BLASTX nr result

ID: Cinnamomum23_contig00033136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00033136
         (302 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008797395.1| PREDICTED: pentatricopeptide repeat-containi...    92   1e-16
ref|XP_010917389.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
ref|XP_009402034.1| PREDICTED: uncharacterized protein LOC103985...    84   3e-14
gb|ERM98117.1| hypothetical protein AMTR_s00095p00039180 [Ambore...    57   5e-06

>ref|XP_008797395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Phoenix dactylifera]
          Length = 769

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 51/98 (52%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
 Frame = -3

Query: 294 CSLIKFGLGGDAFVGSGLANFYANFYCFHEAMXXXXXXXXXXXXLINTMIGIFAKNGDLE 115
           C +IK+GLG  AFV +GL  FYA F    E M            L+NT+IG+ AK G+  
Sbjct: 170 CVIIKYGLGNSAFVANGLVEFYAKFGLLGEMMKVFDMLECKDIVLVNTVIGLLAKAGNFG 229

Query: 114 EAFLYLR-LVLASSLVPTRATFVNLLGAIDGYERSRQG 4
           EAF+  R  VLA S+VP RATFVNLLG I+GYE  RQG
Sbjct: 230 EAFVKFRDYVLAFSMVPNRATFVNLLGGINGYESLRQG 267


>ref|XP_010917389.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Elaeis guineensis]
          Length = 797

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 49/98 (50%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
 Frame = -3

Query: 294 CSLIKFGLGGDAFVGSGLANFYANFYCFHEAMXXXXXXXXXXXXLINTMIGIFAKNGDLE 115
           C +IK+GLG  AFV +GL  FYA F    E              L+NT+IG+  K G+ E
Sbjct: 170 CVIIKYGLGNSAFVANGLVEFYAKFGFLGEMKKVFDILECKDIVLVNTVIGLLGKAGNFE 229

Query: 114 EAFLYLR-LVLASSLVPTRATFVNLLGAIDGYERSRQG 4
           EAF+  R   LA S VPTRATFVNLLG I+GYE  R G
Sbjct: 230 EAFVKFRDYFLAFSTVPTRATFVNLLGGINGYESLRHG 267


>ref|XP_009402034.1| PREDICTED: uncharacterized protein LOC103985904 [Musa acuminata
            subsp. malaccensis]
          Length = 1671

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 46/97 (47%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
 Frame = -3

Query: 294  CSLIKFGLGGDAFVGSGLANFYANFYCFHEAMXXXXXXXXXXXXLINTMIGIFAKNGDLE 115
            C ++K+GLG  AFV SGLA FYA +    + M            L+N +IG+ AK G+LE
Sbjct: 1044 CVVVKYGLGDSAFVASGLAEFYAVYGLLSDVMKVFESLERKDIVLVNAVIGLLAKAGNLE 1103

Query: 114  EAF-LYLRLVLASSLVPTRATFVNLLGAIDGYERSRQ 7
            EAF ++   VLAS L+P RATFVN+L  IDG+E  R+
Sbjct: 1104 EAFKVFCNHVLASHLLPVRATFVNVLSGIDGFEFWRE 1140


>gb|ERM98117.1| hypothetical protein AMTR_s00095p00039180 [Amborella trichopoda]
          Length = 819

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
 Frame = -3

Query: 288 LIKFGLGGDAFVGSGLANFYANFYCFHEAMXXXXXXXXXXXXLINTMIGIFAKNGDLEEA 109
           LIK+ L  D  VGS L NFY N +  HEA+            ++NT+I   A++G+  +A
Sbjct: 190 LIKYKLDQDIHVGSSLINFYCNLHQIHEALKVFDELELKDVVIMNTVIACHAQSGNCAQA 249

Query: 108 FLYLRLVLASSLV-PTRATFVNLLGAIDGYERSRQGK 1
           F   R +++S    P RA+ V LL A+   +  + G+
Sbjct: 250 FQIFRQIMSSPFSRPARASLVALLTAVGNSKTPKHGE 286


Top