BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00036471
         (405 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF,...    88   2e-15
ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF,...    88   2e-15
ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF,...    88   2e-15
ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF,...    79   2e-12
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,...    78   3e-12
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,...    78   3e-12
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr...    78   3e-12
gb|KDO48082.1| hypothetical protein CISIN_1g008352mg [Citrus sin...    76   8e-12
gb|KDO48081.1| hypothetical protein CISIN_1g008352mg [Citrus sin...    76   8e-12
gb|KDO48080.1| hypothetical protein CISIN_1g008352mg [Citrus sin...    76   8e-12
gb|KDO48079.1| hypothetical protein CISIN_1g008352mg [Citrus sin...    76   8e-12
gb|KDO48078.1| hypothetical protein CISIN_1g008352mg [Citrus sin...    76   8e-12
gb|KDO48077.1| hypothetical protein CISIN_1g008352mg [Citrus sin...    76   8e-12
gb|KDO48076.1| hypothetical protein CISIN_1g008352mg [Citrus sin...    76   8e-12
gb|KDO48073.1| hypothetical protein CISIN_1g008352mg [Citrus sin...    76   8e-12
gb|KDO48072.1| hypothetical protein CISIN_1g008352mg [Citrus sin...    76   8e-12
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,...    74   5e-11
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr...    74   5e-11
ref|XP_011018731.1| PREDICTED: RNA polymerase sigma factor sigF,...    73   8e-11
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr...    73   8e-11

>ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
           X3 [Nelumbo nucifera]
          Length = 540

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHLT-EDKTLQAILDRRRMENAVS 135
           HEQA   V S+ TTSI+RHFPASVL +EQ DD R  L +  EDKT QA+LDRR++E+ V 
Sbjct: 6   HEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDKVH 65

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWP 60
             EE+ S Q   + + FE QLLYWP
Sbjct: 66  LYEEKKSCQPDRYWEGFERQLLYWP 90


>ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
           X2 [Nelumbo nucifera]
          Length = 565

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHLT-EDKTLQAILDRRRMENAVS 135
           HEQA   V S+ TTSI+RHFPASVL +EQ DD R  L +  EDKT QA+LDRR++E+ V 
Sbjct: 31  HEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDKVH 90

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWP 60
             EE+ S Q   + + FE QLLYWP
Sbjct: 91  LYEEKKSCQPDRYWEGFERQLLYWP 115


>ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
           X1 [Nelumbo nucifera]
          Length = 568

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHLT-EDKTLQAILDRRRMENAVS 135
           HEQA   V S+ TTSI+RHFPASVL +EQ DD R  L +  EDKT QA+LDRR++E+ V 
Sbjct: 34  HEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDKVH 93

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWP 60
             EE+ S Q   + + FE QLLYWP
Sbjct: 94  LYEEKKSCQPDRYWEGFERQLLYWP 118


>ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
           X4 [Nelumbo nucifera]
          Length = 525

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = -2

Query: 281 LQTTSISRHFPASVLCREQCDDFRLSLHLT-EDKTLQAILDRRRMENAVSSCEEQNSHQY 105
           + TTSI+RHFPASVL +EQ DD R  L +  EDKT QA+LDRR++E+ V   EE+ S Q 
Sbjct: 1   MPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDKVHLYEEKKSCQP 60

Query: 104 HHHMKEFESQLLYWP 60
             + + FE QLLYWP
Sbjct: 61  DRYWEGFERQLLYWP 75


>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X2 [Citrus sinensis]
          Length = 569

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVS 135
           +EQ+A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R ME    
Sbjct: 40  NEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAF 99

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
             EE+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 100 FVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 135


>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X1 [Citrus sinensis]
          Length = 570

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVS 135
           +EQ+A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R ME    
Sbjct: 41  NEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAF 100

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
             EE+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 101 FVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 136


>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
           gi|557530788|gb|ESR41971.1| hypothetical protein
           CICLE_v10011376mg [Citrus clementina]
          Length = 569

