BLASTX nr result

ID: Cinnamomum23_contig00033763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00033763
         (1477 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69754.1| hypothetical protein VITISV_024938 [Vitis vinifera]    42   8e-12
emb|CAN69099.1| hypothetical protein VITISV_038316 [Vitis vinifera]    42   3e-06
emb|CAN77370.1| hypothetical protein VITISV_033119 [Vitis vinifera]    35   5e-06

>emb|CAN69754.1| hypothetical protein VITISV_024938 [Vitis vinifera]
          Length = 971

 Score = 42.0 bits (97), Expect(4) = 8e-12
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +3

Query: 642 IGKW*WRIGDRLVGLWNQVIVAKDGVSRNGWESQGPSSSY 761
           +GKW WR       LW QVI+AK G    GW S+ P+ ++
Sbjct: 699 LGKWIWRYACERENLWKQVILAKYGQEEYGWRSKKPNGAF 738



 Score = 34.3 bits (77), Expect(4) = 8e-12
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +2

Query: 812 ESIRFGVGSSNKMLF*LDTWVRDGTLAIQFP*LFIGACDRQVKFKIIWKE 961
           +S+   VG  NK+ F  D W     L+  FP LF  A DR    + +W +
Sbjct: 755 DSLELRVGKGNKIRFWTDVWCAGTXLSQSFPHLFALAVDRNATVEEMWDQ 804



 Score = 32.0 bits (71), Expect(4) = 8e-12
 Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
 Frame = +2

Query: 185 SVSRLNINFFKSW----GE--DVESSLAAICKNVGCKAYSLSVSCLGLRL-PRNAPKAM* 343
           + S L IN  KS     GE  D+E   A     VGC+  SLS   LGL L   N   +M 
Sbjct: 543 AASGLKINLSKSEIIPVGEVDDIEELAA----EVGCRVGSLSSQYLGLPLGAPNRASSMW 598

Query: 344 SGVLESIKEDTI--SGSYLSISLRKDHSFNHHSPTTLYTSCQVFKCPTLVVKHIERQ*HD 517
            GV E ++         Y+S   R     +  +   +Y    +F+ P +VV+ +E+   D
Sbjct: 599 DGVEERVRRRLALWKRQYISKGGRITLIKSTMASIPIY-QMSLFRMPNIVVRRLEKLQRD 657

Query: 518 FLQQVTDLNKK 550
           FL    ++ +K
Sbjct: 658 FLWGGGNMERK 668



 Score = 29.6 bits (65), Expect(4) = 8e-12
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 60  LQSGTQEAPIISNLQFVSENLIFCEVNDDRVKNV 161
           ++ G + A  IS+L F  + +IFCE N D + ++
Sbjct: 501 IREGGERALNISHLFFADDTIIFCEANKDHLSHL 534


>emb|CAN69099.1| hypothetical protein VITISV_038316 [Vitis vinifera]
          Length = 491

 Score = 42.0 bits (97), Expect(3) = 3e-06
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +3

Query: 642 IGKW*WRIGDRLVGLWNQVIVAKDGVSRNGWESQGPSSSY 761
           +GKW WR  +    LWNQVI  K G  R GW S     +Y
Sbjct: 284 LGKWVWRFANERKALWNQVIRGKYGEERGGWRSCETREAY 323



 Score = 30.4 bits (67), Expect(3) = 3e-06
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +2

Query: 815 SIRFGVGSSNKMLF*LDTWVRDGTLAIQFP*LFIGACDRQVKFKIIWKELTKWFGV--PC 988
           S  F VG   K+ F  D W     L+  FP LF  A +++     +W    +W G   PC
Sbjct: 341 SFGFVVGDGEKVKFWKDKWCETIPLSEAFPSLFALASNKEAWVNEVWTAEGEWGGSWNPC 400



 Score = 26.9 bits (58), Expect(3) = 3e-06
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
 Frame = +1

Query: 397 YLFKEG--SLIQSPLSNHLVYFMSGF*MPNLSSEAH*ETIT*LPSASYRLE*K--ITIWV 564
           Y+ K G  +L++S LSN  +YFM  F MP + S    +           LE K  +  W 
Sbjct: 201 YISKGGRITLVRSTLSNLPIYFMXIFQMPRVVSIRLEKIQRDFLWGGGTLEQKPHLVRWS 260

Query: 565 IGCLERKTKQDEGLSFRPLKQVNHA 639
           I CL+   K+  GL  + L   N A
Sbjct: 261 IVCLD---KRSGGLGVKSLGAFNRA 282


>emb|CAN77370.1| hypothetical protein VITISV_033119 [Vitis vinifera]
          Length = 1190

 Score = 34.7 bits (78), Expect(4) = 5e-06
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 642 IGKW*WRIGDRLVGLWNQVIVAKDGVSRNGWESQ 743
           +GKW WR       LW +VI  K G+   GW+S+
Sbjct: 824 LGKWIWRFAVEKDVLWKKVIGVKHGLEGGGWKSK 857



 Score = 28.9 bits (63), Expect(4) = 5e-06
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = +3

Query: 57  RLQSGTQEAPIISNLQFVSENLIFCEVNDDRVKNV 161
           RL+   +E  ++S+L F  + +IFCE + D++ ++
Sbjct: 625 RLRGRGEEEIMVSHLLFADDTIIFCEASKDQLTHL 659



 Score = 28.5 bits (62), Expect(4) = 5e-06
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 815  SIRFGVGSSNKMLF*LDTWVRDGTLAIQFP*LFIGACDRQVKFKIIW 955
            +++F VG  NK++F  D W  +  L+  FP +   A  R      +W
Sbjct: 881  NMKFKVGRGNKVMFWTDHWCGNEALSQAFPQICALAACRNAAVDEVW 927



 Score = 25.4 bits (54), Expect(4) = 5e-06
 Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
 Frame = +2

Query: 185  SVSRLNINFFKSWGEDVES--SLAAICKNVGCKAYSLSVSCLGLRL-PRNAPKAM*SGVL 355
            + S L IN  KS    V    ++  +   +GC+  S  V  LGL L  R+    M  GV 
Sbjct: 668  AASGLRINLAKSELIPVGEIDNVEEMAVELGCRIGSFPVKYLGLPLGARHKALPMWDGVE 727

Query: 356  ESIKEDTI--SGSYLSISLRKDHSFNHHSPTTLYTSCQVFKCPTLVVKHIERQ*HDFL 523
            E ++         YLS   R     +      +Y    +F+ P  VVK +E+   DFL
Sbjct: 728  ERMRRRLARWKRQYLSKGGRITLIKSTLVSIPIY-QMSIFRMPKSVVKRLEKLQRDFL 784


Top