BLASTX nr result

ID: Cinnamomum23_contig00039486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00039486
         (253 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                        65   2e-08
ref|XP_008456829.1| PREDICTED: uncharacterized protein LOC103496...    57   6e-06

>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 34/81 (41%), Positives = 47/81 (58%)
 Frame = -1

Query: 244 TISRISRESLESVGTSEYRFI*HCVSTKVKNGPEITSDTKVKNGSTCNMAKAKGTGVKGK 65
           T+S+  +E   +V  ++ +FI    S+K K GP      K   G   N +K K    KGK
Sbjct: 196 TLSK-GKEVEANVAVTKRKFI-RGSSSKNKVGPSKAQMKKKGKGKAPNTSKVKKNADKGK 253

Query: 64  CFHCGKTGHWKRNCPEYLSKK 2
           CFHC + GHWKRNCP+YL++K
Sbjct: 254 CFHCNQDGHWKRNCPKYLAEK 274


>ref|XP_008456829.1| PREDICTED: uncharacterized protein LOC103496667 [Cucumis melo]
          Length = 190

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
 Frame = -1

Query: 211 SVGTSEYRFI*HCVSTK-VKNGPEITSDTKVKN-----GSTCNMAKAKGT----GVKGKC 62
           +V TS  +F  H  ST   K+ P  + + K K      G+  N+A AK T      KG C
Sbjct: 106 NVATSTRKF--HRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGIC 163

Query: 61  FHCGKTGHWKRNCPEYLSKK 2
           FHC + GHWKRNCP+YL++K
Sbjct: 164 FHCNQEGHWKRNCPKYLAEK 183


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