BLASTX nr result

ID: Cinnamomum23_contig00040588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00040588
         (298 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    67   5e-09
ref|XP_008242555.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    58   3e-06
ref|XP_007204494.1| hypothetical protein PRUPE_ppa019638mg [Prun...    58   3e-06
ref|XP_007152896.1| hypothetical protein PHAVU_004G169200g [Phas...    57   5e-06

>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
 Frame = -2

Query: 276 IEDGSFSPVFRDEIVRNKLDGSKVTGIKRNGSISD--IPSTSNTDYAANSSNSSKFMVPS 103
           IED     + ++EI R ++  S+V+ I  +  +S   +PSTS T+  ANS ++S+F+ P+
Sbjct: 296 IEDWEVMKI-KEEIERKRIFESRVSRINHSNPVSSSGLPSTSKTE--ANSGHASRFLHPT 352

Query: 102 GKRSMSEITNISRFIDFGGRSRIKDSSTGENGAK 1
            KRSMSEIT  SR+ DF  ++RI++SS  +N  K
Sbjct: 353 EKRSMSEITACSRYADFSTKNRIRESSLAQNNIK 386


>ref|XP_008242555.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Prunus mume]
          Length = 447

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/82 (40%), Positives = 50/82 (60%)
 Frame = -2

Query: 246 RDEIVRNKLDGSKVTGIKRNGSISDIPSTSNTDYAANSSNSSKFMVPSGKRSMSEITNIS 67
           R+E+   +L  +KV+ + +N S S     S +DY A S+++S+ M    KRSMSEIT +S
Sbjct: 334 REEMEMKRLFETKVSTMNKNASASSPTFPSTSDYIATSAHASRSMNQGEKRSMSEITALS 393

Query: 66  RFIDFGGRSRIKDSSTGENGAK 1
           RF + G ++R K+ S  EN  K
Sbjct: 394 RFGNLGFKNRNKEPSLLENNVK 415


>ref|XP_007204494.1| hypothetical protein PRUPE_ppa019638mg [Prunus persica]
           gi|462400025|gb|EMJ05693.1| hypothetical protein
           PRUPE_ppa019638mg [Prunus persica]
          Length = 418

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/82 (40%), Positives = 50/82 (60%)
 Frame = -2

Query: 246 RDEIVRNKLDGSKVTGIKRNGSISDIPSTSNTDYAANSSNSSKFMVPSGKRSMSEITNIS 67
           R+E+   +L  +KV+ + +N S S     S +DY A S+++S+ M    KRSMSEIT +S
Sbjct: 305 REEMEMKRLFENKVSTMNKNASASSPTFPSTSDYIATSAHASRSMNQGEKRSMSEITALS 364

Query: 66  RFIDFGGRSRIKDSSTGENGAK 1
           RF + G ++R K+ S  EN  K
Sbjct: 365 RFGNLGFKNRNKEPSLLENNVK 386


>ref|XP_007152896.1| hypothetical protein PHAVU_004G169200g [Phaseolus vulgaris]
           gi|561026205|gb|ESW24890.1| hypothetical protein
           PHAVU_004G169200g [Phaseolus vulgaris]
          Length = 426

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = -2

Query: 246 RDEIVRNKLDGSKVTGIKRNGSISDIPSTSNTDYAANSSNSSKFMVPSGKRSMSEITNIS 67
           ++E+ R     SKV+ +    S+S+      +D A NSS++ K++ P  KRS+SEIT +S
Sbjct: 306 KEEMERKISFESKVSALNNIKSVSEKDPPFTSDSAGNSSHAPKYVNPGEKRSISEITGVS 365

Query: 66  RFIDFGGRSRI-KDSSTGENGAK 1
           RF D G + R+ KDSS+ +N  K
Sbjct: 366 RFGDLGMKMRVFKDSSSVQNNLK 388


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