BLASTX nr result
ID: Cinnamomum23_contig00039896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00039896
(1700 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 118 9e-68
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 118 3e-65
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 108 5e-57
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 94 7e-56
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 94 8e-56
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 97 2e-55
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 99 5e-55
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 93 2e-54
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 91 5e-54
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 94 5e-54
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 94 5e-54
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 95 1e-53
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 95 1e-53
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 95 2e-53
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 95 2e-53
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 91 1e-52
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc... 90 3e-52
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 92 3e-52
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 92 3e-52
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 91 3e-51
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 118 bits (296), Expect(3) = 9e-68
Identities = 50/69 (72%), Positives = 61/69 (88%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW G P++Y+ L+IFGCPAYAHV+DGKLEPRA KCIFL YA GVKGYRLWC ++++P+FI
Sbjct: 747 VWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFI 806
Query: 1537 ISRDGTFDD 1563
ISRD TFD+
Sbjct: 807 ISRDVTFDE 815
Score = 101 bits (251), Expect(3) = 9e-68
Identities = 49/83 (59%), Positives = 62/83 (74%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F+ F EGIVRHR V++TPQ NG+AERMN+T +R +CM + GLSKKF AE VN A Y
Sbjct: 670 FDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAY 729
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
L+NR PSTAI+ KTP++V+ P
Sbjct: 730 LVNRSPSTAIDFKTPQEVWSGKP 752
Score = 88.6 bits (218), Expect(3) = 9e-68
Identities = 63/179 (35%), Positives = 84/179 (46%), Gaps = 20/179 (11%)
Frame = +3
Query: 639 KNLISLGTLDSNGCNYKVGGAVMRISMVLLW**RYR------SIMAFSFFKVAQLQVLL- 797
KNLIS+GTLD NG + G V+R+S L + R ++M S A + +
Sbjct: 488 KNLISVGTLDKNGYTFSGSGGVLRVSKGALVVMKGRLQHGIYTLMGSSVLGTAAVSSSMA 547
Query: 798 ------------LCHPQIHIWILPNYGIYNLVI*VGGWMTR-VQNSSLSDRXXXXXXXXX 938
L H ++ I + +G T V SD
Sbjct: 548 IDSVEKKDNCTELWHRRLGHMSEKGLSILEVKFSMGSHTTNGVLEYIHSDLWGPSPVESH 607
Query: 939 XXXXYMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
Y +TF DD+SRKVW+Y LK K E F +FK+ K M+EK+ GK +K LRTDNGLEFC
Sbjct: 608 SGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFC 666
Score = 63.2 bits (152), Expect = 6e-07
Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 7/57 (12%)
Frame = +1
Query: 1546 DGTF-------DDILIAAKDMSKINRLKAKLNGEFEMKDLGAAKKILEMEIRRERKA 1695
DG+F DD+LIAAK+ ++IN+LK L+ EFEMKDLGAAKKIL MEI R+R A
Sbjct: 1103 DGSFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEFEMKDLGAAKKILGMEIWRDRDA 1159
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 118 bits (296), Expect(3) = 3e-65
Identities = 50/69 (72%), Positives = 61/69 (88%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW G P++Y+ L+IFGCPAYAHV+DGKLEPRA KCIFL YA GVKGYRLWC ++++P+FI
Sbjct: 960 VWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFI 1019
Query: 1537 ISRDGTFDD 1563
ISRD TFD+
Sbjct: 1020 ISRDVTFDE 1028
Score = 101 bits (251), Expect(3) = 3e-65
Identities = 49/83 (59%), Positives = 62/83 (74%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F+ F EGIVRHR V++TPQ NG+AERMN+T +R +CM + GLSKKF AE VN A Y
Sbjct: 883 FDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAY 942
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
L+NR PSTAI+ KTP++V+ P
Sbjct: 943 LVNRSPSTAIDFKTPQEVWSGKP 965
Score = 80.1 bits (196), Expect(3) = 3e-65
Identities = 35/55 (63%), Positives = 43/55 (78%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
Y +TF DD+SRKVW+Y LK K E F +FK+ K M+EK+ GK +K LRTDNGLEFC
Sbjct: 825 YYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFC 879
Score = 65.5 bits (158), Expect = 1e-07
Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 7/58 (12%)
Frame = +1
Query: 1546 DGTF-------DDILIAAKDMSKINRLKAKLNGEFEMKDLGAAKKILEMEIRRERKAG 1698
DG+F DD+LIAAK+ ++IN+LK L+ EFEMKDLGAAKKIL MEI R+R AG
Sbjct: 1304 DGSFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEFEMKDLGAAKKILGMEIWRDRDAG 1361
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 108 bits (271), Expect(3) = 5e-57
Identities = 50/86 (58%), Positives = 63/86 (73%)
Frame = +2
Query: 1103 LGILWGAFNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AE 1282
L W F+ F +EGI RHR V+NTPQ NG+AERMN+T ER +CMLSN GL ++F AE
Sbjct: 542 LEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAE 601
Query: 1283 TVNKACYLINRFPSTAIECKTPEKVY 1360
V+ ACYLINR P T I+CKTP +++
Sbjct: 602 AVSTACYLINRGPHTGIQCKTPMEMW 627
Score = 84.7 bits (208), Expect(3) = 5e-57
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
