BLASTX nr result

ID: Cinnamomum23_contig00042348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00042348
         (322 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009624762.1| PREDICTED: DNA polymerase beta isoform X5 [N...    59   1e-06
ref|XP_009624761.1| PREDICTED: DNA polymerase beta isoform X4 [N...    59   1e-06
ref|XP_009624760.1| PREDICTED: DNA polymerase beta isoform X3 [N...    59   1e-06
ref|XP_009624757.1| PREDICTED: DNA polymerase beta isoform X1 [N...    59   1e-06
ref|XP_009624758.1| PREDICTED: DNA polymerase beta isoform X2 [N...    58   3e-06
emb|CBI32097.3| unnamed protein product [Vitis vinifera]               57   6e-06
ref|XP_009788807.1| PREDICTED: DNA polymerase beta isoform X3 [N...    56   8e-06

>ref|XP_009624762.1| PREDICTED: DNA polymerase beta isoform X5 [Nicotiana
           tomentosiformis]
          Length = 458

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -1

Query: 112 YSNLVGTSQSLLLYNAPDLNRNITEIFGKLINIYRAL 2
           ++N VGTS S  LY  PDLNRNITEIFGKLINIYRAL
Sbjct: 188 HNNPVGTSDSSSLYKPPDLNRNITEIFGKLINIYRAL 224


>ref|XP_009624761.1| PREDICTED: DNA polymerase beta isoform X4 [Nicotiana
           tomentosiformis]
          Length = 500

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -1

Query: 112 YSNLVGTSQSLLLYNAPDLNRNITEIFGKLINIYRAL 2
           ++N VGTS S  LY  PDLNRNITEIFGKLINIYRAL
Sbjct: 188 HNNPVGTSDSSSLYKPPDLNRNITEIFGKLINIYRAL 224


>ref|XP_009624760.1| PREDICTED: DNA polymerase beta isoform X3 [Nicotiana
           tomentosiformis]
          Length = 504

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -1

Query: 112 YSNLVGTSQSLLLYNAPDLNRNITEIFGKLINIYRAL 2
           ++N VGTS S  LY  PDLNRNITEIFGKLINIYRAL
Sbjct: 158 HNNPVGTSDSSSLYKPPDLNRNITEIFGKLINIYRAL 194


>ref|XP_009624757.1| PREDICTED: DNA polymerase beta isoform X1 [Nicotiana
           tomentosiformis]
          Length = 534

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -1

Query: 112 YSNLVGTSQSLLLYNAPDLNRNITEIFGKLINIYRAL 2
           ++N VGTS S  LY  PDLNRNITEIFGKLINIYRAL
Sbjct: 188 HNNPVGTSDSSSLYKPPDLNRNITEIFGKLINIYRAL 224


>ref|XP_009624758.1| PREDICTED: DNA polymerase beta isoform X2 [Nicotiana
           tomentosiformis]
          Length = 526

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 29/36 (80%), Positives = 30/36 (83%)
 Frame = -1

Query: 109 SNLVGTSQSLLLYNAPDLNRNITEIFGKLINIYRAL 2
           S+ VGTS S  LY  PDLNRNITEIFGKLINIYRAL
Sbjct: 181 SSEVGTSDSSSLYKPPDLNRNITEIFGKLINIYRAL 216


>emb|CBI32097.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = -1

Query: 121 FALYSNLVGTSQSLLLYNAPDLNRNITEIFGKLINIYRAL 2
           F +  N VGT  S L Y+ PDLN+NITEIFGKLINIYRAL
Sbjct: 197 FTISFNQVGTLDSSLPYSPPDLNKNITEIFGKLINIYRAL 236


>ref|XP_009788807.1| PREDICTED: DNA polymerase beta isoform X3 [Nicotiana sylvestris]
          Length = 527

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 103 LVGTSQSLLLYNAPDLNRNITEIFGKLINIYRAL 2
           +VGTS S  LY  PDLNRNIT+IFGKLINIYRAL
Sbjct: 184 VVGTSDSSSLYKPPDLNRNITQIFGKLINIYRAL 217


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