BLASTX nr result

ID: Cinnamomum23_contig00032478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00032478
         (279 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010275265.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-14
ref|XP_008797547.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_010927442.1| PREDICTED: pentatricopeptide repeat-containi...    74   4e-11
ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi...    69   1e-09
ref|XP_002534168.1| pentatricopeptide repeat-containing protein,...    67   6e-09
ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ...    67   6e-09
gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatu...    67   6e-09
ref|XP_004503293.1| PREDICTED: pentatricopeptide repeat-containi...    66   8e-09
ref|XP_011084409.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
ref|XP_012853250.1| PREDICTED: pentatricopeptide repeat-containi...    64   5e-08
ref|XP_010031274.1| PREDICTED: pentatricopeptide repeat-containi...    64   5e-08
ref|XP_007160512.1| hypothetical protein PHAVU_002G328100g [Phas...    61   3e-07
gb|KDO62894.1| hypothetical protein CISIN_1g004024mg [Citrus sin...    61   3e-07
ref|XP_006490750.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
gb|KHN21662.1| Pentatricopeptide repeat-containing protein [Glyc...    60   4e-07
ref|XP_003524346.2| PREDICTED: pentatricopeptide repeat-containi...    60   6e-07
ref|XP_008453471.1| PREDICTED: pentatricopeptide repeat-containi...    60   7e-07
ref|XP_007151411.1| hypothetical protein PHAVU_004G044000g, part...    59   1e-06
ref|XP_011039111.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_010087050.1| hypothetical protein L484_012294 [Morus nota...    58   2e-06

>ref|XP_010275265.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Nelumbo nucifera] gi|720061733|ref|XP_010275266.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750 [Nelumbo nucifera]
          Length = 772

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = -1

Query: 240 QNLAVRFSKPGPNKNNEPSSPTDAEIVKWNKAISDHMRNGRCEAALHLFDTMPSRTTVSW 61
           +N+++R S  G +KN  PSS +DAE+VKWN  IS+HMRNG+C++ALHLF TMP RT+VSW
Sbjct: 32  KNVSLRSSNKGSSKN--PSSISDAEVVKWNMTISEHMRNGQCDSALHLFQTMPRRTSVSW 89

Query: 60  N 58
           N
Sbjct: 90  N 90


>ref|XP_008797547.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Phoenix dactylifera]
          Length = 778

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 36/68 (52%), Positives = 48/68 (70%)
 Frame = -1

Query: 258 NSNPSPQNLAVRFSKPGPNKNNEPSSPTDAEIVKWNKAISDHMRNGRCEAALHLFDTMPS 79
           +SN    N  +  +    NK  + S+ +DAEI++WNKAI+DHMR+GRC+AA  LFD MP 
Sbjct: 30  SSNAVKNNNNLGNNNTKKNKRRKNSATSDAEILRWNKAITDHMRHGRCDAAADLFDRMPR 89

Query: 78  RTTVSWNT 55
           R+TVSWNT
Sbjct: 90  RSTVSWNT 97


>ref|XP_010927442.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Elaeis guineensis]
          Length = 777

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 34/67 (50%), Positives = 48/67 (71%)
 Frame = -1

Query: 258 NSNPSPQNLAVRFSKPGPNKNNEPSSPTDAEIVKWNKAISDHMRNGRCEAALHLFDTMPS 79
           +S+ +  N  +  +KP  NK  + S+ +DAEI++WNK I+DHMR+GRC+ A  LF  MPS
Sbjct: 29  SSSNAVNNNNLSNNKPKKNKRRDNSATSDAEILRWNKIITDHMRHGRCDFAADLFYRMPS 88

Query: 78  RTTVSWN 58
           R+TVSWN
Sbjct: 89  RSTVSWN 95


>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 766

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 30/54 (55%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -1

Query: 207 PNKNNEP----SSPTDAEIVKWNKAISDHMRNGRCEAALHLFDTMPSRTTVSWN 58
           P+  N+P    S  TDA+IVKWN AI++HMRNG+C++AL LF++MP R+++SWN
Sbjct: 31  PSTRNQPKTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWN 84


>ref|XP_002534168.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525755|gb|EEF28217.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 513

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
 Frame = -1

Query: 249 PSPQNLAVRFSKPGPNKNNEPSSPTDAEIVKWNKAISDHMRNGRCEAALHLFDTMPSRTT 70
           PS + L  +F +      NE    TD++IV WN AI+ HMRNG+C +AL +F+TMP R+T
Sbjct: 33  PSKKELTQKFKQ----SKNESEKTTDSDIVNWNMAITTHMRNGQCHSALQVFNTMPRRST 88

Query: 69  VSWNTP*YPDGPTRTGR------LFDKM 4
           V++N      G    GR      +FDKM
Sbjct: 89  VTYNA--MISGYLSNGRFDLAREMFDKM 114


>ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = -1

Query: 198 NNEPSSPTDAEIVKWNKAISDHMRNGRCEAALHLFDTMPSRTTVSWN 58
           NN      D +I+KWNKAIS HMRNG C++ALH+F+TMP R++VS+N
Sbjct: 38  NNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYN 84


>gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
           gi|657376304|gb|AET05560.2| pentatricopeptide (PPR)
           repeat protein [Medicago truncatula]
          Length = 766

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = -1

Query: 198 NNEPSSPTDAEIVKWNKAISDHMRNGRCEAALHLFDTMPSRTTVSWN 58
           NN      D +I+KWNKAIS HMRNG C++ALH+F+TMP R++VS+N
Sbjct: 38  NNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYN 84


>ref|XP_004503293.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Cicer arietinum]
          Length = 763

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 29/50 (58%), Positives = 40/50 (80%)
 Frame = -1

Query: 207 PNKNNEPSSPTDAEIVKWNKAISDHMRNGRCEAALHLFDTMPSRTTVSWN 58
           PN N +P+   D +I+KWNKAIS HMRNG C++ALH+F+ MP R++VS+N
Sbjct: 33  PNNNIKPNVK-DPDILKWNKAISTHMRNGHCDSALHVFNNMPRRSSVSYN 81


>ref|XP_011084409.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Sesamum indicum]
          Length = 772

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = -1

Query: 279 LQKRLVGNSNPSPQNLAVRFSKPGPNKNN---EPSSPTDAEIVKWNKAISDHMRNGRCEA 109
           L+ R   ++   P+  A  F KP  NK+      +  TD++IVK N AI+DHMR+G+C++
Sbjct: 14  LRNRTRTDAQTPPRQNAGEFFKPPTNKSLPKLRSNKFTDSDIVKCNIAITDHMRHGQCDS 73

Query: 108 ALHLFDTMPSRTTVSWNT 55
           AL LF++MP +T+VS+NT
Sbjct: 74  ALRLFNSMPRKTSVSYNT 91


>ref|XP_012853250.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Erythranthe guttatus]
          Length = 773

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = -1

Query: 258 NSNPSPQNLAVRFSKPGPNKNNEPSSP-TDAEIVKWNKAISDHMRNGRCEAALHLFDTMP 82
           ++ P  QN+   F  P        S+  TD++IVK N AI++HMR+G+CE AL LF++MP
Sbjct: 24  SAKPPRQNIRDFFEPPTDQSKPRSSNRFTDSDIVKCNIAITNHMRSGQCEQALRLFNSMP 83

Query: 81  SRTTVSWNT 55
            RTTVS+NT
Sbjct: 84  RRTTVSYNT 92


>ref|XP_010031274.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Eucalyptus grandis]
          Length = 779

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 28/53 (52%), Positives = 40/53 (75%)
 Frame = -1

Query: 216 KPGPNKNNEPSSPTDAEIVKWNKAISDHMRNGRCEAALHLFDTMPSRTTVSWN 58
           K GP + +  +S   A ++KWN AI+ HMR+G+CEAAL +FD+MP R+TVS+N
Sbjct: 44  KSGPKRKSRVASEVPA-VIKWNMAITSHMRSGQCEAALRVFDSMPCRSTVSYN 95


>ref|XP_007160512.1| hypothetical protein PHAVU_002G328100g [Phaseolus vulgaris]
           gi|561033927|gb|ESW32506.1| hypothetical protein
           PHAVU_002G328100g [Phaseolus vulgaris]
          Length = 783

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
 Frame = -1

Query: 258 NSNPSPQNLAVRFSKPGPNKNNEPSSPTDAEIVKWNKAISDHMRNGRCEAALHLFDTMPS 79
           NS  S +    R S+             D +IV WNKAIS HMRNG C++AL +F++MP 
Sbjct: 35  NSYRSKRRSRSRSSESSSTTTTNSVKVKDPDIVTWNKAISSHMRNGYCDSALRVFNSMPR 94

Query: 78  RTTVSWNTP*YPDGPTRTGR------LFDKM 4
           R++VS+N      G  R  R      LFDKM
Sbjct: 95  RSSVSYNA--MISGYLRNARFSLARDLFDKM 123


>gb|KDO62894.1| hypothetical protein CISIN_1g004024mg [Citrus sinensis]
          Length = 778

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 28/67 (41%), Positives = 45/67 (67%)
 Frame = -1

Query: 258 NSNPSPQNLAVRFSKPGPNKNNEPSSPTDAEIVKWNKAISDHMRNGRCEAALHLFDTMPS 79
           N+NP P    ++      ++N +P    D +I +WN AI+ HMRNG C++ALH+F++MP 
Sbjct: 31  NTNPYPSKKTLKRHLNSKSRN-KPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPR 89

Query: 78  RTTVSWN 58
           R++VS+N
Sbjct: 90  RSSVSYN 96


>ref|XP_006490750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Citrus sinensis]
          Length = 778

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 28/67 (41%), Positives = 45/67 (67%)
 Frame = -1