+W G DY+NL+ FGC AY HV++GKLEPRA+K +F+ Y DGVKG+R+W EK R I
Sbjct: 626 MWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEK--RVI 683
Query: 1537 ISRDGTFDD 1563
+SR+ FD+
Sbjct: 684 MSRNVVFDE 692
Score = 78.6 bits (192), Expect(3) = 5e-57
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
+ ++ DDYSR W+Y++KHK EAF +FK+ K ++E Q GK+IKRLRTDNGLEFC
Sbjct: 491 FFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFC 545
Score = 62.0 bits (149), Expect(2) = 1e-13
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Frame = +2
Query: 467 ICLNRDWFTTYQFIDDGNVLMGNNVACKVVRISSIRIKMCNGIVRTLSGVKHV------L 628
IC R+WFTTY+ +D G++ M N+ CKVV SI+I+ +G TL+ V+HV L
Sbjct: 289 ICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNL 348
Query: 629 EF*QKPDFLGYT*L*WL----*LQSWRCGYENLHGALVVMKV*KHNGL*FLQGXXXXXXX 796
D G++ W L+ W+ G+ +++K L FLQG
Sbjct: 349 ISLSLLDSKGFS---WSGKDGVLRVWK-------GSNLILKGVMRGTLYFLQGSTVTGSA 398
Query: 797 XXXXXXXY-LDTTKLWHIQLSHI 862
+ D TKLWHI+L H+
Sbjct: 399 HVASSEFHQKDMTKLWHIRLGHM 421
Score = 43.5 bits (101), Expect(2) = 1e-13
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 6/164 (3%)
Frame = +1
Query: 10 LLCSKPSS*EHSVDTMMYGTKTLFMEDVMAALNSKELKKKVAAENNNDSSSGGLVAHGRI 189
LL S P S E+ V + + G T+ +E+V +AL+S+EL+ K + + SG + +
Sbjct: 145 LLVSLPMSFENFVQSFIVGKDTVSLEEVRSALHSRELRHKANGTSTDIQPSGLFTSSRKG 204
Query: 190 EKNGPNRRAQFXXXXXXXXXTVFPLSQGMAF*KRLFRA*RERGKPQI----LEMYKTSNS 357
KNG + P+S+G A + +E+G + + S
Sbjct: 205 RKNGGKKNK--------------PMSKG-AKPDDVCNYCKEKGHWKFDCPKKKKQSEKQS 249
Query: 358 INVAGVAKDNSDGVDALLVTVGSSRAE--WMLDSGCFYHMS*QR 483
++ A +D + D LV + W+LDSG YH+ +R
Sbjct: 250 VSAAVAEEDTNSEEDIALVADEHTHHSDVWVLDSGASYHICPRR 293
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 94.0 bits (232), Expect(3) = 7e-56
Identities = 46/83 (55%), Positives = 59/83 (71%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGIVRH V +TPQ NG+AERMN+T + +C+LSN GL K+F AE V+ ACY
Sbjct: 778 FKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACY 837
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
LINR PS AI+ KTP +V+ P
Sbjct: 838 LINRSPSYAIDKKTPIEVWSGSP 860
Score = 94.0 bits (232), Expect(3) = 7e-56
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW GSP +Y++LR+FGC AYAHV++GKLEPRA KCIFL Y GVKGY+LWC + K + +
Sbjct: 855 VWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVV 912
Query: 1537 ISRDGTFDD 1563
ISR+ F +
Sbjct: 913 ISRNVVFHE 921
Score = 80.5 bits (197), Expect(3) = 7e-56
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YM+T DDYSRKVW Y LKHK++AF FK+ K M+E+Q +++K LRTDNG+EFC
Sbjct: 720 YMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFC 774
Score = 65.1 bits (157), Expect(2) = 3e-17
Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Frame = +2
Query: 467 ICLNRDWFTTYQFIDDGNVLMGNNVACKVVRISSIRIKMCNGIVRTLSGVKHVLEF*QKP 646
+C NRDWF TY+ + G VLMG++ C+V I +++IKM +G +RTLS V+H+ K
Sbjct: 517 MCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNL--KR 574
Query: 647 DFLGYT*L*WL*LQSWRCGYEN---------LHGALVVMKV-*KHNGL*FLQG-XXXXXX 793
+ L R GY+ G+LVVMK K L L+G
Sbjct: 575 SLISLCTL-------DRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNV 627
Query: 794 XXXXXXXXYLDTTKLWHIQLSHIS 865
D T LWH++L H++
Sbjct: 628 AAVSDSLSNSDATNLWHMRLGHMT 651
Score = 52.8 bits (125), Expect(2) = 3e-17
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Frame = +1
Query: 10 LLCSKPSS*EHSVDTMMYGTKTLFMEDVMAALNSKELKKKVAAENNNDSSSGGLVAHGRI 189
LLCS PSS + DT++Y TL +++V AL+ KE KK+ ++S + GL+ GR
Sbjct: 354 LLCSLPSSYANFRDTILYSRDTLTLKEVYDALHVKEKMKKMVPSEGSNSQAEGLIVWGRQ 413
Query: 190 -EKNGPNRRAQFXXXXXXXXXTVFPLSQGMAF*KR----LFRA*RERGKPQILEMYKTSN 354
EKN N+ + + KR +F + K + Y
Sbjct: 414 QEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKDKRTGKYVPKG 473
Query: 355 SINVAG---VAKDNSDGVDALLVTVGSSRA--EWMLDSGCFYHM 471
G V D + L+ G ++ +W+L++ C YHM
Sbjct: 474 KKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILNTACIYHM 517
Score = 67.0 bits (162), Expect = 4e-08
Identities = 39/77 (50%), Positives = 49/77 (63%)
Frame = +1
Query: 1459 CIFLRYADGVKGYRLWCLDEKSPRFIISRDGTFDDILIAAKDMSKINRLKAKLNGEFEMK 1638
C++L+ DG Y L +D D+LIAAKD S+I +LKA+L+ EFEMK
Sbjct: 1204 CVYLKVVDGSAIYLLLYVD---------------DMLIAAKDKSEIAKLKAQLSSEFEMK 1248
Query: 1639 DLGAAKKILEMEIRRER 1689
DLGAAKKIL MEI R+R
Sbjct: 1249 DLGAAKKILGMEITRKR 1265
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 94.0 bits (232), Expect(3) = 8e-56
Identities = 46/83 (55%), Positives = 59/83 (71%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGIVRH V +TPQ NG+AERMN+T + +C+LSN GL K+F AE V+ ACY
Sbjct: 571 FKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACY 630
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
LINR PS AI+ KTP +V+ P
Sbjct: 631 LINRSPSYAIDKKTPIEVWSGSP 653
Score = 94.0 bits (232), Expect(3) = 8e-56
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW GSP +Y++LR+FGC AYAHV++GKLEPRA KCIFL Y GVKGY+LWC + K + +
Sbjct: 648 VWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVV 705
Query: 1537 ISRDGTFDD 1563
ISR+ F +
Sbjct: 706 ISRNVVFHE 714
Score = 80.5 bits (197), Expect(3) = 8e-56
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YM+T DDYSRKVW Y LKHK++AF FK+ K M+E+Q +++K LRTDNG+EFC
Sbjct: 513 YMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFC 567
