BLASTX nr result

ID: Cinnamomum23_contig00040770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00040770
         (228 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007200213.1| hypothetical protein PRUPE_ppa015697mg [Prun...    46   1e-08
ref|XP_007027874.1| DNA/RNA polymerases superfamily protein [The...    44   5e-06
ref|XP_007049887.1| DNA/RNA polymerases superfamily protein [The...    44   5e-06

>ref|XP_007200213.1| hypothetical protein PRUPE_ppa015697mg [Prunus persica]
           gi|462395613|gb|EMJ01412.1| hypothetical protein
           PRUPE_ppa015697mg [Prunus persica]
          Length = 983

 Score = 45.8 bits (107), Expect(2) = 1e-08
 Identities = 19/37 (51%), Positives = 28/37 (75%)
 Frame = +3

Query: 36  VEDEEKEFAQPVFDDSGEDDQEVDVLPVEGESLVVRR 146
           V  E  +F +P +DD G +++ +++LPVEGESLVVRR
Sbjct: 166 VRSEVTDFPEPTYDDFGNEEEVINLLPVEGESLVVRR 202



 Score = 39.7 bits (91), Expect(2) = 1e-08
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +1

Query: 148 MIVPKVEDNEDWRRYNIFRTCVFCNGK 228
           M  PKVE+ EDWR +NIFRT V C GK
Sbjct: 204 MTTPKVEE-EDWRHHNIFRTRVLCGGK 229


>ref|XP_007027874.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
           gi|508716479|gb|EOY08376.1| DNA/RNA polymerases
           superfamily protein [Theobroma cacao]
          Length = 558

 Score = 43.9 bits (102), Expect(2) = 5e-06
 Identities = 21/45 (46%), Positives = 33/45 (73%)
 Frame = +3

Query: 12  KKRVNLIDVEDEEKEFAQPVFDDSGEDDQEVDVLPVEGESLVVRR 146
           ++RVNL ++ +E     +PV+D+  E+ +E+DV P +GESLVVRR
Sbjct: 272 QRRVNLAELGEE----LEPVYDEYEEEVEEIDVYPAQGESLVVRR 312



 Score = 32.7 bits (73), Expect(2) = 5e-06
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +1

Query: 166 EDNEDWRRYNIFRTCVFCNGK 228
           E+ EDW+R +IFRT V C GK
Sbjct: 320 EEAEDWKRRSIFRTRVVCEGK 340


>ref|XP_007049887.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
           gi|508702148|gb|EOX94044.1| DNA/RNA polymerases
           superfamily protein [Theobroma cacao]
          Length = 546

 Score = 43.9 bits (102), Expect(2) = 5e-06
 Identities = 21/45 (46%), Positives = 33/45 (73%)
 Frame = +3

Query: 12  KKRVNLIDVEDEEKEFAQPVFDDSGEDDQEVDVLPVEGESLVVRR 146
           ++RVNL ++ +E     +PV+D+  E+ +E+DV P +GESLVVRR
Sbjct: 276 QRRVNLAELGEE----LEPVYDEYEEEVEEIDVYPAQGESLVVRR 316



 Score = 32.7 bits (73), Expect(2) = 5e-06
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +1

Query: 166 EDNEDWRRYNIFRTCVFCNGK 228
           E+ EDW+R +IFRT V C GK
Sbjct: 324 EEAEDWKRRSIFRTRVVCEGK 344