BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00034301
         (289 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005846779.1| hypothetical protein CHLNCDRAFT_24450 [Chlor...    62   1e-07
gb|ABD37884.1| light-harvesting chlorophyll-a/b binding protein ...    62   1e-07
ref|XP_005644735.1| light harvesting complex a protein [Coccomyx...    59   2e-06

>ref|XP_005846779.1| hypothetical protein CHLNCDRAFT_24450 [Chlorella variabilis]
           gi|307106431|gb|EFN54677.1| hypothetical protein
           CHLNCDRAFT_24450 [Chlorella variabilis]
          Length = 189

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 2/47 (4%)
 Frame = -2

Query: 288 AFVGFGIQA--IVTEQGPIANLQSHLSAPFQNNIIGSIQNLPNVIGK 154
           AF+GF +QA  +VT +GP+  LQSHLS+PF+NN IGSI  LP+VIGK
Sbjct: 143 AFIGFCVQASALVTREGPVEALQSHLSSPFENNFIGSIAALPSVIGK 189


>gb|ABD37884.1| light-harvesting chlorophyll-a/b binding protein Lhca5.2
           [Mesostigma viride] gi|145079736|tpg|DAA05927.1|
           TPA_inf: chloroplast light-harvesting complex I protein
           precursor Lhca9 [Mesostigma viride]
          Length = 225

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = -2

Query: 288 AFVGFGIQAIVTEQGPIANLQSHLSAPFQNNIIGSIQNLPNVIGK 154
           A+ GF +QA+VT +GP+ NL+ H++ PF NN I SI NLPNV+GK
Sbjct: 181 AWCGFMVQALVTREGPVTNLEKHIADPFNNNFITSIANLPNVVGK 225


>ref|XP_005644735.1| light harvesting complex a protein [Coccomyxa subellipsoidea C-169]
           gi|384246702|gb|EIE20191.1| light harvesting complex a
           protein [Coccomyxa subellipsoidea C-169]
          Length = 230

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 30/44 (68%), Positives = 31/44 (70%)
 Frame = -2

Query: 288 AFVGFGIQAIVTEQGPIANLQSHLSAPFQNNIIGSIQNLPNVIG 157
           AFVGF   A+V  QGPI  LQSHLS PF NNIIGSI  LP  IG
Sbjct: 175 AFVGFVGAALVCRQGPIEALQSHLSDPFSNNIIGSIARLPETIG 218