BLASTX nr result
ID: Cinnamomum23_contig00037013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00037013
(269 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008792220.1| PREDICTED: DNA polymerase alpha subunit B [P... 81 2e-13
ref|XP_010930061.1| PREDICTED: DNA polymerase alpha subunit B [E... 79 1e-12
ref|XP_010250838.1| PREDICTED: DNA polymerase alpha subunit B is... 70 4e-10
ref|XP_010250837.1| PREDICTED: DNA polymerase alpha subunit B is... 70 4e-10
ref|XP_009392606.1| PREDICTED: DNA polymerase alpha subunit B [M... 65 2e-08
ref|XP_010103181.1| DNA polymerase alpha subunit B [Morus notabi... 64 3e-08
ref|XP_009797360.1| PREDICTED: DNA polymerase alpha subunit B [N... 63 9e-08
ref|XP_009610299.1| PREDICTED: DNA polymerase alpha subunit B [N... 61 3e-07
gb|KGN64070.1| hypothetical protein Csa_1G039840 [Cucumis sativus] 60 7e-07
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B [C... 60 7e-07
gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japo... 59 1e-06
gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indi... 59 1e-06
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B [S... 59 2e-06
ref|XP_008452343.1| PREDICTED: DNA polymerase alpha subunit B [C... 58 2e-06
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li... 58 2e-06
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B [F... 58 3e-06
ref|XP_009359309.1| PREDICTED: DNA polymerase alpha subunit B [P... 57 5e-06
ref|XP_006858888.1| PREDICTED: DNA polymerase alpha subunit B [A... 57 5e-06
ref|XP_011042296.1| PREDICTED: DNA polymerase alpha subunit B-li... 57 6e-06
ref|XP_011041564.1| PREDICTED: DNA polymerase alpha subunit B-li... 57 6e-06
>ref|XP_008792220.1| PREDICTED: DNA polymerase alpha subunit B [Phoenix dactylifera]
Length = 620
Score = 81.3 bits (199), Expect = 2e-13
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Frame = -3
Query: 264 EDREVVSFDTPVRQYEGSNLEPVSSTPATNERLSSST---LVVNRMTPFGQRTNKFVLQT 94
+D + +TP QYE +E +STP TNE SSS ++ NR+TPFGQR NKF+ Q
Sbjct: 102 DDTKESFLNTPSSQYEKQYVENYTSTPGTNEGPSSSKESKVISNRITPFGQRMNKFISQF 161
Query: 93 AFNSPDVNSSIKEEDSGNMEDDVIRRVRPRD 1
FN+ + ++ +++++ NMEDDVIRRV+P +
Sbjct: 162 VFNAQNTDNGLRKKELENMEDDVIRRVQPSE 192
>ref|XP_010930061.1| PREDICTED: DNA polymerase alpha subunit B [Elaeis guineensis]
Length = 620
Score = 79.0 bits (193), Expect = 1e-12
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Frame = -3
Query: 264 EDREVVSFDTPVRQYEGSNLEPVSSTPATNERLSSST---LVVNRMTPFGQRTNKFVLQT 94
+D + +TP QYE ++ +STP TN R SSS ++ NR+TPFGQR NKF+ Q
Sbjct: 102 DDAKESFLNTPSSQYEKQYVDNYTSTPGTNGRPSSSKESKVISNRITPFGQRMNKFISQF 161
Query: 93 AFNSPDVNSSIKEEDSGNMEDDVIRRVRPRD 1
+N+ + ++ +++ + NMEDDVIRRV+P +
Sbjct: 162 VYNAQNTDNGLRQNEVENMEDDVIRRVQPSE 192
>ref|XP_010250838.1| PREDICTED: DNA polymerase alpha subunit B isoform X2 [Nelumbo
nucifera]
Length = 624
Score = 70.5 bits (171), Expect = 4e-10
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Frame = -3
Query: 264 EDREVVSFDTPVRQYEGSNLEPVSSTPAT--NERLSS---STLVVNRMTPFGQRTNKFVL 100
ED + TP + E E TP T N R SS S L N MTPFGQRT+KFV+
Sbjct: 101 EDTKEGILGTPTDRPENIYPESFDITPGTTGNRRPSSGKPSRLASNNMTPFGQRTSKFVV 160
Query: 99 QTAFNSP-DVNSSIKEEDSGNMEDDVIRRVRP 7
Q+AFN+P D + +KE++ N E+D+IRRV+P
Sbjct: 161 QSAFNNPLDEGNDVKEQEIDNTENDIIRRVQP 192
>ref|XP_010250837.1| PREDICTED: DNA polymerase alpha subunit B isoform X1 [Nelumbo
nucifera]
Length = 625
Score = 70.5 bits (171), Expect = 4e-10
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Frame = -3
Query: 264 EDREVVSFDTPVRQYEGSNLEPVSSTPAT--NERLSS---STLVVNRMTPFGQRTNKFVL 100
ED + TP + E E TP T N R SS S L N MTPFGQRT+KFV+
Sbjct: 101 EDTKEGILGTPTDRPENIYPESFDITPGTTGNRRPSSGKPSRLASNNMTPFGQRTSKFVV 160
Query: 99 QTAFNSP-DVNSSIKEEDSGNMEDDVIRRVRP 7
Q+AFN+P D + +KE++ N E+D+IRRV+P
Sbjct: 161 QSAFNNPLDEGNDVKEQEIDNTENDIIRRVQP 192
>ref|XP_009392606.1| PREDICTED: DNA polymerase alpha subunit B [Musa acuminata subsp.
