BLASTX nr result

ID: Cinnamomum23_contig00032823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00032823
         (429 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67506.1| hypothetical protein VITISV_026948 [Vitis vinifera]    40   6e-07
emb|CAN71205.1| hypothetical protein VITISV_025164 [Vitis vinifera]    40   1e-06
emb|CAN62921.1| hypothetical protein VITISV_032126 [Vitis vinifera]    43   4e-06
gb|KHN06274.1| Retrovirus-related Pol polyprotein from transposo...    39   5e-06
emb|CAN72951.1| hypothetical protein VITISV_020157 [Vitis vinifera]    39   5e-06

>emb|CAN67506.1| hypothetical protein VITISV_026948 [Vitis vinifera]
          Length = 1063

 Score = 40.0 bits (92), Expect(2) = 6e-07
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
 Frame = -2

Query: 419 LKTLFQSMFKNDDHLHFDCKVYLSSKRHCSVFLVVIESLILCFL*FIMMCGVMHPTFLLV 240
           LK LF S+F   D   F C +   +K H + FL+++      F+  ++   V  P+ +  
Sbjct: 249 LKKLFPSLFAKSDISDFRCDICELAKSHRASFLLILNKSSFPFM--VIHSDVWGPSKVPT 306

Query: 239 ITA----VTFLEDASQMTWYIYRKVR 174
           ++     VTF++D ++MTW    K +
Sbjct: 307 LSGSRWFVTFIDDCTRMTWLCLMKTK 332



 Score = 39.7 bits (91), Expect(2) = 6e-07
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = -3

Query: 166 SLTYKIFHEWVKQQFQTKIRIFRHDNDKEYLSKAFLECVQGESTES*ATCLYSPK 2
           +L +K FH+ ++ Q+  K+R+ R DN  EY S    + ++G       TC  +P+
Sbjct: 336 NLLFKKFHKMIETQYNAKVRVLRSDNGGEYQSSDLQKYLEGHGIIHQTTCSNTPQ 390


>emb|CAN71205.1| hypothetical protein VITISV_025164 [Vitis vinifera]
          Length = 929

 Score = 39.7 bits (91), Expect(2) = 1e-06
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
 Frame = -2

Query: 419 LKTLFQSMFKNDDHLHFDCKVYLSSKRHCSVFLVVIESLILCFL*FIMMCGVMHPTFLLV 240
           LK LF S+F   D   F C +   +K H + F +++   +  F+  ++   V  P+ +  
Sbjct: 237 LKKLFPSLFTKSDISGFHCDICELAKSHRASFPLILNKSLFPFM--VIHSDVWGPSKVXT 294

Query: 239 ITA----VTFLEDASQMTWYIYRKVR 174
           ++     VTF++D ++MTW    K +
Sbjct: 295 LSGSRWFVTFIDDCTRMTWLCLMKTK 320



 Score = 38.9 bits (89), Expect(2) = 1e-06
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -3

Query: 166 SLTYKIFHEWVKQQFQTKIRIFRHDNDKEYLSKAFLECVQGESTES*ATCLYSPK 2
           +L ++ FH+ ++ Q+  K+R+ R DN  EY S    + ++G       TC  +P+
Sbjct: 324 NLLFQXFHKMIETQYNAKVRVLRSDNGGEYQSSDLQKYLEGHDIIHQTTCSNTPQ 378


>emb|CAN62921.1| hypothetical protein VITISV_032126 [Vitis vinifera]
          Length = 1085

 Score = 42.7 bits (99), Expect(2) = 4e-06
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = -3

Query: 166 SLTYKIFHEWVKQQFQTKIRIFRHDNDKEYLSKAFLECVQGESTES*ATCLYSPK 2
           +L +K FH+ ++ Q+  K+R+ R DND EY S    + ++G       TC  +P+
Sbjct: 296 NLLFKNFHKMIETQYNAKVRVLRSDNDGEYQSSDLQKYLEGHGIIHQTTCXNTPQ 350



 Score = 34.3 bits (77), Expect(2) = 4e-06
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
 Frame = -2

Query: 419 LKTLFQSMFKNDDHLHFDCKVYLSSKRHCSVFLVVIESLILCFL*FIMMCGVMH------ 258
           LK LF S+F   D   F C +   +K H   F +++      F+       V+H      
Sbjct: 209 LKKLFPSLFAKSDIYGFRCDICELAKSHRVSFPLILNKSPFAFM-------VIHSDVWGS 261

Query: 257 ---PTFLLVITAVTFLEDASQMTWYIYRKVR 174
              PT       VTF++D ++MTW    K +
Sbjct: 262 SKVPTLSGSRWFVTFIDDCTRMTWLCLMKTK 292


>gb|KHN06274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1353

 Score = 39.3 bits (90), Expect(2) = 5e-06
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
 Frame = -1

Query: 327 FPSSNRKSDSMFSIVYYDVW--SHAPNIPTGYHCCHL--FRRCISNDLVYLSKSKDDILL 160
           FP + ++ +S FSI++ D+W  S   +    Y    +  F RC     VYL K + ++L 
Sbjct: 472 FPKTVQRCNSAFSIIHSDIWGPSRVSSFGFRYFVTFIDEFSRCT---WVYLMKDRSELLP 528

Query: 159 PIKSFMNGLSNSFK 118
              SF+N + N FK
Sbjct: 529 IFMSFLNEIENQFK 542



 Score = 37.4 bits (85), Expect(2) = 5e-06
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -3

Query: 136 VKQQFQTKIRIFRHDNDKEYLSKAFLECVQGESTES*ATCLYSPK 2
           ++ QF+T I++FR DN KEY S  F   +  +     +TC ++P+
Sbjct: 537 IENQFKTTIQVFRSDNAKEYFSHDFSSLLSSKGILHQSTCPHTPQ 581


>emb|CAN72951.1| hypothetical protein VITISV_020157 [Vitis vinifera]
          Length = 644

 Score = 38.9 bits (89), Expect(2) = 5e-06
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
 Frame = -2

Query: 419 LKTLFQSMFKNDDHLHFDCKVYLSSKRHCSVFLVVIESLILCFL*FIMMCGVMHPTFLLV 240
           LK LF S+F   D   F C +   +K H + F +++   +  F+  ++   V  P+ +  
Sbjct: 187 LKKLFPSLFAKSDISGFRCDICELAKSHRASFPLILNKSLFPFM--VIHSDVWGPSKVST 244

Query: 239 ITA----VTFLEDASQMTWYIYRKVR 174
           ++     VTF++D ++MTW    K +
Sbjct: 245 LSGSCWFVTFIDDCTRMTWLYLMKTK 270



 Score = 37.7 bits (86), Expect(2) = 5e-06
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -3

Query: 166 SLTYKIFHEWVKQQFQTKIRIFRHDNDKEYLSKAFLECVQGESTES*ATCLYSPK 2
           +L ++ FH+ ++ Q+  K+R+ R DN  EY S    + ++G       TC  +P+
Sbjct: 274 NLLFQKFHKMIETQYNEKVRVLRSDNGGEYQSSNLQKYLEGHGIIHQTTCSNTPQ 328


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