BLASTX nr result
ID: Cinnamomum23_contig00037467
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00037467
(258 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I sub... 123 4e-26
ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub... 122 9e-26
gb|AFK41205.1| unknown [Lotus japonicus] 114 2e-23
gb|AES82057.2| A49-like RNA polymerase I associated factor [Medi... 112 7e-23
ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 ... 112 7e-23
ref|XP_010087702.1| DNA-directed RNA polymerase I subunit rpa49 ... 110 5e-22
ref|XP_003595057.1| DNA-directed RNA polymerase I subunit rpa49 ... 110 5e-22
ref|XP_003595059.1| DNA-directed RNA polymerase I subunit rpa49 ... 110 5e-22
ref|XP_003595058.1| DNA-directed RNA polymerase I subunit rpa49 ... 110 5e-22
gb|AFK43436.1| unknown [Medicago truncatula] 109 6e-22
gb|KEH37431.1| A49-like RNA polymerase I associated factor [Medi... 108 2e-21
ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603... 108 2e-21
ref|XP_003595020.1| DNA-directed RNA polymerase I subunit rpa49 ... 108 2e-21
gb|ABN05937.1| hypothetical protein MtrDRAFT_AC149130g57v2 [Medi... 108 2e-21
ref|XP_004240985.1| PREDICTED: DNA-directed RNA polymerase I sub... 107 2e-21
ref|XP_007215426.1| hypothetical protein PRUPE_ppa006096mg [Prun... 107 3e-21
ref|XP_008228244.1| PREDICTED: DNA-directed RNA polymerase I sub... 107 4e-21
ref|XP_012573983.1| PREDICTED: DNA-directed RNA polymerase I sub... 104 2e-20
ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616... 104 2e-20
ref|XP_006426598.1| hypothetical protein CICLE_v10025597mg [Citr... 104 2e-20
>ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Eucalyptus
grandis] gi|629104338|gb|KCW69807.1| hypothetical
protein EUGRSUZ_F03167 [Eucalyptus grandis]
Length = 415
Score = 123 bits (309), Expect = 4e-26
Identities = 60/83 (72%), Positives = 72/83 (86%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
STMF+ +ES+ LPSEKIDLLISYVLVLTLF+D+FRTD DIAKDLRM+ VT+R+ +E LG
Sbjct: 327 STMFSNAESKWLPSEKIDLLISYVLVLTLFADDFRTDPTDIAKDLRMSSVTIRQHFEHLG 386
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK SR+ N++YA LPVPLKFP L
Sbjct: 387 CKFSREKNVLYAKLPVPLKFPEL 409
>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like
[Glycine max] gi|734359966|gb|KHN15333.1| DNA-directed
RNA polymerase I subunit rpa49 [Glycine soja]
Length = 424
Score = 122 bits (306), Expect = 9e-26
Identities = 62/83 (74%), Positives = 67/83 (80%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
S MF SES+RLP EKI LLI YVLVLTLFSDEFRTDY DIAKDL M + +R+ YE LG
Sbjct: 335 SNMFAVSESKRLPPEKISLLICYVLVLTLFSDEFRTDYTDIAKDLSMNILPVRQLYEHLG 394
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CKISRQ N+ YATLPVPLKFP L
Sbjct: 395 CKISRQKNIFYATLPVPLKFPEL 417
>gb|AFK41205.1| unknown [Lotus japonicus]
Length = 347
Score = 114 bits (285), Expect = 2e-23
Identities = 55/82 (67%), Positives = 69/82 (84%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
S+MF A+ESRRLP+++++LLI YVLVLTLFSDEFRTDY DI+KDLRM+ + +R+ Y LG