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVS 135
           +EQ+A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R ME    
Sbjct: 40  NEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAF 99

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
             EE+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 100 FVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 135


>gb|KDO48082.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 532

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVS 135
           +EQ+A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R +E    
Sbjct: 3   NEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAF 62

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
             EE+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 63  FVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 98


>gb|KDO48081.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 378

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVS 135
           +EQ+A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R +E    
Sbjct: 40  NEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAF 99

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
             EE+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 100 FVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 135


>gb|KDO48080.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 361

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVS 135
           +EQ+A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R +E    
Sbjct: 40  NEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAF 99

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
             EE+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 100 FVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 135


>gb|KDO48079.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 428

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVS 135
           +EQ+A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R +E    
Sbjct: 40  NEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAF 99

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
             EE+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 100 FVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 135


>gb|KDO48078.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 429

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVS 135
           +EQ+A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R +E    
Sbjct: 40  NEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAF 99

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
             EE+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 100 FVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 135


>gb|KDO48077.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 488

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVS 135
           +EQ+A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R +E    
Sbjct: 40  NEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAF 99

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
             EE+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 100 FVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 135


>gb|KDO48076.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 482

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVS 135
           +EQ+A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R +E    
Sbjct: 40  NEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAF 99

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
             EE+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 100 FVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 135


>gb|KDO48073.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 473

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVS 135
           +EQ+A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R +E    
Sbjct: 40  NEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAF 99

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
             EE+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 100 FVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 135


>gb|KDO48072.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 569

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -2

Query: 311 HEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVS 135
           +EQ+A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R +E    
Sbjct: 40  NEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAF 99

Query: 134 SCEEQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
             EE+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 100 FVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 135


>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X3 [Citrus sinensis]
          Length = 561

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
 Frame = -2

Query: 302 AAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVSSCE 126
           +A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R ME      E
Sbjct: 35  SAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVE 94

Query: 125 EQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
           E+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 95  EKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 127


>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
           gi|557530789|gb|ESR41972.1| hypothetical protein
           CICLE_v10011376mg [Citrus clementina]
          Length = 561

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
 Frame = -2

Query: 302 AAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAVSSCE 126
           +A AV S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R ME      E
Sbjct: 35  SAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVE 94

Query: 125 EQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
           E+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 95  EKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 127


>ref|XP_011018731.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
           X2 [Populus euphratica]
          Length = 557

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
 Frame = -2

Query: 362 PTRHLXXXXXXXXXSVAHEQAAHAVTSLQTTSISRHFPASVLCREQCDDFR-LSLHLTED 186
           PTR            +  EQA  AVT++ TTS ++HFP SVL +EQ D+FR L     ED
Sbjct: 15  PTRTHLKNSLCSSVLILREQATPAVTAIPTTSTAQHFPTSVLLQEQRDEFRPLQNIFKED 74

Query: 185 KTLQAILDRRRMENAVSSCEEQNSHQYHHHMKEFESQLLYWPEF 54
           +  QA LDRR+ E   S  E ++S +    ++ FE QL +WP +
Sbjct: 75  RPSQATLDRRKTEIGTSGHEGKDSDELDQMVENFEYQLHHWPTY 118


>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
           gi|557530787|gb|ESR41970.1| hypothetical protein
           CICLE_v10011376mg [Citrus clementina]
          Length = 558

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
 Frame = -2

Query: 314 AHEQAAHAVTSLQTTSISRHFPASVLCREQCDDFRLSLHL-TEDKTLQAILDRRRMENAV 138
           A   ++ +V S+ T+S++RHFP SVL +EQ D++R  LH+  EDKT QA  D R ME   
Sbjct: 28  ASSSSSSSVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEA 87

Query: 137 SSCEEQNSHQYHHHMKEFESQLLYWPE-FHPHPQKKR 30
              EE+NS      +++ E Q L+WP+ ++  P  KR
Sbjct: 88  FFVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKR 124