BLASTX nr result

ID: Cinnamomum23_contig00042467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00042467
         (208 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83623.1| hypothetical protein VITISV_010870 [Vitis vinifera]    80   5e-13
ref|XP_011624299.1| PREDICTED: retrovirus-related Pol polyprotei...    78   2e-12
emb|CAN81238.1| hypothetical protein VITISV_031073 [Vitis vinifera]    78   2e-12
emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera]    78   3e-12
emb|CAN70156.1| hypothetical protein VITISV_016168 [Vitis vinifera]    77   4e-12
emb|CAN74421.1| hypothetical protein VITISV_010977 [Vitis vinifera]    76   8e-12
emb|CAN62431.1| hypothetical protein VITISV_015835 [Vitis vinifera]    76   8e-12
gb|ABF95712.1| retrotransposon protein, putative, Ty1-copia subc...    69   9e-10
emb|CDF77009.1| hypothetical transposable element-related protei...    64   4e-08
emb|CAN61645.1| hypothetical protein VITISV_036929 [Vitis vinifera]    55   1e-06
emb|CAN74364.1| hypothetical protein VITISV_002580 [Vitis vinifera]    58   3e-06
emb|CAN61695.1| hypothetical protein VITISV_029441 [Vitis vinifera]    57   5e-06
emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera]    57   5e-06
emb|CAN84004.1| hypothetical protein VITISV_021420 [Vitis vinifera]    56   8e-06

>emb|CAN83623.1| hypothetical protein VITISV_010870 [Vitis vinifera]
          Length = 1601

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 42/65 (64%), Positives = 46/65 (70%)
 Frame = +2

Query: 14  T*GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFRXXXXXXXXXXXXXXFIVPSFRRNLVS 193
           T GCLSY KPSD ER I+VGDG+SVEVEAI HFR              FIVPSFRRNL+S
Sbjct: 616 TLGCLSYRKPSDAERCIYVGDGQSVEVEAIGHFRLLLKSGYFLDLIDTFIVPSFRRNLIS 675

Query: 194 VSLLD 208
           VS+LD
Sbjct: 676 VSVLD 680


>ref|XP_011624299.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94, partial [Amborella trichopoda]
          Length = 747

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 40/63 (63%), Positives = 43/63 (68%)
 Frame = +2

Query: 20  GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFRXXXXXXXXXXXXXXFIVPSFRRNLVSVS 199
           GCLSY KP+D ER I+VGDGKSV VEAI HFR              F+VPSFRRNLVSVS
Sbjct: 302 GCLSYRKPNDAERSIYVGDGKSVNVEAIGHFRLLLSTGYYLDLIDTFVVPSFRRNLVSVS 361

Query: 200 LLD 208
            LD
Sbjct: 362 CLD 364


>emb|CAN81238.1| hypothetical protein VITISV_031073 [Vitis vinifera]
          Length = 1354

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 40/63 (63%), Positives = 45/63 (71%)
 Frame = +2

Query: 20  GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFRXXXXXXXXXXXXXXFIVPSFRRNLVSVS 199
           GCLSY KPSD ER I+VGDG+SVEVEAI HFR              FIVPSFR+NL+SVS
Sbjct: 352 GCLSYRKPSDAERCIYVGDGQSVEVEAIGHFRLLLKSGYFLDLIDTFIVPSFRQNLISVS 411

Query: 200 LLD 208
           +LD
Sbjct: 412 VLD 414


>emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera]
          Length = 1356

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 40/63 (63%), Positives = 44/63 (69%)
 Frame = +2

Query: 20  GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFRXXXXXXXXXXXXXXFIVPSFRRNLVSVS 199
           GCLSY KPSD ER I+VGDG+SVEVEAI HFR              F VPSFRRNL+SVS
Sbjct: 307 GCLSYRKPSDAERCIYVGDGQSVEVEAIGHFRLLLKSGYFLDLIDTFXVPSFRRNLISVS 366

Query: 200 LLD 208
           +LD
Sbjct: 367 VLD 369


>emb|CAN70156.1| hypothetical protein VITISV_016168 [Vitis vinifera]
          Length = 1015

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 39/63 (61%), Positives = 44/63 (69%)
 Frame = +2

Query: 20  GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFRXXXXXXXXXXXXXXFIVPSFRRNLVSVS 199
           GCLSY KPSD ER I+VGDG+SVEV AI HFR              F+VPSFRRNL+SVS
Sbjct: 276 GCLSYRKPSDAERCIYVGDGQSVEVXAIGHFRLLLKSGYFLDLIDTFVVPSFRRNLISVS 335

Query: 200 LLD 208
           +LD
Sbjct: 336 VLD 338


>emb|CAN74421.1| hypothetical protein VITISV_010977 [Vitis vinifera]
          Length = 972

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 39/63 (61%), Positives = 44/63 (69%)
 Frame = +2

Query: 20  GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFRXXXXXXXXXXXXXXFIVPSFRRNLVSVS 199
           GCLSY KPSD ER I+V DG+SVEVEAI HFR              F+VPSFRRNL+SVS
Sbjct: 233 GCLSYRKPSDAERCIYVEDGQSVEVEAIGHFRLLLKSGYFLDLIDTFVVPSFRRNLISVS 292