Sbjct: 258 SSMFGATESRRLPNDELNLLICYVLVLTLFSDEFRTDYTDISKDLRMSVLLVRQHYSDLG 317
Query: 77 CKISRQNNMIYATLPVPLKFPN 12
CK QN + YATLPVPLKFP+
Sbjct: 318 CKFLSQNKISYATLPVPLKFPD 339
>gb|AES82057.2| A49-like RNA polymerase I associated factor [Medicago truncatula]
Length = 429
Score = 112 bits (281), Expect = 7e-23
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
+ MF SESRRLP EK++LLISYVLVLTLFSD+FRTDY DIAKDLRM +TLR +E LG
Sbjct: 336 TAMFDVSESRRLPPEKLNLLISYVLVLTLFSDDFRTDYRDIAKDLRMTTLTLRPIFEHLG 395
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK+ + YATLP+PL FP +
Sbjct: 396 CKLISSQKVSYATLPIPLTFPQI 418
>ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
Length = 412
Score = 112 bits (281), Expect = 7e-23
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
+ MF SESRRLP EK++LLISYVLVLTLFSD+FRTDY DIAKDLRM +TLR +E LG
Sbjct: 319 TAMFDVSESRRLPPEKLNLLISYVLVLTLFSDDFRTDYRDIAKDLRMTTLTLRPIFEHLG 378
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK+ + YATLP+PL FP +
Sbjct: 379 CKLISSQKVSYATLPIPLTFPQI 401
>ref|XP_010087702.1| DNA-directed RNA polymerase I subunit rpa49 [Morus notabilis]
gi|587839011|gb|EXB29690.1| DNA-directed RNA polymerase
I subunit rpa49 [Morus notabilis]
Length = 438
Score = 110 bits (274), Expect = 5e-22
Identities = 54/83 (65%), Positives = 68/83 (81%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
S MF +SE ++L S++ DLLISYVLVLTL++D F+T+ DIAKDLRM VTLR YE LG
Sbjct: 349 SAMFLSSEVKKLASKENDLLISYVLVLTLYADRFQTNLTDIAKDLRMTSVTLRVHYEQLG 408
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK+ RQNN+ +ATLPVPL+FP+L
Sbjct: 409 CKLVRQNNLWFATLPVPLQFPDL 431
>ref|XP_003595057.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
gi|217073572|gb|ACJ85146.1| unknown [Medicago
truncatula] gi|355484105|gb|AES65308.1| A49-like RNA
polymerase I associated factor [Medicago truncatula]
gi|388522465|gb|AFK49294.1| unknown [Medicago
truncatula]
Length = 428
Score = 110 bits (274), Expect = 5e-22
Identities = 54/83 (65%), Positives = 65/83 (78%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
+TMF +ESRRLP EK++LLISYVLVLTLFSD+FRTDY DIAKDLRM +TLR +E LG
Sbjct: 335 TTMFDVTESRRLPPEKMNLLISYVLVLTLFSDDFRTDYRDIAKDLRMTTLTLRPIFEHLG 394
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK+ + YATLP+PL F +
Sbjct: 395 CKLISSQKVSYATLPIPLTFSQI 417
>ref|XP_003595059.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
Length = 263
Score = 110 bits (274), Expect = 5e-22
Identities = 54/83 (65%), Positives = 65/83 (78%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
+TMF +ESRRLP EK++LLISYVLVLTLFSD+FRTDY DIAKDLRM +TLR +E LG
Sbjct: 170 TTMFDVTESRRLPPEKMNLLISYVLVLTLFSDDFRTDYRDIAKDLRMTTLTLRPIFEHLG 229
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK+ + YATLP+PL F +
Sbjct: 230 CKLISSQKVSYATLPIPLTFSQI 252
>ref|XP_003595058.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
Length = 411
Score = 110 bits (274), Expect = 5e-22
Identities = 54/83 (65%), Positives = 65/83 (78%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