malaccensis]
Length = 621
Score = 65.1 bits (157), Expect = 2e-08
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Frame = -3
Query: 261 DREVVSFDTPVRQYEGSNLEPVSS--TPATNERLSSS---TLVVNRMTPFGQRTNKFVLQ 97
D V +TP QYE +++ +S TP T E L SS T + +R+TPFGQR +KF Q
Sbjct: 102 DSTVGILNTPNSQYEKLHVDTYNSVSTPKTKENLLSSKDATDISSRITPFGQRISKFTSQ 161
Query: 96 TAFNSPDVNSSIKEEDSGNMEDDVIRRVR 10
FNS V + + ++ +MEDD+IRRV+
Sbjct: 162 FVFNSESVENRLSGQELNDMEDDIIRRVQ 190
>ref|XP_010103181.1| DNA polymerase alpha subunit B [Morus notabilis]
gi|587906931|gb|EXB94967.1| DNA polymerase alpha subunit
B [Morus notabilis]
Length = 670
Score = 64.3 bits (155), Expect = 3e-08
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = -3
Query: 237 TPVRQYEGSNLEPVSSTPATNERLSSSTLVVNRMTPFGQRTNKFVLQTAFNS-PDVNSSI 61
TP R + S E STP TN ++ SS +TPFGQRT KFV++ + NS P++ +
Sbjct: 111 TPTRNSQDSYSEQFDSTPQTNGKIFSSGKPSKLITPFGQRTQKFVVKFSINSMPNMENGE 170
Query: 60 KEEDSGNMEDDVIRRVRP 7
E D N EDDVIR+++P
Sbjct: 171 TELDPENNEDDVIRKIQP 188
>ref|XP_009797360.1| PREDICTED: DNA polymerase alpha subunit B [Nicotiana sylvestris]
Length = 617
Score = 62.8 bits (151), Expect = 9e-08
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = -3
Query: 264 EDREVVSFDTPVRQYEGSNLEPVSSTPATNERLSSSTLVVNRMTPFGQRTNKFVLQTAFN 85
ED + + TP + + S E +S TN +S+S + +TPFGQR NKFV+Q + N
Sbjct: 100 EDTKEIILGTPTDKRKSSQAETTASAQKTNGSISTSRKHLETITPFGQRRNKFVVQFSLN 159
Query: 84 SPDVNSSIK-EEDSGNMEDDVIRRVRP 7
S+K E D N DD+I+RV+P
Sbjct: 160 EKANGESMKIEHDQENPNDDIIKRVQP 186
>ref|XP_009610299.1| PREDICTED: DNA polymerase alpha subunit B [Nicotiana
tomentosiformis]
Length = 617
Score = 61.2 bits (147), Expect = 3e-07
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = -3
Query: 264 EDREVVSFDTPVRQYEGSNLEPVSSTPATNERLSSSTLVVNRMTPFGQRTNKFVLQTAFN 85
ED + + TP + + S E +S TN +S+S + +TPFGQR NKFV+Q + N
Sbjct: 100 EDTKEIILGTPTDKQKSSQAETTASAQKTNGSISTSRKHLETITPFGQRRNKFVVQFSLN 159
Query: 84 SPDVNSSIK-EEDSGNMEDDVIRRVRP 7
S+ E D N DD+I+RV+P
Sbjct: 160 EKANEESMNIEHDQENPNDDIIKRVQP 186
>gb|KGN64070.1| hypothetical protein Csa_1G039840 [Cucumis sativus]
Length = 739
Score = 59.7 bits (143), Expect = 7e-07
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = -3
Query: 264 EDREVVSFDTPVRQYEGSNLEPVSSTPATNERLSSSTLVVNRMTPFGQRTNKFVLQTAFN 85
ED TP + + + E + TP TNE L SS TPFGQRT KFV++ N
Sbjct: 219 EDLNEDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHETPFGQRTEKFVVRFNIN 278
Query: 84 S-PDVNSSIKEEDSGNMEDDVIRRVRP 7
+ PD+ +++K ++S N ED +I++VRP
Sbjct: 279 NMPDMVTAVKVDNSENDEDTIIKKVRP 305
>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B [Cucumis sativus]
gi|778657094|ref|XP_011650247.1| PREDICTED: DNA
polymerase alpha subunit B [Cucumis sativus]
gi|778657099|ref|XP_011650259.1| PREDICTED: DNA
polymerase alpha subunit B [Cucumis sativus]
Length = 622
Score = 59.7 bits (143), Expect = 7e-07
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = -3
Query: 264 EDREVVSFDTPVRQYEGSNLEPVSSTPATNERLSSSTLVVNRMTPFGQRTNKFVLQTAFN 85
ED TP + + + E + TP TNE L SS TPFGQRT KFV++ N