Score = 65.1 bits (157), Expect(2) = 3e-17
Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Frame = +2
Query: 467 ICLNRDWFTTYQFIDDGNVLMGNNVACKVVRISSIRIKMCNGIVRTLSGVKHVLEF*QKP 646
+C NRDWF TY+ + G VLMG++ C+V I +++IKM +G +RTLS V+H+ K
Sbjct: 310 MCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNL--KR 367
Query: 647 DFLGYT*L*WL*LQSWRCGYEN---------LHGALVVMKV-*KHNGL*FLQG-XXXXXX 793
+ L R GY+ G+LVVMK K L L+G
Sbjct: 368 SLISLCTL-------DRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNV 420
Query: 794 XXXXXXXXYLDTTKLWHIQLSHIS 865
D T LWH++L H++
Sbjct: 421 AAVSDSLSNSDATNLWHMRLGHMT 444
Score = 52.8 bits (125), Expect(2) = 3e-17
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Frame = +1
Query: 10 LLCSKPSS*EHSVDTMMYGTKTLFMEDVMAALNSKELKKKVAAENNNDSSSGGLVAHGRI 189
LLCS PSS + DT++Y TL +++V AL+ KE KK+ ++S + GL+ GR
Sbjct: 147 LLCSLPSSYANFRDTILYSRDTLTLKEVYDALHVKEKMKKMVPSEGSNSQAEGLIVWGRQ 206
Query: 190 -EKNGPNRRAQFXXXXXXXXXTVFPLSQGMAF*KR----LFRA*RERGKPQILEMYKTSN 354
EKN N+ + + KR +F + K + Y
Sbjct: 207 QEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKDKRTGKYVPKG 266
Query: 355 SINVAG---VAKDNSDGVDALLVTVGSSRA--EWMLDSGCFYHM 471
G V D + L+ G ++ +W+L++ C YHM
Sbjct: 267 KKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILNTACIYHM 310
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 96.7 bits (239), Expect(3) = 2e-55
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGIVRH V +TPQ NG+AERMN+T + +CMLSN GL K+F AE V+ ACY
Sbjct: 532 FKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACY 591
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
LINR PS AI+ KTP KV+ P
Sbjct: 592 LINRSPSYAIDKKTPIKVWSGSP 614
Score = 90.9 bits (224), Expect(3) = 2e-55
Identities = 41/69 (59%), Positives = 53/69 (76%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW GSP +Y++LR+FGC AYAHV++ KLEPRA KCIFL Y GVKGY+LWC + K + +
Sbjct: 609 VWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVV 666
Query: 1537 ISRDGTFDD 1563
ISR+ F +
Sbjct: 667 ISRNVVFHE 675
Score = 79.3 bits (194), Expect(3) = 2e-55
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YM+T DDYSRKVW Y LKHK++AF FK+ K M+E+Q +++K LRTDNG++FC
Sbjct: 474 YMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMDFC 528
Score = 67.8 bits (164), Expect = 3e-08
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +1
Query: 1459 CIFLRYADGVKGYRLWCLDEKSPRFIISRDGTFDDILIAAKDMSKINRLKAKLNGEFEMK 1638
C++L+ DG Y L ++ D+LIAAKD +I +LKA+L+ EFEMK
Sbjct: 933 CVYLKVVDGSAIYLLLYVN---------------DMLIAAKDKLEIAKLKAQLSSEFEMK 977
Query: 1639 DLGAAKKILEMEIRRERKAG 1698
DLGAAKKIL MEI RER++G
Sbjct: 978 DLGAAKKILGMEITRERRSG 997
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 99.0 bits (245), Expect(3) = 5e-55
Identities = 45/72 (62%), Positives = 58/72 (80%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW GSPT+Y++LR+FGC AYAHV++GKLEPRA KCIFL YA GVKGY+LWC + K + +
Sbjct: 620 VWSGSPTNYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYASGVKGYKLWCPETK--KVV 677
Query: 1537 ISRDGTFDDILI 1572
ISR+ F + +I
Sbjct: 678 ISRNVVFHESVI 689
Score = 86.3 bits (212), Expect(3) = 5e-55
Identities = 43/83 (51%), Positives = 55/83 (66%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGIV H +TPQ N +AERMN+T + +CMLSN GL K+F AE V+ ACY
Sbjct: 543 FKSYCKSEGIVCHYTAPHTPQQNDVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACY 602
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
LINR P AI+ KTP +V+ P
Sbjct: 603 LINRSPGYAIDKKTPIEVWSGSP 625
Score = 80.5 bits (197), Expect(3) = 5e-55
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YM+T DDYSRKVW Y LKHK++AF FK+ K M+E+Q +++K LRTDNG+EFC
Sbjct: 485 YMMTIVDDYSRKVWPYFLKHKYQAFDGFKEWKTMVERQTERKVKILRTDNGMEFC 539
Score = 71.2 bits (173), Expect = 2e-09
Identities = 41/80 (51%), Positives = 51/80 (63%)
Frame = +1
Query: 1459 CIFLRYADGVKGYRLWCLDEKSPRFIISRDGTFDDILIAAKDMSKINRLKAKLNGEFEMK 1638
C++L+ DG Y L +D D+LIAAKD S+I +LKA+L+ EFEMK
Sbjct: 969 CVYLKVVDGSVIYLLLYVD---------------DMLIAAKDKSEIEKLKAQLSSEFEMK 1013
Query: 1639 DLGAAKKILEMEIRRERKAG 1698
DLGAAKKIL MEI RER +G
Sbjct: 1014 DLGAAKKILGMEITRERHSG 1033
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 92.8 bits (229), Expect(3) = 2e-54
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGIVRH V +TPQ NG+AERMN+T + +CMLSN L K+F AE V+ ACY
Sbjct: 480 FKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACY 539
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
LINR PS AI+ KTP +V+ P
Sbjct: 540 LINRSPSYAIDKKTPIEVWSGSP 562
Score = 92.8 bits (229), Expect(3) = 2e-54
Identities = 41/72 (56%), Positives = 55/72 (76%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW GSP +Y++LR+FGC AYAHV++GKLEPR KCIFL Y GVKGY+LWC + K + +
Sbjct: 557 VWSGSPANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETK--KVV 614
Query: 1537 ISRDGTFDDILI 1572
ISR+ F + ++
Sbjct: 615 ISRNVVFHESIM 626
Score = 78.2 bits (191), Expect(3) = 2e-54
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YM+T DDYSRKVW Y LKHK++AF FK+ K M+E+Q +++K LRTDNG+E C
Sbjct: 422 YMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELC 476
Score = 70.9 bits (172), Expect = 3e-09
Identities = 41/80 (51%), Positives = 51/80 (63%)
Frame = +1
Query: 1459 CIFLRYADGVKGYRLWCLDEKSPRFIISRDGTFDDILIAAKDMSKINRLKAKLNGEFEMK 1638
