query: 240 VWCDNLGA 263
+WCDN+GA
Sbjct: 1356 LWCDNMGA 1363
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 89.7 bits (221), Expect(3) = 9e-28
Identities = 39/69 (56%), Positives = 57/69 (82%)
Frame = +2
Query: 8 GYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCELVW 187
G++D+DWA PDDR+ST G+AV+L NL+S S++KQATV+RSS EAEY+ + + E++W
Sbjct: 1241 GFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSIEAEYKALANATAEIMW 1300
Query: 188 LQSLLRELG 214
+Q+LL+ELG
Sbjct: 1301 VQTLLQELG 1309
Score = 59.3 bits (142), Expect(3) = 9e-28
Identities = 25/43 (58%), Positives = 34/43 (79%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPL 417
FH RTKH+EVD F+ + VA+K L++ YIST+DQ+AD FTK +
Sbjct: 1334 FHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAI 1376
Score = 23.5 bits (49), Expect(3) = 9e-28
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 228 RPPTVWCDNLGA 263
R +WCDNLGA
Sbjct: 1314 RAAKLWCDNLGA 1325
>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
Length = 391
Score = 89.7 bits (221), Expect(3) = 9e-28
Identities = 39/69 (56%), Positives = 57/69 (82%)
Frame = +2
Query: 8 GYTDSDWASCPDDRKSTSGYAVYLNCNLISCSSKKQATVARSSTEAEYRGVDIVSCELVW 187
G++D+DWA PDDR+ST G+AV+L NL+S S++KQATV+RSS EAEY+ + + E++W
Sbjct: 233 GFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSIEAEYKALANATAEIMW 292
Query: 188 LQSLLRELG 214
+Q+LL+ELG
Sbjct: 293 VQTLLQELG 301
Score = 59.3 bits (142), Expect(3) = 9e-28
Identities = 25/43 (58%), Positives = 34/43 (79%)
Frame = +1
Query: 289 FHGRTKHVEVDVQFIGDLVAKKQLDVCYISTQDQIADVFTKPL 417
FH RTKH+EVD F+ + VA+K L++ YIST+DQ+AD FTK +
Sbjct: 326 FHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAI 368
Score = 23.5 bits (49), Expect(3) = 9e-28
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 228 RPPTVWCDNLGA 263
R +WCDNLGA
Sbjct: 306 RAAKLWCDNLGA 317