Sbjct: 102 EDLNEDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHETPFGQRTEKFVVRFNIN 161
Query: 84 S-PDVNSSIKEEDSGNMEDDVIRRVRP 7
+ PD+ +++K ++S N ED +I++VRP
Sbjct: 162 NMPDMVTAVKVDNSENDEDTIIKKVRP 188
>gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japonica Group]
Length = 625
Score = 58.9 bits (141), Expect = 1e-06
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Frame = -3
Query: 240 DTPVRQYEGSNLEPVSS--TPATNERLSSSTLVV---NRMTPFGQRTNKFVLQTAFNSPD 76
DTP + E N E +S TP T +R SSS L +R+TPF QR NKF Q NS +
Sbjct: 114 DTPSTKQEKPNGESCNSELTPLTTDRPSSSRLAKTNGDRITPFSQRVNKFTQQYVLNSDN 173
Query: 75 VNSSIKEEDSGNMEDDVIRRVRP 7
V S +++ + ED+VIRRV+P
Sbjct: 174 VASVPSKDEIESTEDEVIRRVQP 196
>gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indica Group]
Length = 625
Score = 58.9 bits (141), Expect = 1e-06
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Frame = -3
Query: 240 DTPVRQYEGSNLEPVSS--TPATNERLSSSTLVV---NRMTPFGQRTNKFVLQTAFNSPD 76
DTP + E N E +S TP T +R SSS L +R+TPF QR NKF Q NS +
Sbjct: 114 DTPSTKQEKPNGESCNSELTPLTTDRPSSSRLAKTNGDRITPFSQRVNKFTQQYVLNSDN 173
Query: 75 VNSSIKEEDSGNMEDDVIRRVRP 7
V S +++ + ED+VIRRV+P
Sbjct: 174 VASVPSKDEIESTEDEVIRRVQP 196
>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B [Solanum lycopersicum]
Length = 617
Score = 58.5 bits (140), Expect = 2e-06
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = -3
Query: 264 EDREVVSFDTPVRQYEGSNLEPVSSTPATNERLSSSTLVVNRMTPFGQRTNKFVLQTAFN 85
E+ + + TP + + S E + S TN +S+S + +TPFGQR NKFV+Q N
Sbjct: 100 ENTKDIILGTPTDKRKTSQTETIVSARKTNGSISTSRKHLETITPFGQRKNKFVVQFTLN 159
Query: 84 SPDVNSSIK-EEDSGNMEDDVIRRVRP 7
S+K E D N DD+I+RV+P
Sbjct: 160 ENANGESMKIENDEENPSDDIIKRVQP 186
>ref|XP_008452343.1| PREDICTED: DNA polymerase alpha subunit B [Cucumis melo]
gi|659066606|ref|XP_008452395.1| PREDICTED: DNA
polymerase alpha subunit B [Cucumis melo]
gi|659066608|ref|XP_008452468.1| PREDICTED: DNA
polymerase alpha subunit B [Cucumis melo]
gi|659066610|ref|XP_008452549.1| PREDICTED: DNA
polymerase alpha subunit B [Cucumis melo]
gi|659066612|ref|XP_008452631.1| PREDICTED: DNA
polymerase alpha subunit B [Cucumis melo]
Length = 622
Score = 58.2 bits (139), Expect = 2e-06
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = -3
Query: 264 EDREVVSFDTPVRQYEGSNLEPVSSTPATNERLSSSTLVVNRMTPFGQRTNKFVLQTAFN 85
ED TP + + + E + TP TN L SS TPFGQRT KFV++ N
Sbjct: 102 EDLNEDILKTPNGKSQSLHKERLDLTPYTNGGLFSSGKPSKHETPFGQRTEKFVVRFNIN 161
Query: 84 S-PDVNSSIKEEDSGNMEDDVIRRVRP 7
S PD+ ++ KE++S N ED +I++VRP
Sbjct: 162 SMPDMVTAEKEDNSENDEDAIIKKVRP 188
>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
Length = 617
Score = 58.2 bits (139), Expect = 2e-06
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = -3
Query: 264 EDREVVSFDTPVRQYEGSNLEPVSSTPATNERLSSSTLVVNRMTPFGQRTNKFVLQTAFN 85
E+ + + TP + + S E + S TN +S+S + +TPFGQR +KFV+Q N
Sbjct: 100 ENTKEIILGTPTDKRKTSQSETIVSARKTNGSISTSRKHLETITPFGQRKSKFVVQFTLN 159
Query: 84 SPDVNSSIK-EEDSGNMEDDVIRRVRP 7
S+K E D N+ DD+I+RV+P
Sbjct: 160 ENANGESMKIENDEENLNDDIIKRVQP 186
>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B [Fragaria vesca subsp.
