BLASTX nr result
ID: Cinnamomum23_contig00032883
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00032883
(429 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010451614.1| PREDICTED: (Z)-gamma-bisabolene synthase 1-l... 72 5e-26
gb|AHL77759.1| polyprotein [Prunus persica] 70 1e-24
emb|CDF77009.1| hypothetical transposable element-related protei... 70 2e-24
ref|XP_008240521.1| PREDICTED: uncharacterized protein LOC103339... 72 9e-24
emb|CAN73466.1| hypothetical protein VITISV_044336 [Vitis vinifera] 70 4e-22
ref|XP_007029527.1| Cysteine-rich RLK (RECEPTOR-like protein kin... 64 8e-22
emb|CAN64507.1| hypothetical protein VITISV_008916 [Vitis vinifera] 61 2e-21
ref|XP_008377445.1| PREDICTED: uncharacterized protein LOC103440... 65 8e-21
emb|CAN75761.1| hypothetical protein VITISV_037422 [Vitis vinifera] 67 1e-20
dbj|BAA22288.1| polyprotein [Oryza australiensis] 59 2e-20
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 59 3e-20
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] 59 3e-20
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group] 57 4e-20
emb|CAN64925.1| hypothetical protein VITISV_039686 [Vitis vinifera] 69 4e-20
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 59 6e-20
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 59 6e-20
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 60 6e-20
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 60 6e-20
ref|XP_008223780.1| PREDICTED: LIM domain kinase 1-like [Prunus ... 75 1e-19
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 55 2e-19
>ref|XP_010451614.1| PREDICTED: (Z)-gamma-bisabolene synthase 1-like [Camelina sativa]
Length = 796
Score = 71.6 bits (174), Expect(3) = 5e-26
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G VERYKARLVAKGF+Q EG+NY+ET+ PV KDS RIIMAL +D E
Sbjct: 52 GNVERYKARLVAKGFSQKEGINYSETFSPVSRKDSLRIIMALVAQYDLE 100
Score = 48.1 bits (113), Expect(3) = 5e-26
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKFDE 428
CKL +SIYGLKQASRQW+LKFDE
Sbjct: 137 CKLKKSIYGLKQASRQWYLKFDE 159
Score = 44.7 bits (104), Expect(3) = 5e-26
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFINADAPDMV 361
++VK AFLNGDL+E VYM QPE FI DMV
Sbjct: 104 MDVKTAFLNGDLQEEVYMRQPESFIIEGQEDMV 136
>gb|AHL77759.1| polyprotein [Prunus persica]
Length = 1363
Score = 69.7 bits (169), Expect(3) = 1e-24
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFD 261
G+++RYKARLVAKGFTQ EGV+YNET+ PV KDS R+IMAL FD
Sbjct: 898 GQIDRYKARLVAKGFTQQEGVDYNETFSPVSTKDSLRVIMALVALFD 944
Score = 48.1 bits (113), Expect(3) = 1e-24
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKFDE 428
CKL +SIYGLKQASRQW+LKFDE
Sbjct: 983 CKLQKSIYGLKQASRQWYLKFDE 1005
Score = 41.6 bits (96), Expect(3) = 1e-24
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFINADAPDMV 361
++VK AFLNG+L E +YM QP+GFI D+V
Sbjct: 950 MDVKTAFLNGNLIEEIYMKQPDGFIQKGEEDLV 982
>emb|CDF77009.1| hypothetical transposable element-related protein, partial [Boechera
divaricarpa]
Length = 1350
Score = 70.5 bits (171), Expect(3) = 2e-24
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G V+RYKARLVAKG+TQ EG++Y ET+ PV K+SFR IMAL H+D E
Sbjct: 886 GNVQRYKARLVAKGYTQKEGIDYKETFSPVSSKESFRTIMALVAHYDLE 934
Score = 45.1 bits (105), Expect(3) = 2e-24
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFINADAPDMV 361
++VK AFLNGD++E +YM QPE F++ D+ MV
Sbjct: 938 MDVKTAFLNGDIDETIYMEQPENFVSHDSKKMV 970
Score = 43.5 bits (101), Expect(3) = 2e-24
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKF 422
CKLN+SIYGLKQASRQW+ KF
Sbjct: 971 CKLNKSIYGLKQASRQWYHKF 991
>ref|XP_008240521.1| PREDICTED: uncharacterized protein LOC103339024 [Prunus mume]
Length = 625
Score = 71.6 bits (174), Expect(3) = 9e-24