C++L+ DG Y L +D D+LIAAKD S+I +LKA+L+ EFEMK
Sbjct: 906 CVYLKVVDGSAIYLLLYVD---------------DMLIAAKDKSEIAKLKAQLSSEFEMK 950
Query: 1639 DLGAAKKILEMEIRRERKAG 1698
DLGAAKKIL MEI RER +G
Sbjct: 951 DLGAAKKILGMEITRERHSG 970
Score = 68.2 bits (165), Expect = 2e-08
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 14/231 (6%)
Frame = +2
Query: 215 HNSRSKSKSKKLQCFHCHKEWHFRKDCSEHRGKGENLR-F*KCTRPQIL*M*PVLQRTIX 391
+ RSKS+ + C +C ++ H +C + + K + R + + + V+
Sbjct: 132 YRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKS 191
Query: 392 XXXXXXXXXXVAQELSGCLIQVVST--ICLNRDWFTTYQFIDDGNVLMGNNVACKVVRIS 565
AQ ++ T +C NRDWF TY+ + G VLMG++ C+V I
Sbjct: 192 DAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIG 251
Query: 566 SIRIKMCNGIVRTLSGVKHVLEF*QKPDFLGYT*L*WL*LQSWRCGYEN---------LH 718
+++IKM +G +RTL V+H+ K + L R GY+
Sbjct: 252 TVQIKMFDGCIRTLLDVRHIPNL--KRSLISLCTL-------DRKGYKYSGGDGILKVTK 302
Query: 719 GALVVMKV-*KHNGL*FLQG-XXXXXXXXXXXXXXYLDTTKLWHIQLSHIS 865
G+LVVMK K+ L L+G D T LWH++L H+S
Sbjct: 303 GSLVVMKADIKYANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMS 353
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 90.9 bits (224), Expect(3) = 5e-54
Identities = 43/106 (40%), Positives = 70/106 (66%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
+W GSP +Y++L++FGC AYAHV++GKLEPRA KCIFL Y GVK Y+LWC ++ + +
Sbjct: 587 MWSGSPANYSDLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKAYKLWC--PETQKVV 644
Query: 1537 ISRDGTFDDILIAAKDMSKINRLKAKLNGEFEMKDLGAAKKILEME 1674
ISR+ F++ ++ S +K++ +++ L ++ + E E
Sbjct: 645 ISRNVIFNETVMLNDKSSTNVPVKSQQKASVQVEHLISSVHVPEKE 690
Score = 90.5 bits (223), Expect(3) = 5e-54
Identities = 43/83 (51%), Positives = 57/83 (68%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGIVRH V +TPQ NG+ ERMN+T + +CMLSN GL ++F AE + ACY
Sbjct: 510 FKSYCRSEGIVRHYTVSHTPQQNGVVERMNRTIISKARCMLSNAGLPRRFWAEAASTACY 569
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
LINR PS AI+ KTP +++ P
Sbjct: 570 LINRSPSYAIDKKTPIEMWSGSP 592
Score = 80.9 bits (198), Expect(3) = 5e-54
Identities = 35/55 (63%), Positives = 43/55 (78%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YM+T DDYSRKVW Y LKHK EAF FK+ K M+E+Q +++K LRTDNG+EFC
Sbjct: 452 YMMTIVDDYSRKVWPYFLKHKFEAFLVFKEWKTMVERQTERKVKVLRTDNGMEFC 506
Score = 75.5 bits (184), Expect(2) = 1e-22
Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Frame = +2
Query: 467 ICLNRDWFTTYQFIDDGNVLMGNNVACKVVRISSIRIKMCNGIVRTLSGVKHVLEF*QKP 646
+C NRDWFTTY+ + GNVLMG+N CKV + +I+IKM +G +RTLS V+H+ K
Sbjct: 252 MCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSL--KR 309
Query: 647 DFLGYT*L*WL*LQSWRCGY---------ENLHGALVVMKV-*KHNGL*FLQGXXXXXXX 796
+ + + L R GY + G+LVVMK K+ L LQG
Sbjct: 310 NLISLSTL-------DRKGYRYSGGDGILKVTKGSLVVMKADIKNADLYHLQGTTIVGNV 362
Query: 797 XXXXXXXYLDTTKLWHIQLSHIS 865
L + LWH++L H+S
Sbjct: 363 AAVTDS--LSNSDLWHMRLGHMS 383
Score = 60.5 bits (145), Expect(2) = 1e-22
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 10/164 (6%)
Frame = +1
Query: 10 LLCSKPSS*EHSVDTMMYGTKTLFMEDVMAALNSKELKKKVAAENNNDSSSGGLVAHGR- 186
LLCS PSS + DT++Y TL +++V AL++KE KK+ ++S LV GR
Sbjct: 89 LLCSLPSSYANFRDTILYSRDTLTLQEVYDALHAKEKMKKMVPSEGSNSQPESLVVRGRQ 148
Query: 187 IEKNGPNRRAQFXXXXXXXXXTVFPLSQGMAF*KRLFRA*RERGKPQILEMYK------- 345
EKN N+ + + KR + K Q E +K
Sbjct: 149 QEKNTDNKSRDKSSSGYRGRSKSRGRYKSCKYCKRGGHDISDCWKLQNKEKHKGNYKPKG 208
Query: 346 TSNSINVAGVAKDNSDGVDALLVTVG--SSRAEWMLDSGCFYHM 471
A VA DN + L+ G + EW+LD+GC YHM
Sbjct: 209 KQEEQGKAAVATDNKPDAELLVAYAGCVQTSDEWLLDTGCTYHM 252
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 94.0 bits (232), Expect(3) = 5e-54
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGI+RH V +TPQ NG+AERMN+T + +CMLSN GL K+F AE V+ ACY
Sbjct: 556 FKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACY 615
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
LINR P AI+ KTP KV+ P
Sbjct: 616 LINRSPGYAIDKKTPIKVWSGSP 638
Score = 89.7 bits (221), Expect(3) = 5e-54
Identities = 40/69 (57%), Positives = 52/69 (75%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW GSP +Y++L++FGC AYAHV++GKLEPR KCIFL Y GVKGY+LWC + K + +
Sbjct: 633 VWSGSPANYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWCPETK--KVV 690
Query: 1537 ISRDGTFDD 1563
ISR F +
Sbjct: 691 ISRYVVFHE 699
Score = 78.6 bits (192), Expect(3) = 5e-54
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YM+T +DYSRKVW Y LKHK++AF FK+ K M+E+Q +++K LRTDNG+EFC
Sbjct: 498 YMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFC 552
Score = 68.6 bits (166), Expect(2) = 4e-18
Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Frame = +2
Query: 467 ICLNRDWFTTYQFIDDGNVLMGNNVACKVVRISSIRIKMCNGIVRTLSGVKHVLEF*QK- 643
+C NRDWF TY+ + G VLMG++ C+V I +++IKM +G +RTLS V+H+ +
Sbjct: 295 MCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSL 354
Query: 644 -----PDFLGYT*L*WL*LQSWRCGYENL-HGALVVMKV-*KHNGL*FLQG-XXXXXXXX 799
D GY S G + G+LVVMK K L LQG
Sbjct: 355 ISLCTLDCKGYK-------YSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVAT 407
Query: 800 XXXXXXYLDTTKLWHIQLSHIS 865
D T LWH++L H+S
Sbjct: 408 VSDSLSNSDATNLWHMRLGHMS 429
Score = 52.4 bits (124), Expect(2) = 4e-18
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Frame = +1