vesca]
Length = 620
Score = 57.8 bits (138), Expect = 3e-06
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = -3
Query: 261 DREVVSFDTPVRQYEGSNLEPVSSTPATNERLSSSTLVVNRMTPFGQRTNKFVLQTAF-N 85
D E TP+ + + + STP TN + SS +TPFG+RT+KFV++ + N
Sbjct: 104 DIEETVLHTPISKSQNRYSDSFDSTPQTNGNVPSSGKPTKLITPFGRRTDKFVVKFSIEN 163
Query: 84 SPDVNSSIKEEDSGNM-EDDVIRRVRP 7
P+ + KE+++ N +DD+IRRV+P
Sbjct: 164 MPNTENVKKEDENENQDDDDIIRRVKP 190
>ref|XP_009359309.1| PREDICTED: DNA polymerase alpha subunit B [Pyrus x bretschneideri]
Length = 622
Score = 57.0 bits (136), Expect = 5e-06
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = -3
Query: 237 TPVRQYEGSNLEPVSSTPATNERLSSSTLVVNRMTPFGQRTNKFVLQTAF-NSPDVNSSI 61
TP + + EP STP T + SS +TPFGQRT+KFV++ N P + +
Sbjct: 111 TPPSESQNRYSEPSDSTPQTIGNVPSSGKPSRLVTPFGQRTDKFVVKFGIDNKPTIENGE 170
Query: 60 KEEDSGNMEDD-VIRRVRP 7
KE D+ N EDD +IR+V+P
Sbjct: 171 KEHDNENDEDDEIIRKVKP 189
>ref|XP_006858888.1| PREDICTED: DNA polymerase alpha subunit B [Amborella trichopoda]
gi|548862999|gb|ERN20355.1| hypothetical protein
AMTR_s00066p00201540 [Amborella trichopoda]
Length = 628
Score = 57.0 bits (136), Expect = 5e-06
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Frame = -3
Query: 264 EDREVVSFDTPVRQYEGSNLEPVSSTPATNERL----------SSSTLVVNRMTPFGQRT 115
+D E DTP++Q NL +S TP + +R SS ++ TPFGQRT
Sbjct: 102 KDGEEGMLDTPIKQSYFDNLNDLS-TPISMDRSPERNGKSISEKSSRRTSSQATPFGQRT 160
Query: 114 NKFVLQTAFNSPDVNSSIKEEDSGNMEDDVIRRVR 10
NKF+LQ +FNS K+ + + DDVIRRV+
Sbjct: 161 NKFLLQLSFNSHSKADDTKDLEIDALGDDVIRRVQ 195
>ref|XP_011042296.1| PREDICTED: DNA polymerase alpha subunit B-like [Populus euphratica]
Length = 618
Score = 56.6 bits (135), Expect = 6e-06
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = -3
Query: 237 TPVRQYEGSNLEPVSSTPATNERLSSSTLVVNRMTPFGQRTNKFVLQTAFNS-PDVNSSI 61
TP + N +P +STP + SS +TPFG+RT+KFV++ NS P V+++
Sbjct: 111 TPTDKSLKLNSDPFNSTPKSYGNGYSSGKPSKLVTPFGRRTDKFVVKFNINSLPVVDNND 170
Query: 60 KEEDSGNMEDDVIRRVRP 7
E D GN+ED++IRR +P
Sbjct: 171 GEHDHGNLEDEIIRRAQP 188
>ref|XP_011041564.1| PREDICTED: DNA polymerase alpha subunit B-like [Populus euphratica]
Length = 618
Score = 56.6 bits (135), Expect = 6e-06
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = -3
Query: 237 TPVRQYEGSNLEPVSSTPATNERLSSSTLVVNRMTPFGQRTNKFVLQTAFNS-PDVNSSI 61
TP + N +P +STP + SS +TPFG+RT+KFV++ NS P V+++
Sbjct: 111 TPTDKSLKLNSDPFNSTPKSYGNGYSSGKPSKLVTPFGRRTDKFVVKFNINSLPVVDNND 170
Query: 60 KEEDSGNMEDDVIRRVRP 7
E D GN+ED++IRR +P
Sbjct: 171 GEHDHGNLEDEIIRRAQP 188