BLASTX nr result
ID: Cinnamomum23_contig00033845
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00033845
(402 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010922037.1| PREDICTED: DNA-directed RNA polymerases II a... 105 9e-21
ref|XP_009386469.1| PREDICTED: DNA-directed RNA polymerases II a... 104 3e-20
ref|XP_008451219.1| PREDICTED: DNA-directed RNA polymerases II a... 103 3e-20
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases II a... 103 3e-20
ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ... 102 8e-20
gb|AES93610.2| DNA-directed RNA polymerase II [Medicago truncatula] 102 8e-20
ref|XP_008788537.1| PREDICTED: DNA-directed RNA polymerases II a... 102 1e-19
ref|XP_006858910.1| PREDICTED: DNA-directed RNA polymerases II a... 102 1e-19
ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases II a... 102 1e-19
ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II a... 102 1e-19
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [... 102 1e-19
ref|XP_010535925.1| PREDICTED: DNA-directed RNA polymerases II a... 101 2e-19
emb|CDP10286.1| unnamed protein product [Coffea canephora] 101 2e-19
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a... 101 2e-19
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases II a... 101 2e-19
ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Caps... 101 2e-19
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin... 101 2e-19
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin... 101 2e-19
ref|XP_001697601.1| DNA-directed RNA polymerase II, 23 kDa polyp... 101 2e-19
ref|XP_010274103.1| PREDICTED: DNA-directed RNA polymerases II a... 101 2e-19
>ref|XP_010922037.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
isoform X1 [Elaeis guineensis]
Length = 204
Score = 105 bits (263), Expect = 9e-21
Identities = 53/87 (60%), Positives = 67/87 (77%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
YH E+FQE EL+ N+ +HV VPKH LL++ EK LLERY LKETQLP+I VTD ARY G
Sbjct: 119 YHSEIFQEAELLINIKEHVLVPKHQLLTNEEKKTLLERYTLKETQLPRIQVTDPVARYYG 178
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YR+V+
Sbjct: 179 LKRGQVVKIIRPSETAGRY-VTYRYVV 204
>ref|XP_009386469.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Musa
acuminata subsp. malaccensis]
gi|695078182|ref|XP_009386470.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A [Musa acuminata
subsp. malaccensis] gi|695078184|ref|XP_009386471.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A [Musa acuminata subsp. malaccensis]
gi|695078186|ref|XP_009386472.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A [Musa acuminata
subsp. malaccensis]
Length = 207
Score = 104 bits (259), Expect = 3e-20
Identities = 52/89 (58%), Positives = 67/89 (75%)
Frame = -1
Query: 354 RSYHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARY 175
+ YH E+FQE EL+ N+ HV VP+H +L+S EK LLERY LKETQLP+I VTD ARY
Sbjct: 120 QKYHLEVFQEAELLVNIKDHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPIARY 179
Query: 174 IGACPGQVIRIMRPSTTAGQFVVVYRFVI 88
G GQV++I+RPS TAG++ V YR+V+
Sbjct: 180 YGLKRGQVVKIIRPSETAGRY-VTYRYVV 207
>ref|XP_008451219.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Cucumis melo]
Length = 207
Score = 103 bits (258), Expect = 3e-20
Identities = 51/89 (57%), Positives = 68/89 (76%)
Frame = -1
Query: 354 RSYHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARY 175
+S+H E+FQE EL+ N+ HV VP+H LL++ EK LLERY +KETQLP+I VTD ARY
Sbjct: 120 KSFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARY 179
Query: 174 IGACPGQVIRIMRPSTTAGQFVVVYRFVI 88
G GQV++I+RPS TAG++ V YR+V+
Sbjct: 180 YGLKRGQVVKIIRPSETAGRY-VTYRYVV 207
>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Cucumis sativus] gi|778727309|ref|XP_011659238.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like [Cucumis sativus]
gi|700189484|gb|KGN44717.1| hypothetical protein
Csa_7G374590 [Cucumis sativus]
Length = 207
Score = 103 bits (258), Expect = 3e-20
Identities = 51/89 (57%), Positives = 68/89 (76%)
Frame = -1
Query: 354 RSYHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARY 175
+S+H E+FQE EL+ N+ HV VP+H LL++ EK LLERY +KETQLP+I VTD ARY
Sbjct: 120 KSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARY 179