Query: 200 LLD 208
           +LD
Sbjct: 293 VLD 295


>emb|CAN62431.1| hypothetical protein VITISV_015835 [Vitis vinifera]
          Length = 1217

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 39/63 (61%), Positives = 44/63 (69%)
 Frame = +2

Query: 20  GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFRXXXXXXXXXXXXXXFIVPSFRRNLVSVS 199
           GCLSY KPSD ER I+VGDG+SVEVEAI HFR              F+V SFRRNL+SVS
Sbjct: 308 GCLSYRKPSDAERCIYVGDGQSVEVEAIGHFRLLLKSGYFLDLIDTFVVXSFRRNLISVS 367

Query: 200 LLD 208
           +LD
Sbjct: 368 VLD 370


>gb|ABF95712.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 1057

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 37/63 (58%), Positives = 41/63 (65%)
 Frame = +2

Query: 20  GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFRXXXXXXXXXXXXXXFIVPSFRRNLVSVS 199
           GCL+  KPSDVER IFVGDGK VEVEA+  FR              +IVPSFRRNLVS+ 
Sbjct: 308 GCLNCRKPSDVERFIFVGDGKPVEVEALGTFRLLLKTGYYLDLEETYIVPSFRRNLVSIC 367

Query: 200 LLD 208
            LD
Sbjct: 368 QLD 370


>emb|CDF77009.1| hypothetical transposable element-related protein, partial
           [Boechera divaricarpa]
          Length = 1350

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 32/63 (50%), Positives = 39/63 (61%)
 Frame = +2

Query: 20  GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFRXXXXXXXXXXXXXXFIVPSFRRNLVSVS 199
           GCLSY KP++ ER I+V +G  V+VEAI HFR              F+ PSFRRNL+S S
Sbjct: 306 GCLSYRKPTNAERRIYVANGIPVDVEAIAHFRLFFSTGRFLDLKDTFVAPSFRRNLISGS 365

Query: 200 LLD 208
            LD
Sbjct: 366 YLD 368


>emb|CAN61645.1| hypothetical protein VITISV_036929 [Vitis vinifera]
          Length = 1014

 Score = 55.5 bits (132), Expect(2) = 1e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +2

Query: 20  GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFR 115
           GCLSY KPSD ER I+VGDG+SVEVEAI HFR
Sbjct: 310 GCLSYRKPSDAERCIYVGDGQSVEVEAIGHFR 341



 Score = 23.5 bits (49), Expect(2) = 1e-06
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 109 F*VVIKN*LLFGFIRYFYCTI 171
           F +++K+   FGF RYFY ++
Sbjct: 340 FRLLLKSGYFFGFNRYFYFSV 360


>emb|CAN74364.1| hypothetical protein VITISV_002580 [Vitis vinifera]
          Length = 355

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/63 (47%), Positives = 38/63 (60%)
 Frame = +2

Query: 20  GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFRXXXXXXXXXXXXXXFIVPSFRRNLVSVS 199
           GCL    P+D ER+I+VG+G  V V+AI  FR              F+VPSF+RNL+SVS
Sbjct: 131 GCLKSQMPTDGERYIYVGNGNKVAVKAIGLFRLQLDSGCTLDLEETFVVPSFKRNLISVS 190

Query: 200 LLD 208
            LD
Sbjct: 191 CLD 193


>emb|CAN61695.1| hypothetical protein VITISV_029441 [Vitis vinifera]
          Length = 1581

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/63 (47%), Positives = 37/63 (58%)
 Frame = +2

Query: 20  GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFRXXXXXXXXXXXXXXFIVPSFRRNLVSVS 199
           GCL    P+D ER+I+VG+G    V+AI  FR              F+VPSFRRNL+SVS
Sbjct: 720 GCLRSRMPTDGERYIYVGNGNKAAVKAIGLFRLQLDSGCTLDLEETFVVPSFRRNLISVS 779

Query: 200 LLD 208
            LD
Sbjct: 780 CLD 782


>emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera]
          Length = 1181

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/63 (47%), Positives = 37/63 (58%)
 Frame = +2

Query: 20  GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFRXXXXXXXXXXXXXXFIVPSFRRNLVSVS 199
           GCL    P+D ER+I+VG+G    V+AI  FR              F+VPSFRRNL+SVS
Sbjct: 167 GCLRSRMPTDGERYIYVGNGNKAAVKAIGLFRLQLDSGCTLDLEETFVVPSFRRNLISVS 226

Query: 200 LLD 208
            LD
Sbjct: 227 CLD 229


>emb|CAN84004.1| hypothetical protein VITISV_021420 [Vitis vinifera]
          Length = 532

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 30/63 (47%), Positives = 37/63 (58%)
 Frame = +2

Query: 20  GCLSY*KPSDVERHIFVGDGKSVEVEAIRHFRXXXXXXXXXXXXXXFIVPSFRRNLVSVS 199
           GCL    P+D ER+I+VG+G  V V+AI  FR              F+VPSFRRNL+ VS
Sbjct: 324 GCLRSRMPTDGERYIYVGNGNKVAVKAIGLFRLQLDSGCTLDLEETFVVPSFRRNLIYVS 383

Query: 200 LLD 208
            LD
Sbjct: 384 CLD 386


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