BLASTX nr result

ID: Cinnamomum23_contig00042298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00042298
         (518 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007910655.1| PREDICTED: LOW QUALITY PROTEIN: vegetative c...    57   6e-06

>ref|XP_007910655.1| PREDICTED: LOW QUALITY PROTEIN: vegetative cell wall protein
           gp1-like, partial [Callorhinchus milii]
          Length = 454

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
 Frame = +1

Query: 1   PKTQTQSLPNPTSPCSLSFSHPSTTPANKILNPNRLIRKKKIQHPIHPKNPNTQPQPILN 180
           P+ Q QS P P    + S  H S+   +   NP+        Q P    NP+T P PI N
Sbjct: 59  PQPQPQSQPQPKHNPNPSPKHSSSPKPSPKPNPS--------QKPSPKTNPSTNPSPIPN 110

Query: 181 --PKP*ILSNPRPK-NPK-IRTPVSSPAAEPSTSISDKPYPFKSQLLPGQLHCPTNHPSV 348
             P+P   +NP PK NP  I +P  +P+ +P T    KP P  +   P     P  +P  
Sbjct: 111 TSPQPYTSTNPSPKPNPSPIPSPKPNPSPKPQTQPRPKPSPSTN---PSTKFKPNPYPKP 167

Query: 349 SLSKPHLEIQHTIPPLIFLYPNPHNNNYIKVDRSRERALATLHRHLASPQSS 504
           + S P L       P     PNP++N  +      + +  T  +H  SP+ S
Sbjct: 168 NPS-PKLNPSPKPSPKHNPSPNPNHNTNLNPSPKPKPSPKTKPKHNPSPKPS 218


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