Query: 10 LLCSKPSS*EHSVDTMMYGTKTLFMEDVMAALNSKELKKKVAAENNNDSSSGGLVAHG-R 186
LLCS PSS + DT++Y TL +++V AL++KE KK+ ++S + GLV G +
Sbjct: 132 LLCSLPSSYANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVQGSQ 191
Query: 187 IEKNGPNRRAQFXXXXXXXXXTVFPLSQGMAF*KR----LFRA*RERGKPQILEMY---- 342
EKN N+ + + KR + + + + K + Y
Sbjct: 192 QEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKG 251
Query: 343 KTSNSINVAGVAKDNSDGVDALLVTVGSSRA--EWMLDSGCFYHM 471
K + A V + SD + L+ G ++ +W+LD+ C YHM
Sbjct: 252 KKEDEGKAAVVTDEKSDA-ELLVAYAGCAQTSDQWILDTACTYHM 295
Score = 68.6 bits (166), Expect = 1e-08
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = +1
Query: 1459 CIFLRYADGVKGYRLWCLDEKSPRFIISRDGTFDDILIAAKDMSKINRLKAKLNGEFEMK 1638
C++L+ DG Y L +D D+LIAAKD S+I +LKA+L+ EFEMK
Sbjct: 923 CVYLKVVDGSAIYLLLYVD---------------DMLIAAKDKSEIAKLKAQLSSEFEMK 967
Query: 1639 DLGAAKKILEMEIRRER 1689
DLGAAKKIL MEI RER
Sbjct: 968 DLGAAKKILGMEITRER 984
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 94.0 bits (232), Expect(3) = 5e-54
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGI+RH V +TPQ NG+AERMN+T + +CMLSN GL K+F AE V+ ACY
Sbjct: 388 FKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACY 447
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
LINR P AI+ KTP KV+ P
Sbjct: 448 LINRSPGYAIDKKTPIKVWSGSP 470
Score = 89.7 bits (221), Expect(3) = 5e-54
Identities = 40/69 (57%), Positives = 52/69 (75%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW GSP +Y++L++FGC AYAHV++GKLEPR KCIFL Y GVKGY+LWC + K + +
Sbjct: 465 VWSGSPANYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWCPETK--KVV 522
Query: 1537 ISRDGTFDD 1563
ISR F +
Sbjct: 523 ISRYVVFHE 531
Score = 78.6 bits (192), Expect(3) = 5e-54
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YM+T +DYSRKVW Y LKHK++AF FK+ K M+E+Q +++K LRTDNG+EFC
Sbjct: 330 YMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFC 384
Score = 68.6 bits (166), Expect(2) = 5e-11
Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Frame = +2
Query: 467 ICLNRDWFTTYQFIDDGNVLMGNNVACKVVRISSIRIKMCNGIVRTLSGVKHVLEF*QK- 643
+C NRDWF TY+ + G VLMG++ C+V I +++IKM +G +RTLS V+H+ +
Sbjct: 127 MCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSL 186
Query: 644 -----PDFLGYT*L*WL*LQSWRCGYENL-HGALVVMKV-*KHNGL*FLQG-XXXXXXXX 799
D GY S G + G+LVVMK K L LQG
Sbjct: 187 ISLCTLDCKGYK-------YSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVAT 239
Query: 800 XXXXXXYLDTTKLWHIQLSHIS 865
D T LWH++L H+S
Sbjct: 240 VSDSLSNSDATNLWHMRLGHMS 261
Score = 28.5 bits (62), Expect(2) = 5e-11
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 367 AGVAKDNSDGVDALLVTVGSSRA--EWMLDSGCFYHM 471
A V D + L+ G ++ +W+LD+ C YHM
Sbjct: 91 AAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHM 127
Score = 68.6 bits (166), Expect = 1e-08
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = +1
Query: 1459 CIFLRYADGVKGYRLWCLDEKSPRFIISRDGTFDDILIAAKDMSKINRLKAKLNGEFEMK 1638
C++L+ DG Y L +D D+LIAAKD S+I +LKA+L+ EFEMK
Sbjct: 755 CVYLKVVDGSAIYLLLYVD---------------DMLIAAKDKSEIAKLKAQLSSEFEMK 799
Query: 1639 DLGAAKKILEMEIRRER 1689
DLGAAKKIL MEI RER
Sbjct: 800 DLGAAKKILGMEITRER 816
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 95.1 bits (235), Expect(3) = 1e-53
Identities = 43/72 (59%), Positives = 56/72 (77%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW GSP +Y++LR+FGC AYAHV++GKLEPRA KCIFL Y GVKGY+LWC + K + +
Sbjct: 683 VWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVV 740
Query: 1537 ISRDGTFDDILI 1572
ISR+ F + +I
Sbjct: 741 ISRNVVFHESVI 752
Score = 84.0 bits (206), Expect(3) = 1e-53
Identities = 42/83 (50%), Positives = 53/83 (63%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGIV H V +TPQ NG+AERMN + +CMLSN L K+F AE V+ CY
Sbjct: 606 FKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCY 665
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
LINR PS A + KTP +V+ P
Sbjct: 666 LINRSPSYATDKKTPIEVWSGSP 688
Score = 81.6 bits (200), Expect(3) = 1e-53
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YM+T DDYSRKVW Y LKHK++AF FK+ K M+E+Q K++K LRTDNG+EFC
Sbjct: 548 YMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFC 602
Score = 68.2 bits (165), Expect = 2e-08
Identities = 40/80 (50%), Positives = 50/80 (62%)
Frame = +1
Query: 1459 CIFLRYADGVKGYRLWCLDEKSPRFIISRDGTFDDILIAAKDMSKINRLKAKLNGEFEMK 1638
C++L+ DG Y L +D D+LIAAKD S+I +LKA+L+ EF MK
Sbjct: 1032 CVYLKVVDGSAIYLLLYVD---------------DMLIAAKDKSEIAKLKAQLSSEFGMK 1076
Query: 1639 DLGAAKKILEMEIRRERKAG 1698
DLGAAKKIL MEI RER +G
Sbjct: 1077 DLGAAKKILGMEITRERHSG 1096
Score = 67.0 bits (162), Expect = 4e-08
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 14/231 (6%)
Frame = +2
Query: 215 HNSRSKSKSKKLQCFHCHKEWHFRKDCSEHRGKGENL-RF*KCTRPQIL*M*PVLQRTIX 391
+ RSKS+ + C +C ++ H +C + + K + ++ + + V+
Sbjct: 258 YRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKS 317
Query: 392 XXXXXXXXXXVAQELSGCLIQVVST--ICLNRDWFTTYQFIDDGNVLMGNNVACKVVRIS 565
AQ ++ T +C NRDWF TY+ + G VLMG++ C+V I
Sbjct: 318 DTELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIG 377
Query: 566 SIRIKMCNGIVRTLSGVKHVLEF*QKPDFLGYT*L*WL*LQSWRCGYEN---------LH 718
+++IKM +G +RTLS V+H+ K + L R GY+
Sbjct: 378 TVQIKMFDGYIRTLSDVRHIPNL--KRSLISLCTL-------DRKGYKYSGGDGILKVTK 428