Identities = 32/47 (68%), Positives = 40/47 (85%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFD 261
G ++R KARLVAKGFTQ EG++YNET+ P+F KDSFR+IMAL HF+
Sbjct: 378 GFIDRCKARLVAKGFTQREGIDYNETFSPIFTKDSFRVIMALVAHFN 424
Score = 42.7 bits (99), Expect(3) = 9e-24
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFI 337
+NVK AFLNG+L E +YM QPEGFI
Sbjct: 430 MNVKTAFLNGNLSEEIYMKQPEGFI 454
Score = 42.4 bits (98), Expect(3) = 9e-24
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +3
Query: 363 KLNRSIYGLKQASRQWFLKFDE 428
KL + IYGLKQASRQW+LKFDE
Sbjct: 464 KLEKFIYGLKQASRQWYLKFDE 485
>emb|CAN73466.1| hypothetical protein VITISV_044336 [Vitis vinifera]
Length = 162
Score = 69.7 bits (169), Expect(3) = 4e-22
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G +ERYKAR VAKGFTQ EG++Y ET+ PV +KDS II+AL HFD E
Sbjct: 40 GNIERYKARXVAKGFTQKEGIDYTETFSPVSKKDSLXIILALVAHFDLE 88
Score = 47.8 bits (112), Expect(3) = 4e-22
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFINADAPDMV 361
++VKIAFLNG+LEE VYM QPEGF ++D +V
Sbjct: 92 MDVKIAFLNGELEEEVYMKQPEGFPSSDGEQLV 124
Score = 33.9 bits (76), Expect(3) = 4e-22
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQW 410
CKL +SIYGLKQAS QW
Sbjct: 125 CKLKKSIYGLKQASCQW 141
>ref|XP_007029527.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao] gi|508718132|gb|EOY10029.1| Cysteine-rich RLK
(RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 376
Score = 63.9 bits (154), Expect(3) = 8e-22
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G +ERYKA LVAKGFTQ EG+NY +T+ P+ + DS +IMAL HF+ E
Sbjct: 97 GNIERYKAILVAKGFTQKEGINYMKTFSPISKIDSLHVIMALVAHFNLE 145
Score = 44.3 bits (103), Expect(3) = 8e-22
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFINADAPDMV 361
++VKIAFLNG+LEE VYM QPE F ++D +V
Sbjct: 149 MDVKIAFLNGNLEEKVYMKQPERFSSSDGEHLV 181
Score = 42.0 bits (97), Expect(3) = 8e-22
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKF 422
CKLN+SIYGL QAS QW+LKF
Sbjct: 182 CKLNKSIYGLTQASHQWYLKF 202
>emb|CAN64507.1| hypothetical protein VITISV_008916 [Vitis vinifera]
Length = 621
Score = 60.8 bits (146), Expect(3) = 2e-21
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G +E+YK RL+AK TQ EG+NY ET+ PV +KDS II+AL +FD E
Sbjct: 300 GNIEKYKVRLIAKRCTQKEGINYTETFSPVSKKDSVCIILALVAYFDLE 348
Score = 44.3 bits (103), Expect(3) = 2e-21
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFINADAPDMV 361
++VK FLNG+LEE VYM QPEGF ++D +V
Sbjct: 352 MDVKTTFLNGELEEEVYMKQPEGFPSSDGEQLV 384
Score = 43.9 bits (102), Expect(3) = 2e-21
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKF 422
CKL +SIYGLKQASRQW+LKF
Sbjct: 385 CKLKKSIYGLKQASRQWYLKF 405
>ref|XP_008377445.1| PREDICTED: uncharacterized protein LOC103440527 [Malus domestica]
Length = 411
Score = 64.7 bits (156), Expect(3) = 8e-21
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +1
Query: 115 F*GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFD 261
F G +ERYKAR VAKG+TQ EG++Y ET+ PV KDSFR ++AL +D
Sbjct: 246 FKGEIERYKARFVAKGYTQQEGIDYTETFSPVSTKDSFRFVLALVAPYD 294
Score = 42.7 bits (99), Expect(3) = 8e-21
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKFDE 428
CKL +SIYGLKQA RQW+L+F+E
Sbjct: 333 CKLRKSIYGLKQALRQWYLRFNE 355
Score = 39.3 bits (90), Expect(3) = 8e-21
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFINADAPDMV 361
++VKIAFLNG +EE YM +PEGF ++ ++V
Sbjct: 300 MDVKIAFLNGFMEEETYMKKPEGFKDSIGKELV 332
>emb|CAN75761.1| hypothetical protein VITISV_037422 [Vitis vinifera]
Length = 162
Score = 66.6 bits (161), Expect(3) = 1e-20
Identities = 31/51 (60%), Positives = 37/51 (72%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFECK 273
G +E YKAR VAKGFTQ EG++Y ET+ PV +KDS II+AL H D E K
Sbjct: 40 GNIEIYKARFVAKGFTQKEGIDYTETFSPVSKKDSLHIILALVAHLDLELK 90
Score = 42.4 bits (98), Expect(3) = 1e-20
