BLASTX nr result
ID: Cinnamomum23_contig00032356
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cinnamomum23_contig00032356 (353 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003637074.1| Cell wall-associated hydrolase, partial [Med... 50 2e-07 gb|ACU24411.1| unknown [Glycine max] 55 1e-06 gb|ABR26094.1| retrotransposon protein [Oryza sativa Indica Group] 59 2e-06 >ref|XP_003637074.1| Cell wall-associated hydrolase, partial [Medicago truncatula] Length = 733 Score = 50.4 bits (119), Expect(2) = 2e-07 Identities = 28/46 (60%), Positives = 30/46 (65%) Frame = +2 Query: 74 LVPLHFRRKNT*PVSCYALFKRWLLPGKLPGYLGTLTSFNT*SSFR 211 L P+H +RK VS YALFK WLL GK PG L T TSF T SFR Sbjct: 378 LSPVHLQRKGARSVSYYALFKGWLLLGKPPGCLCTPTSFITERSFR 423 Score = 30.8 bits (68), Expect(2) = 2e-07 Identities = 14/22 (63%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Frame = +1 Query: 22 CTTLSYR-VIYSHSFGRRLSPI 84 C TL YR ++ SHSFGR LSP+ Sbjct: 360 CGTLPYRCILTSHSFGRSLSPV 381 >gb|ACU24411.1| unknown [Glycine max] Length = 64 Score = 55.1 bits (131), Expect(2) = 1e-06 Identities = 30/49 (61%), Positives = 34/49 (69%) Frame = +2 Query: 74 LVPLHFRRKNT*PVSCYALFKRWLLPGKLPGYLGTLTSFNT*SSFRGLN 220 L P+H RRK+ VS YALF+ WLL GK PG L T TSF T SFRGL+ Sbjct: 15 LSPVHLRRKSARSVSYYALFQGWLLLGKPPGCLCTPTSFITERSFRGLS 63 Score = 23.9 bits (50), Expect(2) = 1e-06 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 Query: 52 SHSFGRRLSPI 84 SHSFGR LSP+ Sbjct: 8 SHSFGRSLSPV 18 >gb|ABR26094.1| retrotransposon protein [Oryza sativa Indica Group] Length = 109 Score = 58.5 bits (140), Expect = 2e-06 Identities = 31/46 (67%), Positives = 34/46 (73%) Frame = -3 Query: 261 DKRVAQKGNSPDH*LRPLNDD*VLKEVRVPR*PGSLPGSSHLLKSA 124 DK ++GNSPDH LRPLND V+KEV V R PG LP SSH LKSA Sbjct: 64 DKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA 109