+TMF +ESRRLP EK++LLISYVLVLTLFSD+FRTDY DIAKDLRM +TLR +E LG
Sbjct: 318 TTMFDVTESRRLPPEKMNLLISYVLVLTLFSDDFRTDYRDIAKDLRMTTLTLRPIFEHLG 377
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK+ + YATLP+PL F +
Sbjct: 378 CKLISSQKVSYATLPIPLTFSQI 400
>gb|AFK43436.1| unknown [Medicago truncatula]
Length = 263
Score = 109 bits (273), Expect = 6e-22
Identities = 54/80 (67%), Positives = 64/80 (80%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
+TMF +ESRRLP EK++LLISYVLVLTLFSD+FRTDY DIAKDLRM +TLR +E LG
Sbjct: 170 TTMFDVTESRRLPPEKMNLLISYVLVLTLFSDDFRTDYRDIAKDLRMTTLTLRPIFEHLG 229
Query: 77 CKISRQNNMIYATLPVPLKF 18
CK+ + YATLP+PL F
Sbjct: 230 CKLISSQKVSYATLPIPLTF 249
>gb|KEH37431.1| A49-like RNA polymerase I associated factor [Medicago truncatula]
Length = 332
Score = 108 bits (269), Expect = 2e-21
Identities = 53/83 (63%), Positives = 64/83 (77%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
+TMF +ESRRLP EK++LLISYVLVLTLFSD+FRTDY DI KDLRM+ +TLR +E LG
Sbjct: 239 TTMFDVTESRRLPPEKMNLLISYVLVLTLFSDDFRTDYRDIVKDLRMSTLTLRPIFEHLG 298
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK + YATLP+PL F +
Sbjct: 299 CKFISSQKVSYATLPIPLTFSQI 321
>ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603859 [Solanum tuberosum]
Length = 431
Score = 108 bits (269), Expect = 2e-21
Identities = 51/83 (61%), Positives = 69/83 (83%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
++MF+ S+S+RLP EK+ LLI+YVLVLTLF+D+FR+D +DIAKDLR+ V LR YE LG
Sbjct: 343 TSMFSISDSKRLPEEKVTLLINYVLVLTLFADDFRSDPSDIAKDLRINAVALRPFYEYLG 402
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK+ R+ N++ ATLPVPL FP++
Sbjct: 403 CKLVREKNVVLATLPVPLVFPSV 425
>ref|XP_003595020.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
gi|355484068|gb|AES65271.1| A49-like RNA polymerase I
associated factor [Medicago truncatula]
Length = 419
Score = 108 bits (269), Expect = 2e-21
Identities = 53/83 (63%), Positives = 64/83 (77%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
+TMF +ESRRLP EK++LLISYVLVLTLFSD+FRTDY DI KDLRM+ +TLR +E LG
Sbjct: 326 TTMFDVTESRRLPPEKMNLLISYVLVLTLFSDDFRTDYRDIVKDLRMSTLTLRPIFEHLG 385
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK + YATLP+PL F +
Sbjct: 386 CKFISSQKVSYATLPIPLTFSQI 408
>gb|ABN05937.1| hypothetical protein MtrDRAFT_AC149130g57v2 [Medicago truncatula]
Length = 243
Score = 108 bits (269), Expect = 2e-21
Identities = 53/83 (63%), Positives = 64/83 (77%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
+TMF +ESRRLP EK++LLISYVLVLTLFSD+FRTDY DI KDLRM+ +TLR +E LG
Sbjct: 150 TTMFDVTESRRLPPEKMNLLISYVLVLTLFSDDFRTDYRDIVKDLRMSTLTLRPIFEHLG 209
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK + YATLP+PL F +
Sbjct: 210 CKFISSQKVSYATLPIPLTFSQI 232
>ref|XP_004240985.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Solanum
lycopersicum]
Length = 410
Score = 107 bits (268), Expect = 2e-21
Identities = 51/83 (61%), Positives = 68/83 (81%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
++MF+ S+S+RLP EK+ LLI+YVLVLTLF+D+FR+D +DIAKDLR+ V LR YE LG