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFINADAPDMV 361
++VK FLNG+LEE VYM QP+GF ++D ++
Sbjct: 92 MDVKTTFLNGELEEEVYMKQPKGFPSSDGEQLI 124
Score = 37.0 bits (84), Expect(3) = 1e-20
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQW 410
CKLN+SIY LKQASRQW
Sbjct: 125 CKLNKSIYNLKQASRQW 141
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 58.9 bits (141), Expect(3) = 2e-20
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G V YKARLVAKGF Q +GV+Y+ET+ PV S RII+A+ +FD+E
Sbjct: 853 GNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYE 901
Score = 44.3 bits (103), Expect(3) = 2e-20
Identities = 17/33 (51%), Positives = 27/33 (81%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFINADAPDMV 361
++VK AFLNG+L E+VYM QP+GF++ ++P +
Sbjct: 905 MDVKTAFLNGNLSEDVYMIQPQGFVDPESPGKI 937
Score = 42.0 bits (97), Expect(3) = 2e-20
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKFDE 428
CKL +SIYGLKQASR W ++FDE
Sbjct: 938 CKLQKSIYGLKQASRSWNIRFDE 960
>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 58.5 bits (140), Expect(3) = 3e-20
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G V YKARLVAKGF Q +GV+Y+ET+ PV S RI++A+ +FD+E
Sbjct: 783 GNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYE 831
Score = 43.9 bits (102), Expect(3) = 3e-20
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 339 MQMLRIWCKLNRSIYGLKQASRQWFLKFDE 428
+Q ++ CKL +SIYGLKQASR W ++FDE
Sbjct: 861 LQSAKMICKLQKSIYGLKQASRSWNIRFDE 890
Score = 42.4 bits (98), Expect(3) = 3e-20
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFINADAPDMV 361
+ VK AFLNG+ +E+VYMTQP+GF++ + M+
Sbjct: 835 MEVKTAFLNGNHDEDVYMTQPKGFVDLQSAKMI 867
>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1063
Score = 58.5 bits (140), Expect(3) = 3e-20
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G V YKARLVAKGF Q +GV+Y+ET+ PV S RI++A+ +FD+E
Sbjct: 773 GNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYE 821
Score = 43.9 bits (102), Expect(3) = 3e-20
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 339 MQMLRIWCKLNRSIYGLKQASRQWFLKFDE 428
+Q ++ CKL +SIYGLKQASR W ++FDE
Sbjct: 851 LQSAKMICKLQKSIYGLKQASRSWNIRFDE 880
Score = 42.4 bits (98), Expect(3) = 3e-20
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFINADAPDMV 361
+ VK AFLNG+ +E+VYMTQP+GF++ + M+
Sbjct: 825 MEVKTAFLNGNHDEDVYMTQPKGFVDLQSAKMI 857
>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
Length = 923
Score = 57.4 bits (137), Expect(3) = 4e-20
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G V YKA+LVAKGF Q +GV+Y+ET+ P+ S RI++A+ +FD+E
Sbjct: 736 GNVHMYKAQLVAKGFRQIQGVDYDETFSPIAMLKSIRIVLAIAAYFDYE 784
Score = 45.1 bits (105), Expect(3) = 4e-20
Identities = 18/26 (69%), Positives = 26/26 (100%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFIN 340
++VKIAFLNG+L+E+VYMTQP+GF++
Sbjct: 788 MDVKIAFLNGNLDEDVYMTQPKGFVD 813
Score = 42.0 bits (97), Expect(3) = 4e-20
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKFDE 428
CKL +SIYGLKQASR W ++FDE
Sbjct: 821 CKLQKSIYGLKQASRSWNIRFDE 843
>emb|CAN64925.1| hypothetical protein VITISV_039686 [Vitis vinifera]
Length = 162
Score = 69.3 bits (168), Expect(3) = 4e-20
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G +ERYKARLVAKGFTQ G++Y ET+ PV +KDS II+AL HFD E
Sbjct: 40 GNIERYKARLVAKGFTQKXGIDYTETFSPVSKKDSLXIILALVAHFDLE 88
Score = 41.6 bits (96), Expect(3) = 4e-20
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFINADAPDMV 361
++VK FL G+LEE VYM QPEGF ++D +V
Sbjct: 92 MDVKTTFLXGELEEEVYMKQPEGFPSSDGEQLV 124
Score = 33.5 bits (75), Expect(3) = 4e-20
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 363 KLNRSIYGLKQASRQW 410
KL +SIYGLKQASRQW
Sbjct: 126 KLKKSIYGLKQASRQW 141
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 58.5 bits (140), Expect(3) = 6e-20