Query: 719 GALVVMKV-*KHNGL*FLQG-XXXXXXXXXXXXXXYLDTTKLWHIQLSHIS 865
G+LVVMK K L L+G D T LWH++L H+S
Sbjct: 429 GSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMS 479
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 95.1 bits (235), Expect(3) = 1e-53
Identities = 43/72 (59%), Positives = 56/72 (77%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW GSP +Y++LR+FGC AYAHV++GKLEPRA KCIFL Y GVKGY+LWC + K + +
Sbjct: 683 VWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVV 740
Query: 1537 ISRDGTFDDILI 1572
ISR+ F + +I
Sbjct: 741 ISRNVVFHESVI 752
Score = 84.0 bits (206), Expect(3) = 1e-53
Identities = 42/83 (50%), Positives = 53/83 (63%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGIV H V +TPQ NG+AERMN + +CMLSN L K+F AE V+ CY
Sbjct: 606 FKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCY 665
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
LINR PS A + KTP +V+ P
Sbjct: 666 LINRSPSYATDKKTPIEVWSGSP 688
Score = 81.6 bits (200), Expect(3) = 1e-53
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YM+T DDYSRKVW Y LKHK++AF FK+ K M+E+Q K++K LRTDNG+EFC
Sbjct: 548 YMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFC 602
Score = 68.2 bits (165), Expect = 2e-08
Identities = 40/80 (50%), Positives = 50/80 (62%)
Frame = +1
Query: 1459 CIFLRYADGVKGYRLWCLDEKSPRFIISRDGTFDDILIAAKDMSKINRLKAKLNGEFEMK 1638
C++L+ DG Y L +D D+LIAAKD S+I +LKA+L+ EF MK
Sbjct: 1032 CVYLKVVDGSAIYLLLYVD---------------DMLIAAKDKSEIAKLKAQLSSEFGMK 1076
Query: 1639 DLGAAKKILEMEIRRERKAG 1698
DLGAAKKIL MEI RER +G
Sbjct: 1077 DLGAAKKILGMEITRERHSG 1096
Score = 67.0 bits (162), Expect = 4e-08
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 14/231 (6%)
Frame = +2
Query: 215 HNSRSKSKSKKLQCFHCHKEWHFRKDCSEHRGKGENL-RF*KCTRPQIL*M*PVLQRTIX 391
+ RSKS+ + C +C ++ H +C + + K + ++ + + V+
Sbjct: 258 YRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKS 317
Query: 392 XXXXXXXXXXVAQELSGCLIQVVST--ICLNRDWFTTYQFIDDGNVLMGNNVACKVVRIS 565
AQ ++ T +C NRDWF TY+ + G VLMG++ C+V I
Sbjct: 318 DTELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIG 377
Query: 566 SIRIKMCNGIVRTLSGVKHVLEF*QKPDFLGYT*L*WL*LQSWRCGYEN---------LH 718
+++IKM +G +RTLS V+H+ K + L R GY+
Sbjct: 378 TVQIKMFDGYIRTLSDVRHIPNL--KRSLISLCTL-------DRKGYKYSGGDGILKVTK 428
Query: 719 GALVVMKV-*KHNGL*FLQG-XXXXXXXXXXXXXXYLDTTKLWHIQLSHIS 865
G+LVVMK K L L+G D T LWH++L H+S
Sbjct: 429 GSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMS 479
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 94.7 bits (234), Expect(3) = 2e-53
Identities = 47/106 (44%), Positives = 71/106 (66%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW GSP +Y++LR+FGC AYAHV++GKLEPRA KCIFL Y GVKGY+LWC + K + +
Sbjct: 683 VWSGSPANYSDLRVFGCIAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVV 740
Query: 1537 ISRDGTFDDILIAAKDMSKINRLKAKLNGEFEMKDLGAAKKILEME 1674
ISR+ F + ++ + S ++++ +++ L ++ LE E
Sbjct: 741 ISRNVVFHESVMLYDNPSTNVPVESQEKASVQVEHLISSGHALEKE 786
Score = 88.2 bits (217), Expect(3) = 2e-53
Identities = 45/83 (54%), Positives = 57/83 (68%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + EGIVRH V +TPQ NG+AERM +T +++CML VGL K+F AE V+ ACY
Sbjct: 606 FKSYCKCEGIVRHYTVPHTPQQNGVAERMKRTIISKSRCMLPYVGLPKQFWAEAVSTACY 665
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
LINR PS AI+ KTP +V+ P
Sbjct: 666 LINRSPSYAIDKKTPIEVWSGSP 688
Score = 77.4 bits (189), Expect(3) = 2e-53
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YM+T DDYSRKVW Y LKHK++AF FK+ K M++KQ +++K LRTDNG+E C
Sbjct: 548 YMMTTVDDYSRKVWSYFLKHKYQAFDVFKEWKTMVKKQTERKVKILRTDNGMELC 602
Score = 55.8 bits (133), Expect(2) = 3e-09
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +2
Query: 467 ICLNRDWFTTYQFIDDGNVLMGNNVACKVVRISSIRIKMCNGIVRTLSGVKHV 625
+C NRDWF TY+ + G VLMG++ V I ++IKM +G +R LS V+H+
Sbjct: 262 MCPNRDWFATYEAVQGGTVLMGDDTPFGVAGIGIVQIKMFDGCIRILSDVQHI 314
Score = 35.0 bits (79), Expect(2) = 3e-09
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 9/138 (6%)
Frame = +1
Query: 85 EDVMAALNSKELKKKVAAENNNDSSSGGLVAHGRIEKNGPNRRAQFXXXXXXXXXTVFPL 264
++++A L S E+KK + +E +N + G +V + EKN N+
Sbjct: 125 KEIIAELESMEMKKMIPSEGSNSQAEGLIVRGRQQEKNRKNQSRDKSSSSYRGRSKSRGN 184
Query: 265 SQGMAF*KRLFRA*RE----RGKPQILEMYKTSNSINVAG---VAKDNSDGVDALLVTVG 423
+ + KR R E + K + E Y + G V D + L+
Sbjct: 185 YKSCKYCKRDGRDISECWKLQDKDKRTEKYISKGKKEEEGKAAVVTDEKSDAELLVAYAD 244
Query: 424 SSRA--EWMLDSGCFYHM 471
++ +W+LD+ C YHM
Sbjct: 245 CAQTSDQWILDTACTYHM 262
Score = 65.5 bits (158), Expect = 1e-07
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = +1
Query: 1459 CIFLRYADGVKGYRLWCLDEKSPRFIISRDGTFDDILIAAKDMSKINRLKAKLNGEFEMK 1638
C++L+ DG Y L +D D+LIAAK S+I++LKA+L EFEMK
Sbjct: 925 CVYLKVVDGSTIYLLLYVD---------------DMLIAAKHKSEISKLKAQLTSEFEMK 969
Query: 1639 DLGAAKKILEMEIRRER 1689
DLGAAKKIL MEI RE+
Sbjct: 970 DLGAAKKILGMEITREK 986
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 95.1 bits (235), Expect(3) = 2e-53
Identities = 47/83 (56%), Positives = 59/83 (71%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGIVRH V +TPQ NG+AERMN+T + +CMLSN GL K+F AE V+ ACY
Sbjct: 392 FKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACY 451
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
LINR PS AI+ KTP +V+ P