Query: 258 NSNPSPQNLAVRFSKPGPNKNNEPSSPTDAEIVKWNKAISDHMRNGRCEAALHLFDTMPS 79
           N+NP P    ++      ++N +P    D +I +WN AI+ HMRNG C++ALH+F++MP 
Sbjct: 31  NTNPYPSKKTLKRHLNSKSRN-KPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPR 89

Query: 78  RTTVSWN 58
           R++VS+N
Sbjct: 90  RSSVSYN 96


>gb|KHN21662.1| Pentatricopeptide repeat-containing protein [Glycine soja]
          Length = 1526

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
 Frame = -1

Query: 222  FSKPGPNKNNEPSSPT--DAEIVKWNKAISDHMRNGRCEAALHLFDTMPSRTTVSWNTP* 49
            +SK     +  PSS    D +IV WNKAIS HMRNG C++AL +F++MP R++VS+N   
Sbjct: 788  WSKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNA-- 845

Query: 48   YPDGPTRTGR------LFDKM 4
               G  R  +      LFDKM
Sbjct: 846  MISGYLRNAKFSLARDLFDKM 866


>ref|XP_003524346.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 769

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
 Frame = -1

Query: 219 SKPGPNKNNEPSSPT--DAEIVKWNKAISDHMRNGRCEAALHLFDTMPSRTTVSWNTP*Y 46
           SK     +  PSS    D +IV WNKAIS HMRNG C++AL +F++MP R++VS+N    
Sbjct: 32  SKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNA--M 89

Query: 45  PDGPTRTGR------LFDKM 4
             G  R  +      LFDKM
Sbjct: 90  ISGYLRNAKFSLARDLFDKM 109


>ref|XP_008453471.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Cucumis melo]
          Length = 776

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 30/71 (42%), Positives = 47/71 (66%)
 Frame = -1

Query: 270 RLVGNSNPSPQNLAVRFSKPGPNKNNEPSSPTDAEIVKWNKAISDHMRNGRCEAALHLFD 91
           R   NS+PS +    +      +KN +P+   D++IVKWN+ IS +MR G+CE+AL +F+
Sbjct: 30  RASSNSSPSKKTWTQKLE----SKNTDPTI-VDSDIVKWNRKISAYMRKGQCESALSVFN 84

Query: 90  TMPSRTTVSWN 58
            MP R+TV++N
Sbjct: 85  GMPRRSTVTYN 95


>ref|XP_007151411.1| hypothetical protein PHAVU_004G044000g, partial [Phaseolus
           vulgaris] gi|561024720|gb|ESW23405.1| hypothetical
           protein PHAVU_004G044000g, partial [Phaseolus vulgaris]
          Length = 951

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 13/80 (16%)
 Frame = -1

Query: 204 NKNNEPSSPT-------DAEIVKWNKAISDHMRNGRCEAALHLFDTMPSRTTVSWNTP*Y 46
           +++NE SS T       D +IV WNKAIS HMRNG C++AL +F++MP  ++VS+N    
Sbjct: 215 SRSNESSSTTTNSVKVKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRWSSVSYNA--M 272

Query: 45  PDGPTRTGR------LFDKM 4
             G  R  +      LFDKM
Sbjct: 273 ISGYLRNAKFSLARDLFDKM 292


>ref|XP_011039111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Populus euphratica]
          Length = 771

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = -1

Query: 258 NSNPSPQNLAVRFSKPGPNKNNEPSSPTDAEIVKWNKAISDHMRNGRCEAALHLFDTMPS 79
           ++ P   N + + S        +  S TD++IVKWN AI+ HMRNG CE+AL +F++M  
Sbjct: 23  SAKPKNSNSSKKTSTSQKTAKLQNLSTTDSDIVKWNIAITTHMRNGLCESALRVFNSMSR 82

Query: 78  RTTVSWN 58
           R++VS+N
Sbjct: 83  RSSVSYN 89


>ref|XP_010087050.1| hypothetical protein L484_012294 [Morus notabilis]
           gi|703163100|ref|XP_010113226.1| hypothetical protein
           L484_000356 [Morus notabilis]
           gi|587835092|gb|EXB25868.1| hypothetical protein
           L484_012294 [Morus notabilis]
           gi|587990941|gb|EXC75162.1| hypothetical protein
           L484_000356 [Morus notabilis]
          Length = 773

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = -1

Query: 279 LQKRLVGNSNPSP-QNLAVRFSKPGPNKNNEPSSPTDAEIVKWNKAISDHMRNGRCEAAL 103
           LQ + +    P+P  +      K  P KN + S+  D++IV+WN  I+ HMRNG C+AAL
Sbjct: 18  LQTQTINGKLPNPIPSKKTLIEKHNPKKNKK-SNIADSDIVQWNMDITSHMRNGHCKAAL 76

Query: 102 HLFDTMPSRTTVSWN 58
            +F+ M  R+ VS+N
Sbjct: 77  RVFNDMSRRSVVSYN 91


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