Sbjct: 322 TSMFSISDSKRLPEEKVTLLINYVLVLTLFADDFRSDPSDIAKDLRINAVALRPFYEYLG 381
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK+ R+ N++ ATLPVPL FP +
Sbjct: 382 CKLVREKNIVLATLPVPLVFPGV 404
>ref|XP_007215426.1| hypothetical protein PRUPE_ppa006096mg [Prunus persica]
gi|462411576|gb|EMJ16625.1| hypothetical protein
PRUPE_ppa006096mg [Prunus persica]
Length = 427
Score = 107 bits (267), Expect = 3e-21
Identities = 54/83 (65%), Positives = 67/83 (80%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
STMF +ES+ L +EK +LLISYVLVLTLF DEF TD DIAKDLRM+ + LR+ YE LG
Sbjct: 337 STMFP-TESKGLSNEKTNLLISYVLVLTLFVDEFETDLTDIAKDLRMSAIALRKHYENLG 395
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK+ R+ N+++ATLPVPL+FP L
Sbjct: 396 CKLVRKRNVMFATLPVPLQFPQL 418
>ref|XP_008228244.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Prunus
mume]
Length = 427
Score = 107 bits (266), Expect = 4e-21
Identities = 54/83 (65%), Positives = 66/83 (79%)
Frame = -2
Query: 257 STMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLG 78
STMF ES+ L +EK +LLISYVLVLTLF DEF TD DIAKDLRM+ + LR+ YE LG
Sbjct: 337 STMFPM-ESKSLSNEKTNLLISYVLVLTLFVDEFETDLTDIAKDLRMSAIALRKHYENLG 395
Query: 77 CKISRQNNMIYATLPVPLKFPNL 9
CK+ R+ N+++ATLPVPL+FP L
Sbjct: 396 CKLVRKRNVMFATLPVPLQFPQL 418
>ref|XP_012573983.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 isoform X2
[Cicer arietinum]
Length = 348
Score = 104 bits (260), Expect = 2e-20
Identities = 55/82 (67%), Positives = 63/82 (76%)
Frame = -2
Query: 254 TMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLGC 75
TMF SES+RLP+EKI+LLISYVLVLTLF D F+TDY DIAKDLRM+ + LR YE LG
Sbjct: 260 TMFDVSESKRLPTEKINLLISYVLVLTLFIDGFQTDYKDIAKDLRMSLIPLRLLYEHLGG 319
Query: 74 KISRQNNMIYATLPVPLKFPNL 9
KI Q+ YA LP+PL FP L
Sbjct: 320 KIVFQDKKSYAILPIPLTFPEL 341
>ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616137 [Citrus sinensis]
gi|641846247|gb|KDO65131.1| hypothetical protein
CISIN_1g013236mg [Citrus sinensis]
Length = 447
Score = 104 bits (260), Expect = 2e-20
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = -2
Query: 254 TMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLGC 75
T F+ +ES+RL +KI LLISYVLVLTL +D+FRT+ DIAKDLRM+ LR +E LGC
Sbjct: 360 TSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMSEFKLRDHFEKLGC 419
Query: 74 KISRQNNMIYATLPVPLKFPNLV 6
K+ R+ NM+YATLPVPL+FP +
Sbjct: 420 KLLREKNMLYATLPVPLQFPKAI 442
>ref|XP_006426598.1| hypothetical protein CICLE_v10025597mg [Citrus clementina]
gi|557528588|gb|ESR39838.1| hypothetical protein
CICLE_v10025597mg [Citrus clementina]
Length = 426
Score = 104 bits (260), Expect = 2e-20
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = -2
Query: 254 TMFTASESRRLPSEKIDLLISYVLVLTLFSDEFRTDYNDIAKDLRMAGVTLRRRYELLGC 75
T F+ +ES+RL +KI LLISYVLVLTL +D+FRT+ DIAKDLRM+ LR +E LGC
Sbjct: 339 TSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMSEFKLRDHFEKLGC 398
Query: 74 KISRQNNMIYATLPVPLKFPNLV 6
K+ R+ NM+YATLPVPL+FP +
Sbjct: 399 KLLREKNMLYATLPVPLQFPKAI 421