BLASTX nr result

ID: Cinnamomum23_contig00037429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00037429
         (426 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012083233.1| PREDICTED: pentatricopeptide repeat-containi...    66   8e-09
ref|XP_002523370.1| pentatricopeptide repeat-containing protein,...    64   5e-08
gb|KDO86429.1| hypothetical protein CISIN_1g038364mg [Citrus sin...    61   3e-07
ref|XP_009757094.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06

>ref|XP_012083233.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial [Jatropha curcas]
          Length = 969

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 45/130 (34%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
 Frame = -2

Query: 371 IPMEKISPLYL--NTSLPQNPFTHKRNTSNPIIHVPRGVADTSMETXXXXXXSLGFPT-- 204
           I M+K+SP +   N  L QN  THK     P  H P  ++ T   T          P+  
Sbjct: 26  IAMDKLSPYHRHHNPPLNQNRLTHKHK---PRTHSPASLSVTPTSTSSETTPPFISPSPQ 82

Query: 203 ------HLHALNDTIKLNFPYSCKKIHAQIIKTSNYWNSTQTAQRLIHLYIQSDDFRSAA 42
                 ++  L+    +  P S K +HAQIIK  N W S    + LI  Y++  DFRSA 
Sbjct: 83  SQIHFPNIRFLDSISDVRSPASVKAMHAQIIKKCNNWKSDSKVKTLITSYLEVGDFRSAV 142

Query: 41  MVLFMGFERD 12
           MV F+GF R+
Sbjct: 143 MVFFVGFARN 152


>ref|XP_002523370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537458|gb|EEF39086.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
 Frame = -2

Query: 365 MEKISPLY--LNTSLPQNPFTHK---RNTSNPIIHVPRGVADTSMETXXXXXXSLGFPT- 204
           M+K++P Y   N  L QNP TH    R +S P + +      TS +T          P+ 
Sbjct: 1   MDKLAPFYSPYNPPLNQNPLTHNSKSRISSPPSLSL--APTPTSPDTTTTTTPLSASPSP 58

Query: 203 ------HLHALNDTIKLNFPYSCKKIHAQIIKTSNYWNSTQTAQRLIHLYIQSDDFRSAA 42
                    +L+ +  +    S   +HAQ+IKT + WNS   A+ LI  Y++  DFRS+A
Sbjct: 59  QQMNVPKFQSLDSSSDVKTLDSINAMHAQLIKTCSMWNSDSNARTLITSYLELGDFRSSA 118

Query: 41  MVLFMGFERD 12
           MV F+GF R+
Sbjct: 119 MVFFVGFARN 128


>gb|KDO86429.1| hypothetical protein CISIN_1g038364mg [Citrus sinensis]
          Length = 1076

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 4/140 (2%)
 Frame = -2

Query: 422 YYVSSSSFHQILDCNGRIPMEKISPLY----LNTSLPQNPFTHKRNTSNPIIHVPRGVAD 255
           YY++     Q+   N  I M K+  +Y      TS+ QN  +HK N+   I + P  +A 
Sbjct: 120 YYIACVGSSQLTRQNTAIVMPKLHSIYHHFNTRTSINQNRHSHKPNS---ITNSPTSLAL 176

Query: 254 TSMETXXXXXXSLGFPTHLHALNDTIKLNFPYSCKKIHAQIIKTSNYWNSTQTAQRLIHL 75
              +T           +    LN+T K     S K  HAQ+IK    WNS    + LI  
Sbjct: 177 PPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH 236

Query: 74  YIQSDDFRSAAMVLFMGFER 15
           Y++  DF SAA   F+ F R
Sbjct: 237 YLEFGDFTSAAKAFFLYFSR 256


>ref|XP_009757094.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial [Nicotiana sylvestris]
           gi|698520562|ref|XP_009757095.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial [Nicotiana sylvestris]
          Length = 931

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
 Frame = -2

Query: 365 MEKISPLYLNTSLPQNPFTHKR----NTSNPIIHVPRGVADTSMETXXXXXXSLGFP--T 204
           ME  +PLY   S  Q PFT K+    +T+  +++V   +++TS  T      SL F    
Sbjct: 1   MEAATPLYHFISSHQ-PFTQKQPRRYSTNFGLVNVAETLSETSPSTSPSPLSSLQFDYEK 59

Query: 203 HLHALNDTIKLNFPYSCKKIHAQIIKTSNYWNSTQTAQRLIHLYIQSDDFRSAAMVLFMG 24
             H+LN         S + +HA++IK S+ W+S +  Q  I  Y++  DF+SAA++ F+G
Sbjct: 60  EFHSLN---------SVRAMHAKMIKLSSVWDSKRNMQSFISAYLEFGDFQSAAVLFFVG 110

Query: 23  FERDPL 6
           F  + L
Sbjct: 111 FAENYL 116


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