Sbjct: 452 LINRSPSYAIDKKTPIEVWSSSP 474
Score = 87.4 bits (215), Expect(3) = 2e-53
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW SP Y++LR+F C AYAHV++GKLEPRA KCIFL Y GVKGY+LWC + K + +
Sbjct: 469 VWSSSPAKYSDLRVFSCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVV 526
Query: 1537 ISRDGTFDD 1563
I+R+ F +
Sbjct: 527 INRNVVFHE 535
Score = 77.8 bits (190), Expect(3) = 2e-53
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YM+T DDYSRKVW Y LKHK++AF FK+ K M+E+Q +++K LR DNG+EFC
Sbjct: 334 YMMTIIDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRPDNGMEFC 388
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 90.9 bits (224), Expect(3) = 1e-52
Identities = 40/72 (55%), Positives = 55/72 (76%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW GSP +Y++L++FGC AYAHV++GKLEPRA KCIFL Y VKGY+LWC + K + +
Sbjct: 647 VWSGSPANYSDLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSSVKGYKLWCPETK--KVV 704
Query: 1537 ISRDGTFDDILI 1572
ISR+ F + ++
Sbjct: 705 ISRNVVFHESIM 716
Score = 86.3 bits (212), Expect(3) = 1e-52
Identities = 45/83 (54%), Positives = 57/83 (68%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGIVRH V +TPQ NG+AERMN+ + +CMLSN GL K+F AE V+ ACY
Sbjct: 571 FKSYCKSEGIVRHYTVPHTPQQNGVAERMNRIIISKARCMLSNAGLPKQFWAEAVSTACY 630
Query: 1304 LINRFPSTAIECKTPEKVYG*GP 1372
LINR PS A + KTP +V+ P
Sbjct: 631 LINRSPSYANK-KTPIEVWSGSP 652
Score = 80.5 bits (197), Expect(3) = 1e-52
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YM+T DDYSRKVW Y LKHK++AF FK+ K M+E+Q +++K LRTDNG+EFC
Sbjct: 513 YMMTIVDDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFC 567
Score = 68.9 bits (167), Expect(2) = 3e-18
Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Frame = +2
Query: 467 ICLNRDWFTTYQFIDDGNVLMGNNVACKVVRISSIRIKMCNGIVRTLSGVKHVLEF*QKP 646
+C NRDWF TY+ + G VLMG++ C+V I +++IKM +G +RTLS V+H+ K
Sbjct: 310 MCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNL--KR 367
Query: 647 DFLGYT*L*WL*LQSWRCGYEN---------LHGALVVMKV-*KHNGL*FLQG-XXXXXX 793
+ L R GY+ G+LVVMK K L LQG
Sbjct: 368 SLISLCTL-------DRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGNV 420
Query: 794 XXXXXXXXYLDTTKLWHIQLSHIS 865
D T LWH++L H+S
Sbjct: 421 ATVSDSLSNSDATNLWHMRLGHMS 444
Score = 52.4 bits (124), Expect(2) = 3e-18
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 10/164 (6%)
Frame = +1
Query: 10 LLCSKPSS*EHSVDTMMYGTKTLFMEDVMAALNSKELKKKVAAENNNDSSSGGLVAHG-R 186
LLCS PSS + DT++Y TL +++V AL++KE KK+ ++S + GLV G +
Sbjct: 147 LLCSLPSSYANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGSQ 206
Query: 187 IEKNGPNRRAQFXXXXXXXXXTVFPLSQGMAF*KR----LFRA*RERGKPQILEMYKTSN 354
EKN N+ + + KR + + + + K + Y
Sbjct: 207 QEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKG 266
Query: 355 SINVAG---VAKDNSDGVDALLVTVGSSRA--EWMLDSGCFYHM 471
G V D + L+ G ++ +W+LD+ C YHM
Sbjct: 267 KKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHM 310
>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 90.1 bits (222), Expect(3) = 3e-52
Identities = 43/80 (53%), Positives = 55/80 (68%)
Frame = +2
Query: 1121 AFNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKAC 1300
AF+ + EGIVRH + TPQ NG+AERMN+T T+CMLSN ++K+F AE N AC
Sbjct: 503 AFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISNTRCMLSNARMNKRFWAEVANTAC 562
Query: 1301 YLINRFPSTAIECKTPEKVY 1360
YLINR PS + KTP +V+
Sbjct: 563 YLINRSPSIPLNKKTPIEVW 582
Score = 87.8 bits (216), Expect(3) = 3e-52
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW G P DY+ LR+FGC AYAHV++GKLEPRA KC+FL Y GVKGY+LW + K+ +
Sbjct: 581 VWSGMPADYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLW--NPKTNKTF 638
Query: 1537 ISRDGTFDD 1563
+SR F++
Sbjct: 639 MSRSVVFNE 647
Score = 78.6 bits (192), Expect(3) = 3e-52
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
YMLT DDYSRKVW Y LKHK + FA FK+ K MIE+Q K++K LRTD+G EFC
Sbjct: 446 YMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQTEKEVKVLRTDSGGEFC 500
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 92.4 bits (228), Expect(3) = 3e-52
Identities = 41/69 (59%), Positives = 54/69 (78%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW G P +Y++LR+FGC AYAHV++GKLEPRA KCIFL Y+ GVKGY+LWC + K + +
Sbjct: 476 VWSGFPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPETK--KVV 533
Query: 1537 ISRDGTFDD 1563
ISR+ F +
Sbjct: 534 ISRNVVFHE 542
Score = 84.7 bits (208), Expect(3) = 3e-52
Identities = 44/79 (55%), Positives = 54/79 (68%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGIVRH TPQ NG+AERMN+T + +CMLSN GL K+F A V+ CY
Sbjct: 403 FKSYCKSEGIVRHY----TPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCY 458
Query: 1304 LINRFPSTAIECKTPEKVY 1360
LINR PS AI+ KTP KV+
Sbjct: 459 LINRSPSYAIDKKTPIKVW 477
Score = 79.0 bits (193), Expect(3) = 3e-52
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
Y++T DDYSRKVW Y LKHK++AF FK+ K M+E+Q +++K LRTDNG+EFC
Sbjct: 345 YIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFC 399
Score = 63.5 bits (153), Expect(2) = 1e-09
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Frame = +2
Query: 467 ICLNRDWFTTYQFIDDGNVLMGNNVACKVVRISSIRIKMCNGIVRTLSGVKHVLEF*QKP 646
+C NRDWF TY+ + G VLMG++ C+V I ++IKM +G + TLS V+H+ K
Sbjct: 142 MCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNL--KR 199