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G V YKARLVAKGF Q +GV+Y+ET+ PV S RI++A+ +FD+E
Sbjct: 776 GNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYE 824
Score = 43.1 bits (100), Expect(3) = 6e-20
Identities = 17/26 (65%), Positives = 25/26 (96%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFIN 340
++VK AFLNG+L+E+VYMTQP+GF++
Sbjct: 828 MDVKTAFLNGNLDEDVYMTQPKGFVD 853
Score = 42.0 bits (97), Expect(3) = 6e-20
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKFDE 428
CKL +SIYGLKQASR W ++FDE
Sbjct: 861 CKLQKSIYGLKQASRSWNIRFDE 883
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 58.5 bits (140), Expect(3) = 6e-20
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G V YKARLVAKGF Q +GV+Y+ET+ PV S RI++A+ +FD+E
Sbjct: 718 GNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYE 766
Score = 43.1 bits (100), Expect(3) = 6e-20
Identities = 17/26 (65%), Positives = 25/26 (96%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFIN 340
++VK AFLNG+L+E+VYMTQP+GF++
Sbjct: 770 MDVKTAFLNGNLDEDVYMTQPKGFVD 795
Score = 42.0 bits (97), Expect(3) = 6e-20
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKFDE 428
CKL +SIYGLKQASR W ++FDE
Sbjct: 803 CKLQKSIYGLKQASRSWNIRFDE 825
>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 60.5 bits (145), Expect(3) = 6e-20
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G V YKARLVAKGF Q +GVNY+ET+ PV S RI++A+ +FD+E
Sbjct: 407 GNVHIYKARLVAKGFRQIQGVNYDETFSPVAMLKSIRIVLAIAAYFDYE 455
Score = 42.0 bits (97), Expect(3) = 6e-20
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKFDE 428
CKL +SIYGLKQASR W ++FDE
Sbjct: 492 CKLQKSIYGLKQASRSWNIRFDE 514
Score = 41.2 bits (95), Expect(3) = 6e-20
Identities = 16/26 (61%), Positives = 25/26 (96%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFIN 340
++VK AFL+G+L+E+VYMTQP+GF++
Sbjct: 459 MDVKTAFLSGNLDEDVYMTQPKGFVD 484
>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 655
Score = 60.5 bits (145), Expect(3) = 6e-20
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G V YKARLVAKGF Q +GVNY+ET+ PV S RI++A+ +FD+E
Sbjct: 362 GNVHIYKARLVAKGFRQIQGVNYDETFSPVAMLKSIRIVLAIAAYFDYE 410
Score = 42.0 bits (97), Expect(3) = 6e-20
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKFDE 428
CKL +SIYGLKQASR W ++FDE
Sbjct: 447 CKLQKSIYGLKQASRSWNIRFDE 469
Score = 41.2 bits (95), Expect(3) = 6e-20
Identities = 16/26 (61%), Positives = 25/26 (96%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFIN 340
++VK AFL+G+L+E+VYMTQP+GF++
Sbjct: 414 MDVKTAFLSGNLDEDVYMTQPKGFVD 439
>ref|XP_008223780.1| PREDICTED: LIM domain kinase 1-like [Prunus mume]
Length = 759
Score = 74.7 bits (182), Expect(2) = 1e-19
Identities = 34/47 (72%), Positives = 41/47 (87%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFD 261
G+++RYKARLVAKG+TQ EGV+YNET+ PV KDSFR+IMAL HFD
Sbjct: 472 GQIDRYKARLVAKGYTQEEGVDYNETFSPVSTKDSFRVIMALVAHFD 518
Score = 48.1 bits (113), Expect(2) = 1e-19
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKFDE 428
CKL +SIYGLKQASRQW+LKFDE
Sbjct: 557 CKLQKSIYGLKQASRQWYLKFDE 579
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 55.1 bits (131), Expect(3) = 2e-19
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +1
Query: 121 GRVERYKARLVAKGFTQCEGVNYNETY*PVFEKDSFRIIMALTTHFDFE 267
G ++ YKA LVAKG+ Q G++Y+ETY PV S RI++A H+D+E
Sbjct: 500 GNIQIYKAGLVAKGYKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYE 548
Score = 44.7 bits (104), Expect(3) = 2e-19
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +2
Query: 263 LNVKIAFLNGDLEENVYMTQPEGFINADA 349
++VK AFLNG+LEE+VYMTQPEGF +A
Sbjct: 552 MDVKTAFLNGNLEEHVYMTQPEGFTVPEA 580
Score = 42.4 bits (98), Expect(3) = 2e-19
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 360 CKLNRSIYGLKQASRQWFLKFDE 428
CKL+RSIYGLKQASR W L+F+E
Sbjct: 585 CKLHRSIYGLKQASRSWNLRFNE 607