BLASTX nr result

ID: Cinnamomum23_contig00032356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00032356
         (353 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637074.1| Cell wall-associated hydrolase, partial [Med...    50   2e-07
gb|ACU24411.1| unknown [Glycine max]                                   55   1e-06
gb|ABR26094.1| retrotransposon protein [Oryza sativa Indica Group]     59   2e-06

>ref|XP_003637074.1| Cell wall-associated hydrolase, partial [Medicago truncatula]
          Length = 733

 Score = 50.4 bits (119), Expect(2) = 2e-07
 Identities = 28/46 (60%), Positives = 30/46 (65%)
 Frame = +2

Query: 74  LVPLHFRRKNT*PVSCYALFKRWLLPGKLPGYLGTLTSFNT*SSFR 211
           L P+H +RK    VS YALFK WLL GK PG L T TSF T  SFR
Sbjct: 378 LSPVHLQRKGARSVSYYALFKGWLLLGKPPGCLCTPTSFITERSFR 423



 Score = 30.8 bits (68), Expect(2) = 2e-07
 Identities = 14/22 (63%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = +1

Query: 22  CTTLSYR-VIYSHSFGRRLSPI 84
           C TL YR ++ SHSFGR LSP+
Sbjct: 360 CGTLPYRCILTSHSFGRSLSPV 381


>gb|ACU24411.1| unknown [Glycine max]
          Length = 64

 Score = 55.1 bits (131), Expect(2) = 1e-06
 Identities = 30/49 (61%), Positives = 34/49 (69%)
 Frame = +2

Query: 74  LVPLHFRRKNT*PVSCYALFKRWLLPGKLPGYLGTLTSFNT*SSFRGLN 220
           L P+H RRK+   VS YALF+ WLL GK PG L T TSF T  SFRGL+
Sbjct: 15  LSPVHLRRKSARSVSYYALFQGWLLLGKPPGCLCTPTSFITERSFRGLS 63



 Score = 23.9 bits (50), Expect(2) = 1e-06
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 52 SHSFGRRLSPI 84
          SHSFGR LSP+
Sbjct: 8  SHSFGRSLSPV 18


>gb|ABR26094.1| retrotransposon protein [Oryza sativa Indica Group]
          Length = 109

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 31/46 (67%), Positives = 34/46 (73%)
 Frame = -3

Query: 261 DKRVAQKGNSPDH*LRPLNDD*VLKEVRVPR*PGSLPGSSHLLKSA 124
           DK   ++GNSPDH LRPLND  V+KEV V R PG LP SSH LKSA
Sbjct: 64  DKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA 109


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