Query: 174 IGACPGQVIRIMRPSTTAGQFVVVYRFVI 88
G GQV++I+RPS TAG++ V YR+V+
Sbjct: 180 YGLKRGQVVKIIRPSETAGRY-VTYRYVV 207
>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Medicago truncatula]
Length = 410
Score = 102 bits (255), Expect = 8e-20
Identities = 50/87 (57%), Positives = 66/87 (75%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
+H E+FQE EL+ N+ +HV VP+H +L+ EK LLERY +KETQLP+I VTD ARY G
Sbjct: 325 FHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYG 384
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YRFV+
Sbjct: 385 LKRGQVVKIIRPSETAGRY-VTYRFVV 410
>gb|AES93610.2| DNA-directed RNA polymerase II [Medicago truncatula]
Length = 206
Score = 102 bits (255), Expect = 8e-20
Identities = 50/87 (57%), Positives = 66/87 (75%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
+H E+FQE EL+ N+ +HV VP+H +L+ EK LLERY +KETQLP+I VTD ARY G
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YRFV+
Sbjct: 181 LKRGQVVKIIRPSETAGRY-VTYRFVV 206
>ref|XP_008788537.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
isoform X1 [Phoenix dactylifera]
Length = 204
Score = 102 bits (254), Expect = 1e-19
Identities = 50/87 (57%), Positives = 65/87 (74%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
YH E+FQE EL+ N+ HV VP+H LL++ EK LLERY LKETQ P+I VTD ARY G
Sbjct: 119 YHLEIFQEAELLINIKDHVLVPEHQLLTNEEKKTLLERYTLKETQFPRIQVTDPVARYYG 178
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YR+++
Sbjct: 179 LKRGQVVKIIRPSETAGRY-VTYRYIV 204
>ref|XP_006858910.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Amborella trichopoda] gi|548863022|gb|ERN20377.1|
hypothetical protein AMTR_s00068p00034280 [Amborella
trichopoda]
Length = 206
Score = 102 bits (254), Expect = 1e-19
Identities = 50/87 (57%), Positives = 67/87 (77%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
+H E+FQE EL+ N+ +HV VP+H +L+S EK LLERY LKETQLP+I +TD ARY G
Sbjct: 121 FHLEIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYG 180
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YR+V+
Sbjct: 181 LKRGQVVKIIRPSETAGRY-VTYRYVV 206
>ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Cicer arietinum]
Length = 206
Score = 102 bits (254), Expect = 1e-19
Identities = 50/87 (57%), Positives = 66/87 (75%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
+H E+FQE EL+ N+ +HV VP+H +L+ EK LLERY +KETQLP+I VTD ARY G
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTETEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YRFV+
Sbjct: 181 LKRGQVVKIIRPSETAGRY-VTYRFVV 206
>ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Populus euphratica]
Length = 206
Score = 102 bits (253), Expect = 1e-19
Identities = 50/87 (57%), Positives = 67/87 (77%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
+H E+FQE EL+ N+ +HV VP+H +LS+ EK LLERY +KETQLP+I +TD ARY G
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYG 180
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YR+VI
Sbjct: 181 LKRGQVVKIIRPSETAGRY-VTYRYVI 206
>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 206
Score = 102 bits (253), Expect = 1e-19
Identities = 50/87 (57%), Positives = 67/87 (77%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
+H E+FQE EL+ N+ +HV VP+H +LS+ EK LLERY +KETQLP+I +TD ARY G
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYG 180
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YR+VI
Sbjct: 181 LKRGQVVKIIRPSETAGRY-VTYRYVI 206
>ref|XP_010535925.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Tarenaya hassleriana]
Length = 206
Score = 101 bits (252), Expect = 2e-19
Identities = 50/87 (57%), Positives = 66/87 (75%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
+H E+FQE EL+ N+ +HV VP H +L+S EK LLERY +KETQLP+I VTD ARY G
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPVHQVLASEEKRTLLERYTVKETQLPRIQVTDPVARYFG 180
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YR+V+
Sbjct: 181 LKRGQVVKIIRPSETAGRY-VTYRYVV 206
>emb|CDP10286.1| unnamed protein product [Coffea canephora]
Length = 206
Score = 101 bits (252), Expect = 2e-19
Identities = 50/87 (57%), Positives = 65/87 (74%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
