BLASTX nr result

ID: Cinnamomum23_contig00036325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00036325
         (350 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                57   6e-06

>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 32/68 (47%), Positives = 41/68 (60%)
 Frame = +1

Query: 1   LRWFGHVKCKSMMT*VRKIFSMRVDDPTRTRGRLRRTWMEVIWIDLKK*SLSEDLAQDRP 180
           LRWFGHVK +S    VR+   M V+   R RGR ++ W EVI  DL    ++ED+  DR 
Sbjct: 622 LRWFGHVKRRSADAPVRRCEVMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLDRK 681

Query: 181 ERKSRIHV 204
           E +SRI V
Sbjct: 682 EWRSRIKV 689


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