BLASTX nr result

ID: Cinnamomum23_contig00038543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00038543
         (747 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...   120   1e-24
ref|YP_588284.1| hypothetical protein ZeamMp020 [Zea mays subsp....    96   2e-17
gb|AFW86835.1| hypothetical protein ZEAMMB73_214691 [Zea mays]         74   1e-10
gb|KJB09778.1| hypothetical protein B456_001G164600 [Gossypium r...    61   8e-07
ref|XP_002531741.1| conserved hypothetical protein [Ricinus comm...    47   8e-06

>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
          Length = 1094

 Score =  120 bits (300), Expect = 1e-24
 Identities = 77/160 (48%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
 Frame = -3

Query: 604  YPKHWSDPVAGKGPRSAYYYTTLHLALHIYRANPCPVSGRAKGG--FNPYSLSPSQPRLM 431
            YPK+WS PVAGKGPRSA YYTTLH ALHIYRANPCPV GR KG     PYSL+ +     
Sbjct: 883  YPKNWSGPVAGKGPRSANYYTTLHSALHIYRANPCPVPGRVKGASILIPYSLAQAN---- 938

Query: 430  GPSLIQGGEWGLEKHC*EEDPWPLFILYRGLRPHGSGAEMEEIEHGNKKQARLPF*SF** 251
            G  LIQGGE                          SGA    +E                
Sbjct: 939  GALLIQGGE--------------------------SGAPRSTVERKI------------- 959

Query: 250  RGMEKVDKTESHFPVEKMGSFFV--STKRKRIILSS*PKP 137
             GMEKVDKT+SHFPVEKMGSFFV   + RK   + + P P
Sbjct: 960  LGMEKVDKTDSHFPVEKMGSFFVLHFSSRKNNNIENVPNP 999


>ref|YP_588284.1| hypothetical protein ZeamMp020 [Zea mays subsp. mays]
           gi|94502700|ref|YP_588308.1| hypothetical protein
           ZeamMp046 [Zea mays subsp. mays]
           gi|40795138|gb|AAR91182.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|40795139|gb|AAR91183.1|
           hypothetical protein (mitochondrion) [Zea mays]
          Length = 99

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 49/72 (68%), Positives = 50/72 (69%)
 Frame = -1

Query: 294 GIRSKLAFLFDHFDRGGWRKLTKQNHISQSKRWVPFSSRQRGKESS*APNPSPSFVEPCI 115
           G +  L  LF HF RGGW K  KQ HI QSKRWVPFSSRQR      APNP   FV PCI
Sbjct: 7   GNKKHLKCLFYHFYRGGWIKWAKQTHIFQSKRWVPFSSRQRKNHLENAPNP---FVGPCI 63

Query: 114 VSDPNLPGASPP 79
           VSDPNLPGASPP
Sbjct: 64  VSDPNLPGASPP 75


>gb|AFW86835.1| hypothetical protein ZEAMMB73_214691 [Zea mays]
          Length = 77

 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 44/78 (56%), Positives = 50/78 (64%)
 Frame = -3

Query: 244 MEKVDKTESHFPVEKMGSFFVSTKRKRIILSS*PKPFLRRAVYCKXXXXXXXXXXXXXXE 65
           M+KV KT+SHF +EKMGSFFVSTK KRIIL +   PF+   +                 E
Sbjct: 1   MDKVGKTDSHFSIEKMGSFFVSTK-KRIILKTLLNPFVGPCI-VSDPNLPGASPPLEASE 58

Query: 64  VGEPYDGQLPPAVRRGLS 11
           VGEPYDGQL PAVRRGLS
Sbjct: 59  VGEPYDGQLSPAVRRGLS 76


>gb|KJB09778.1| hypothetical protein B456_001G164600 [Gossypium raimondii]
          Length = 494

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 32/49 (65%), Positives = 35/49 (71%)
 Frame = -1

Query: 150 PNPSPSFVEPCIVSDPNLPGASPPERQVKLVSRMMGNYLLRFGEDSAVS 4
           PNP+PSFVE CI             RQVKLVSRMMGNYLLRFGEDSA++
Sbjct: 404 PNPTPSFVELCI-------------RQVKLVSRMMGNYLLRFGEDSAIT 439


>ref|XP_002531741.1| conserved hypothetical protein [Ricinus communis]
           gi|223528644|gb|EEF30661.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 234

 Score = 47.0 bits (110), Expect(2) = 8e-06
 Identities = 25/36 (69%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = -3

Query: 511 ANPCPVSGRAKGGFNPYSLSPSQPRLMGPS-LIQGG 407
           ANPCPV GRAK G +PYS SPS PRL   + LIQGG
Sbjct: 118 ANPCPVPGRAK-GLHPYSFSPSSPRLRKEALLIQGG 152



 Score = 30.4 bits (67), Expect(2) = 8e-06
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = -2

Query: 428 AVTYSGGRVGPREALLRGRSL 366
           A+   GGRV PREALLR RSL
Sbjct: 146 ALLIQGGRVKPREALLRERSL 166


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