BLASTX nr result

ID: Cinnamomum23_contig00031918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00031918
         (425 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]   102   5e-28
gb|AFW86910.1| putative cytochrome C oxidase subunit II family p...   121   2e-25
tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II fa...    99   8e-19
gb|ERM95510.1| hypothetical protein AMTR_s00151p00074930 [Ambore...    82   8e-15

>emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]
          Length = 201

 Score =  102 bits (254), Expect(2) = 5e-28
 Identities = 46/54 (85%), Positives = 46/54 (85%)
 Frame = -3

Query: 249 VAYNFGPNGRPRNLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXLRFGDGGPT 88
           VAYNFGPNGRP NLSEWGIPVGNNHGSSCGTTGPGEDN       LRFGDGGPT
Sbjct: 55  VAYNFGPNGRPSNLSEWGIPVGNNHGSSCGTTGPGEDNLLFLLLFLRFGDGGPT 108



 Score = 48.5 bits (114), Expect(2) = 5e-28
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -2

Query: 424 VVRPIPRNAPSIGAYGSILVVAG 356
           VVRPIPRNAPSIGAYGSILVVAG
Sbjct: 32  VVRPIPRNAPSIGAYGSILVVAG 54


>gb|AFW86910.1| putative cytochrome C oxidase subunit II family protein [Zea mays]
          Length = 70

 Score =  121 bits (304), Expect = 2e-25
 Identities = 62/70 (88%), Positives = 63/70 (90%)
 Frame = -1

Query: 296 MSDNGAEVVNLSAPQQWHTTLDLTAGPVTFRNGGSPLATTTVVVAELLGRERTTXXXXXS 117
           MSDNGA VVNLSAPQQWHTTLDL AGPVTFRNGGSPLATTTVVVAELLG+ERTT     S
Sbjct: 1   MSDNGASVVNLSAPQQWHTTLDLRAGPVTFRNGGSPLATTTVVVAELLGQERTTCCSCSS 60

Query: 116 FFASGTEVLR 87
           FFASGTEVLR
Sbjct: 61  FFASGTEVLR 70


>tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II family protein [Zea
           mays]
          Length = 510

 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 47/60 (78%), Positives = 47/60 (78%)
 Frame = -3

Query: 258 TTAVAYNFGPNGRPRNLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXLRFGDGGPTVGN 79
           T AVAYNFGP GRPR LSEWGIPVGNNHGSSCGTTGP EDN       LRFGDGG TV N
Sbjct: 357 TGAVAYNFGPKGRPRYLSEWGIPVGNNHGSSCGTTGPREDNLLFLLLLLRFGDGGHTVSN 416


>gb|ERM95510.1| hypothetical protein AMTR_s00151p00074930 [Amborella trichopoda]
          Length = 160

 Score = 81.6 bits (200), Expect(2) = 8e-15
 Identities = 37/51 (72%), Positives = 41/51 (80%)
 Frame = -3

Query: 213 NLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXLRFGDGGPTVGNSRHKHL 61
           +LS+WGIP+GNNHGSSC TTGPGE+N       LRFGDGGPTV NSRHK L
Sbjct: 87  DLSKWGIPIGNNHGSSCETTGPGEENQLFLVLCLRFGDGGPTVCNSRHKAL 137



 Score = 25.0 bits (53), Expect(2) = 8e-15
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -2

Query: 64  LDRRGPALLLL 32
           LDRRGPALLLL
Sbjct: 137 LDRRGPALLLL 147


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