+H E+FQE EL+ N+ HV VP+H LL+ EK LLERY +KETQLP+I +TD ARY G
Sbjct: 121 FHLEVFQEAELLVNIKNHVLVPEHQLLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YRFV+
Sbjct: 181 LKRGQVVKIIRPSETAGRY-VTYRFVV 206
>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 101 bits (252), Expect = 2e-19
Identities = 47/87 (54%), Positives = 66/87 (75%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
+H E+FQE E++ N+ HV +P+H+LLS EK LLERY +KETQLP+I +TD ARY G
Sbjct: 121 FHLEVFQEAEMLVNIKNHVLIPEHLLLSPEEKKSLLERYTVKETQLPRIQITDPIARYYG 180
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ + YR+V+
Sbjct: 181 LKRGQVVKIIRPSETAGRY-ITYRYVV 206
>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Cicer arietinum]
Length = 206
Score = 101 bits (252), Expect = 2e-19
Identities = 50/87 (57%), Positives = 65/87 (74%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
+H E+FQE EL+ N+ HV VP+H +L+ EK LLERY +KETQLP+I VTD ARY G
Sbjct: 121 FHLEVFQEAELLVNIKDHVLVPEHQVLTDTEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YRFV+
Sbjct: 181 LKRGQVVKIIRPSETAGRY-VTYRFVV 206
>ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Capsella rubella]
gi|482567281|gb|EOA31470.1| hypothetical protein
CARUB_v10014656mg [Capsella rubella]
Length = 205
Score = 101 bits (252), Expect = 2e-19
Identities = 49/87 (56%), Positives = 67/87 (77%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
+H E+FQE E++ N+ +HV VP+H +L+S EK LLERY +KETQLP+I VTD ARY G
Sbjct: 120 FHLEVFQEAEMLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVTDPIARYFG 179
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YR+V+
Sbjct: 180 LKRGQVVKIIRPSETAGRY-VTYRYVV 205
>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
gi|255627545|gb|ACU14117.1| unknown [Glycine max]
gi|734430825|gb|KHN45623.1| DNA-directed RNA polymerases
I, II, and III subunit RPABC1 [Glycine soja]
Length = 206
Score = 101 bits (252), Expect = 2e-19
Identities = 50/87 (57%), Positives = 66/87 (75%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
+H E+FQE EL+ N+ +H VP+H +L+ AEK LLERY +KETQLP+I VTD ARY G
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YRFV+
Sbjct: 181 LKRGQVVKIIRPSETAGRY-VTYRFVV 206
>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
gi|255625665|gb|ACU13177.1| unknown [Glycine max]
gi|734374743|gb|KHN20662.1| DNA-directed RNA polymerases
I, II, and III subunit RPABC1 [Glycine soja]
Length = 206
Score = 101 bits (252), Expect = 2e-19
Identities = 50/87 (57%), Positives = 66/87 (75%)
Frame = -1
Query: 348 YHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKETQLPKILVTDAQARYIG 169
+H E+FQE EL+ N+ +H VP+H +L+ AEK LLERY +KETQLP+I VTD ARY G
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
Query: 168 ACPGQVIRIMRPSTTAGQFVVVYRFVI 88
GQV++I+RPS TAG++ V YRFV+
Sbjct: 181 LKRGQVVKIIRPSETAGRY-VTYRFVV 206
>ref|XP_001697601.1| DNA-directed RNA polymerase II, 23 kDa polypeptide [Chlamydomonas
reinhardtii] gi|158274211|gb|EDO99994.1| DNA-directed
RNA polymerase II, 23 kDa polypeptide [Chlamydomonas
reinhardtii]
Length = 206
Score = 101 bits (252), Expect = 2e-19
Identities = 54/106 (50%), Positives = 70/106 (66%)
Frame = -1
Query: 402 PESFKSFMEENYNVDIRSYHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLK 223
P F F + YH E F E EL+ N+++HV VP+H +LS EK LL+RYK+K
Sbjct: 99 PSKFTPFAKSALEDMRPKYHIEHFLESELLVNITEHVLVPEHRILSPDEKRTLLDRYKIK 158
Query: 222 ETQLPKILVTDAQARYIGACPGQVIRIMRPSTTAGQFVVVYRFVIP 85
ETQLP+I +DA ARY+G GQV+RI+RPS TAG++ V YRF P
Sbjct: 159 ETQLPRIQASDAVARYLGLQRGQVVRIVRPSETAGRY-VTYRFCPP 203
>ref|XP_010274103.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Nelumbo nucifera] gi|720057870|ref|XP_010274104.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A [Nelumbo nucifera]
Length = 206
Score = 101 bits (251), Expect = 2e-19
Identities = 51/104 (49%), Positives = 72/104 (69%)
Frame = -1
Query: 399 ESFKSFMEENYNVDIRSYHFELFQEVELVENVSKHVSVPKHVLLSSAEKCKLLERYKLKE 220
++ +F + N +H E+FQE EL+ N+ +HV VP+H +L+S EK LLERY LKE
Sbjct: 104 QNLTAFAKTCINEIAAKFHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKE 163
Query: 219 TQLPKILVTDAQARYIGACPGQVIRIMRPSTTAGQFVVVYRFVI 88
TQLP+I + D ARY G GQV++I+RPS TAG++ V YR+V+
Sbjct: 164 TQLPRIQIGDPIARYYGLKRGQVVKIIRPSETAGRY-VTYRYVV 206