Query: 647 DFLGYT*L*WL*LQSWRCGYEN---------LHGALVVMKV-*KHNGL*FLQG-XXXXXX 793
+ L R GY+ G+LVVMK K L L+G
Sbjct: 200 SLISLCTL-------DRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNV 252
Query: 794 XXXXXXXXYLDTTKLWHIQLSHIS 865
D T LWH++L H+S
Sbjct: 253 AAVSDSLSNSDATNLWHMRLGHMS 276
Score = 28.5 bits (62), Expect(2) = 1e-09
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 367 AGVAKDNSDGVDALLVTVGSSRA--EWMLDSGCFYHM 471
A V D + L+ G ++ +W+LD+ C YHM
Sbjct: 106 AAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHM 142
Score = 70.5 bits (171), Expect = 4e-09
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = +1
Query: 1558 DDILIAAKDMSKINRLKAKLNGEFEMKDLGAAKKILEMEIRRERKAG 1698
DD+LIAAKD S+I +LKA+L+ EFEMKDLGAAKKIL MEI RER +G
Sbjct: 672 DDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILSMEITRERHSG 718
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 92.4 bits (228), Expect(3) = 3e-52
Identities = 41/69 (59%), Positives = 54/69 (78%)
Frame = +1
Query: 1357 VWLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFI 1536
VW G P +Y++LR+FGC AYAHV++GKLEPRA KCIFL Y+ GVKGY+LWC + K + +
Sbjct: 476 VWSGFPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPETK--KVV 533
Query: 1537 ISRDGTFDD 1563
ISR+ F +
Sbjct: 534 ISRNVVFHE 542
Score = 84.7 bits (208), Expect(3) = 3e-52
Identities = 44/79 (55%), Positives = 54/79 (68%)
Frame = +2
Query: 1124 FNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AETVNKACY 1303
F + +EGIVRH TPQ NG+AERMN+T + +CMLSN GL K+F A V+ CY
Sbjct: 403 FKSYCKSEGIVRHY----TPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCY 458
Query: 1304 LINRFPSTAIECKTPEKVY 1360
LINR PS AI+ KTP KV+
Sbjct: 459 LINRSPSYAIDKKTPIKVW 477
Score = 79.0 bits (193), Expect(3) = 3e-52
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEFC 1115
Y++T DDYSRKVW Y LKHK++AF FK+ K M+E+Q +++K LRTDNG+EFC
Sbjct: 345 YIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFC 399
Score = 63.5 bits (153), Expect(2) = 1e-09
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Frame = +2
Query: 467 ICLNRDWFTTYQFIDDGNVLMGNNVACKVVRISSIRIKMCNGIVRTLSGVKHVLEF*QKP 646
+C NRDWF TY+ + G VLMG++ C+V I ++IKM +G + TLS V+H+ K
Sbjct: 142 MCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNL--KR 199
Query: 647 DFLGYT*L*WL*LQSWRCGYEN---------LHGALVVMKV-*KHNGL*FLQG-XXXXXX 793
+ L R GY+ G+LVVMK K L L+G
Sbjct: 200 SLISLCTL-------DRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNV 252
Query: 794 XXXXXXXXYLDTTKLWHIQLSHIS 865
D T LWH++L H+S
Sbjct: 253 AAVSDSLSNSDATNLWHMRLGHMS 276
Score = 28.5 bits (62), Expect(2) = 1e-09
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 367 AGVAKDNSDGVDALLVTVGSSRA--EWMLDSGCFYHM 471
A V D + L+ G ++ +W+LD+ C YHM
Sbjct: 106 AAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHM 142
Score = 70.5 bits (171), Expect = 4e-09
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = +1
Query: 1558 DDILIAAKDMSKINRLKAKLNGEFEMKDLGAAKKILEMEIRRERKAG 1698
DD+LIAAKD S+I +LKA+L+ EFEMKDLGAAKKIL MEI RER +G
Sbjct: 672 DDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILSMEITRERHSG 718
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 91.3 bits (225), Expect(3) = 3e-51
Identities = 47/84 (55%), Positives = 57/84 (67%)
Frame = +2
Query: 1103 LGILWGAFNVFYNNEGIVRHRMVKNTPQWNGLAERMNKTTTERTQCMLSNVGLSKKF*AE 1282
L L FN EGI RHR V+ TPQ NGLAERMN+T ER +CMLS+ GLSK F AE
Sbjct: 522 LEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVFWAE 581
Query: 1283 TVNKACYLINRFPSTAIECKTPEK 1354
A +LINR PS+A++ KTP++
Sbjct: 582 AAETAVHLINRSPSSALQFKTPQE 605
Score = 87.0 bits (214), Expect(3) = 3e-51
Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 6/117 (5%)
Frame = +1
Query: 1360 WLGSPTDYTNLRIFGCPAYAHVNDGKLEPRARKCIFLRYADGVKGYRLWCLDEKSPRFII 1539
W G DY +L++FGC AY H KLEPRA KCIFL Y GVKGY+LW + + II
Sbjct: 607 WTGKAADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCII 666
Query: 1540 SRDGTFDDILIA----AKDMSKINRLKAKLNGEF--EMKDLGAAKKILEMEIRRERK 1692
SRD TF++ ++ AKD+ +++L+ ++ E K + K + EI ER+
Sbjct: 667 SRDVTFNEQDMSKQTPAKDVEGLDQLQFEVEHETLQPEKSKETSSKTAQEEIVHERQ 723
Score = 74.7 bits (182), Expect(3) = 3e-51
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +3
Query: 951 YMLTFTDDYSRKVWMYILKHKHEAFAQFKQ*KAMIEKQIGKQIKRLRTDNGLEF 1112
Y LT DDYSRKVW+Y LK+K E F +FK+ K ++E Q +++K+LRTDNGLEF
Sbjct: 471 YFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLEF 524
Score = 87.4 bits (215), Expect = 3e-14
Identities = 71/216 (32%), Positives = 96/216 (44%), Gaps = 1/216 (0%)
Frame = +2
Query: 221 SRSKSKSKKLQCFHCHKEWHFRKDCSEHRGKGENLRF*KCTRPQIL*M*PVLQRTIXXXX 400
SRSKSK+KK +CF CHKE HF+KDC + R + TR +
Sbjct: 216 SRSKSKTKKFKCFICHKEGHFKKDCPDRRQNTVKKTVNRWTRVR---------------- 259
Query: 401 XXXXXXXVAQELSGCLIQ-VVSTICLNRDWFTTYQFIDDGNVLMGNNVACKVVRISSIRI 577
SG LIQ + T L++ T++ D G VL+GNN CK++ ++RI
Sbjct: 260 ------------SGYLIQGALFTCVLSKLGLKTFKEADGGYVLLGNNKHCKILGTGTVRI 307
Query: 578 KMCNGIVRTLSGVKHVLEF*QKPDFLGYT*L*WL*LQSWRCGYENLHGALVVMKV*KHNG 757
K +GI R L V+++ E + LG +S G+L VMK NG
Sbjct: 308 KHYDGIERVLEDVRYIPELKRNLISLGMLDKSGYTFKSEPNSLRVARGSLTVMKGTIKNG 367
Query: 758 L*FLQGXXXXXXXXXXXXXXYLDTTKLWHIQLSHIS 865
L L G + TTKLWH +L HIS
Sbjct: 368 LYTLIGQTVTGKVSTVLKED-VGTTKLWHQRLGHIS 402