BLASTX nr result

ID: Cinnamomum23_contig00041297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00041297
         (296 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]    72   9e-21
ref|XP_010108229.1| 30S ribosomal protein S12-B [Morus notabilis...    74   5e-11

>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score = 72.0 bits (175), Expect(2) = 9e-21
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +3

Query: 183 KCFLDPHPRFPRGGRAVFPKRPASGGRKRTRVGSARFA 296
           +  + PHPRFPRGGRAVFP+RPASGGRKRTRVGSARFA
Sbjct: 426 RVLVGPHPRFPRGGRAVFPQRPASGGRKRTRVGSARFA 463



 Score = 54.7 bits (130), Expect(2) = 9e-21
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +1

Query: 64  SPPLGFCFPYLRAHCVSTGEKEVGFT 141
           SPPLGF FPYLRAHCVSTGEKEV FT
Sbjct: 394 SPPLGFFFPYLRAHCVSTGEKEVDFT 419


>ref|XP_010108229.1| 30S ribosomal protein S12-B [Morus notabilis]
           gi|587931382|gb|EXC18469.1| 30S ribosomal protein S12-B
           [Morus notabilis]
          Length = 158

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = +3

Query: 186 CFLDPHPRFPRGGRAVFPKRPASGGRKRTRVGSARFA 296
           C LD HPRFPRGGRAV P+RPASGGRKRTRVGSARFA
Sbjct: 114 CLLDSHPRFPRGGRAVIPQRPASGGRKRTRVGSARFA 150


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